PDB Homolog: RPL13B/YMR142C Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein RPL13B/YMR142C. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-12-05

61 PDB homolog(s) found for yeast gene RPL13B/YMR142C

RPL13B/YMR142C links
  • Locus Info
  • PDB protein structure(s) homologous to RPL13BHomolog Source (per PDB)Protein Alignment: RPL13B vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    4B6A ( Chain: L)
    Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex With Arx1 And Rei1
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c2.3e-99990View alignmentSCOP
    MMDB
    CATH
    3U5I ( Chain: L)
    The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 60s Subunit, Ribosome B
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c2.3e-99990View alignmentSCOP
    MMDB
    CATH
    3U5E ( Chain: L)
    The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 60s Subunit, Ribosome A
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c2.3e-99990View alignmentSCOP
    MMDB
    CATH
    1VXY ( Chain: M)
    Structures Of Yeast 80s Ribosome-trna Complexes In The Rotated And Non-rotated Conformations (class I - Non-rotated Ribosome With 2 Trnas, This Entry Contains The Large Ribosomal Subunit Proteins)
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.3e-99990View alignmentSCOP
    MMDB
    CATH
    3J65 ( Chain: K)
    Arx1 Pre-60s Particle. This Entry Contains The R-proteins And Biogenesis Factors.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.3e-99990View alignmentSCOP
    MMDB
    CATH
    1VWU ( Chain: M)
    S. Cerevisiae 80s Ribosome Bound With Taura Syndrome Virus (tsv) Ires, 2 Degree Rotation (class I). This Entry Contains The Large Subunit Ribosomal Proteins.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae W3032.3e-99990View alignmentSCOP
    MMDB
    CATH
    1VW8 ( Chain: M)
    S. Cerevisiae 80s Ribosome Bound With Taura Syndrome Virus (tsv) Ires, 5 Degree Rotation (class Ii). This Entry Contains The Large Subunit Ribosomal Proteins.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae W3032.3e-99990View alignmentSCOP
    MMDB
    CATH
    4CUW ( Chain: L)
    Kluyveromyces Lactis 80s Ribosome In Complex With Crpv-ires
  • PDB_Info
  • PDB_Structure
  • Kluyveromyces lactis2.3e-99990View alignmentSCOP
    MMDB
    CATH
    1VXV ( Chain: M)
    Structures Of Yeast 80s Ribosome-trna Complexes In The Rotated And Non-rotated Conformations (class Ii - Rotated Ribosome With 1 Trna, This Entry Contains The Large Ribosomal Subunit Proteins)
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.3e-99990View alignmentSCOP
    MMDB
    CATH
    4UJY ( Chain: C)
    Crystal Structure Of T-2 Toxin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UK0 ( Chain: N)
    Crystal Structure Of Anisomycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UK3 ( Chain: D)
    Crystal Structure Of Anisomycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UK5 ( Chain: N)
    Crystal Structure Of Cca Trinucleotide Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UK8 ( Chain: D)
    Crystal Structure Of Cca Trinucleotide Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKA ( Chain: N)
    Crystal Structure Of Cycloheximide Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKE ( Chain: D)
    Crystal Structure Of Cycloheximide Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKG ( Chain: N)
    Crystal Structure Of Blasticidin S Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKJ ( Chain: C)
    Crystal Structure Of Blasticidin S Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKL ( Chain: N)
    Crystal Structure Of Cryptopleurine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKO ( Chain: C)
    Crystal Structure Of Cryptopleurine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKQ ( Chain: N)
    Crystal Structure Of Deoxynivalenol Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UJV ( Chain: N)
    Crystal Structure Of T-2 Toxin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UJT ( Chain: D)
    Crystal Structure Of Lactimidomycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UJQ ( Chain: N)
    Crystal Structure Of Lactimidomycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UJO ( Chain: D)
    Crystal Structure Of Lycorine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UJL ( Chain: N)
    Crystal Structure Of Lycorine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UJJ ( Chain: D)
    Crystal Structure Of Narciclasine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UJG ( Chain: N)
    Crystal Structure Of Narciclasine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4BYU ( Chain: L)
    Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4BYN ( Chain: L)
    Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKT ( Chain: D)
