Take our Survey

PDB Homolog: RRP40/YOL142W Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein RRP40/YOL142W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-06-05

10 PDB homolog(s) found for yeast gene RRP40/YOL142W

RRP40/YOL142W links
  • Locus Info
  • PDB protein structure(s) homologous to RRP40Homolog Source (per PDB)Protein Alignment: RRP40 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    4IFD ( Chain: G)
    Crystal Structure Of An 11-subunit Eukaryotic Exosome Complex Bound To Rna
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c3.8e-1271000View alignmentSCOP
    MMDB
    CATH
    2JA9 ( Chain: A)
    Structure Of The N-Terminal Deletion Of Yeast Exosome Component Rrp40
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.7e-901000View alignmentSCOP
    MMDB
    CATH
    2NN6 ( Chain: G)
    Structure Of The Human Rna Exosome Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.5e-273517View alignmentSCOP
    MMDB
    CATH
    2BA0 ( Chain: A, C, B)
    Archaeal Exosome Core
  • PDB_Info
  • PDB_Structure
  • Archaeoglobus fulgidusChain A = 6.3e-052522View alignmentSCOP
    MMDB
    CATH
    Chain C = 6.3e-052522View alignment
    Chain B = 6.3e-052522View alignment
    3L7Z ( Chain: I, C, F)
    Crystal Structure Of The S. Solfataricus Archaeal Exosome
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricusChain I = 0.0047002324View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0047002324View alignment
    Chain F = 0.0047002324View alignment
    2JEB ( Chain: I)
    Structure Of A 9-Subunit Archaeal Exosome Bound To Mn Ions
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0048002324View alignmentSCOP
    MMDB
    CATH
    4BA2 ( Chain: I)
    Archaeal Exosome (rrp4-rrp41(d182a)-rrp42) Bound To Inorganic Phosphate
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0048002324View alignmentSCOP
    MMDB
    CATH
    4BA1 ( Chain: I)
    Archaeal Exosome (rrp4-rrp41(d182a)-rrp42) Bound To Inorganic Phosphate
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0048002324View alignmentSCOP
    MMDB
    CATH
    2JEA ( Chain: I)
    Structure Of A 9-Subunit Archaeal Exosome Bound To Rna
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0048002324View alignmentSCOP
    MMDB
    CATH
    2JE6 ( Chain: I)
    Structure Of A 9-Subunit Archaeal Exosome
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0048002324View alignmentSCOP
    MMDB
    CATH

    Last updated on 2014-06-05