PDB Homolog: RRP40/YOL142W Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein RRP40/YOL142W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2016-09-15

15 PDB homolog(s) found for yeast gene RRP40/YOL142W

RRP40/YOL142W links
  • Locus Info
  • PDB protein structure(s) homologous to RRP40Homolog Source (per PDB)Protein Alignment: RRP40 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    5JEA ( Chain: G)
    Structure Of A Cytoplasmic 11-subunit Rna Exosome Complex Including Ski7, Bound To Rna
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c4.7e-1271000View alignmentSCOP
    MMDB
    CATH
    5G06 ( Chain: G)
    Cryo-em Structure Of Yeast Cytoplasmic Exosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae4.7e-1271000View alignmentSCOP
    MMDB
    CATH
    4IFD ( Chain: G)
    Crystal Structure Of An 11-subunit Eukaryotic Exosome Complex Bound To Rna
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c4.7e-1271000View alignmentSCOP
    MMDB
    CATH
    4OO1 ( Chain: G)
    Structure Of An Rrp6-rna Exosome Complex Bound To Poly(a) Rna
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c4.7e-1271000View alignmentSCOP
    MMDB
    CATH
    5C0X ( Chain: G)
    Structure Of A 12-subunit Nuclear Exosome Complex Bound To Structured Rna
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c4.7e-1271000View alignmentSCOP
    MMDB
    CATH
    5C0W ( Chain: G)
    Structure Of A 12-subunit Nuclear Exosome Complex Bound To Single- Stranded Rna Substrates
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c4.7e-1271000View alignmentSCOP
    MMDB
    CATH
    2JA9 ( Chain: A)
    Structure Of The N-Terminal Deletion Of Yeast Exosome Component Rrp40
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.2e-901000View alignmentSCOP
    MMDB
    CATH
    2NN6 ( Chain: G)
    Structure Of The Human Rna Exosome Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.9e-273517View alignmentSCOP
    MMDB
    CATH
    2BA0 ( Chain: C, A, B)
    Archaeal Exosome Core
  • PDB_Info
  • PDB_Structure
  • Archaeoglobus fulgidusChain C = 8.0e-052522View alignmentSCOP
    MMDB
    CATH
    Chain A = 8.0e-052522View alignment
    Chain B = 8.0e-052522View alignment
    3L7Z ( Chain: I, F, C)
    Crystal Structure Of The S. Solfataricus Archaeal Exosome
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricusChain I = 0.0059992324View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0059992324View alignment
    Chain C = 0.0059992324View alignment
    4BA1 ( Chain: I)
    Archaeal Exosome (rrp4-rrp41(d182a)-rrp42) Bound To Inorganic Phosphate
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0061022324View alignmentSCOP
    MMDB
    CATH
    2JEA ( Chain: I)
    Structure Of A 9-Subunit Archaeal Exosome Bound To Rna
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0061022324View alignmentSCOP
    MMDB
    CATH
    2JE6 ( Chain: I)
    Structure Of A 9-Subunit Archaeal Exosome
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0061022324View alignmentSCOP
    MMDB
    CATH
    2JEB ( Chain: I)
    Structure Of A 9-Subunit Archaeal Exosome Bound To Mn Ions
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0061022324View alignmentSCOP
    MMDB
    CATH
    4BA2 ( Chain: I)
    Archaeal Exosome (rrp4-rrp41(d182a)-rrp42) Bound To Inorganic Phosphate
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus0.0061022324View alignmentSCOP
    MMDB
    CATH

    Last updated on 2016-09-15