    Crystal Structure Of Deoxynivalenol Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4ULT ( Chain: C)
    Crystal Structure Of Verrucarin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4ULQ ( Chain: N)
    Crystal Structure Of Verrucarin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4ULO ( Chain: D)
    Crystal Structure Of Phyllanthoside Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4ULK ( Chain: N)
    Crystal Structure Of Phyllanthoside Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4ULI ( Chain: D)
    Crystal Structure Of Pactamycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4ULF ( Chain: N)
    Crystal Structure Of Pactamycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4ULD ( Chain: D)
    Crystal Structure Of Nagilactone C Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4ULA ( Chain: N)
    Crystal Structure Of Nagilactone C Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UL8 ( Chain: D)
    Crystal Structure Of Homoharringtonine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UL5 ( Chain: N)
    Crystal Structure Of Homoharringtonine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UL3 ( Chain: D)
    Crystal Structure Of Geneticin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UL0 ( Chain: N)
    Crystal Structure Of Geneticin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKY ( Chain: D)
    Crystal Structure Of Edeine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4UKV ( Chain: N)
    Crystal Structure Of Edeine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c7.9e-99990View alignmentSCOP
    MMDB
    CATH
    4W20 ( Chain: L)
    Structure Of The Mammalian 60s Ribosomal Subunit (this Entry Contains The Large Ribosomal Proteins)
  • PDB_Info
  • PDB_Structure
  • Sus scrofa6.8e-455116View alignmentSCOP
    MMDB
    CATH
    4W22 ( Chain: L)
    Structure Of The 80s Mammalian Ribosome Bound To Eef2 (this Entry Contains The Large Ribosomal Subunit Proteins)
  • PDB_Info
  • PDB_Structure
  • Sus scrofa6.8e-455116View alignmentSCOP
    MMDB
    CATH
    4W25 ( Chain: L)
    Structure Of The Idle Mammalian Ribosome-sec61 Complex (this Entry Contains The Large Ribosomal Subunit Proteins)
  • PDB_Info
  • PDB_Structure
  • Sus scrofa6.8e-455116View alignmentSCOP
    MMDB
    CATH
    4W27 ( Chain: L)
    Structure Of The Translating Mammalian Ribosome-sec61 Complex (this Entry Contains The Large Ribosomal Subunit Proteins)
  • PDB_Info
  • PDB_Structure
  • Sus scrofa6.8e-455116View alignmentSCOP
    MMDB
    CATH
    3J3B ( Chain: L)
    Structure Of The Human 60s Ribosomal Proteins
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.4e-444918View alignmentSCOP
    MMDB
    CATH
    4CXD ( Chain: L)
    Regulation Of The Mammalian Elongation Cycle By 40s Subunit Rolling: A Eukaryotic-specific Ribosome Rearrangement
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculus1.4e-444918View alignmentSCOP
    MMDB
    CATH
    4UPX ( Chain: L)
    Mammalian 80s Hcv-ires Initiation Complex With Eif5b Pre-like State
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculus1.4e-444918View alignmentSCOP
    MMDB
    CATH
    4UQ1 ( Chain: L)
    Mammalian 80s Hcv-ires Initiation Complex With Eif5b Post-like State
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculus1.4e-444918View alignmentSCOP
    MMDB
    CATH
    3J61 ( Chain: L)
    Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Triticum aestivum3.3e-384715View alignmentSCOP
    MMDB
    CATH
    3J39 ( Chain: L)
    Structure Of The D. Melanogaster 60s Ribosomal Proteins
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster3.7e-374615View alignmentSCOP
    MMDB
    CATH
    4A18 ( Chain: U)
    T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1
  • PDB_Info
  • PDB_Structure
  • Tetrahymena thermophila5.7e-344319View alignmentSCOP
    MMDB
    CATH
    4A1B ( Chain: U)
    T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3.
  • PDB_Info
  • PDB_Structure
  • Tetrahymena thermophila5.7e-344319View alignmentSCOP
    MMDB
    CATH
    4A1D ( Chain: U)
    T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4.
  • PDB_Info
  • PDB_Structure
  • Tetrahymena thermophila5.7e-344319View alignmentSCOP
    MMDB
    CATH
    4A19 ( Chain: U)
    T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 2.
  • PDB_Info
  • PDB_Structure
  • Tetrahymena thermophila5.7e-344319View alignmentSCOP
    MMDB
    CATH
    3ZF7 ( Chain: N)
    High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome
  • PDB_Info
  • PDB_Structure
  • Trypanosoma brucei brucei TREU9271.7e-324214View alignmentSCOP
    MMDB
    CATH
    1VX7 ( Chain: L)
    Cryo-em Structure Of The Plasmodium Falciparum 80s Ribosome Bound To The Anti-protozoan Drug Emetine, Large Subunit (protein Only)
  • PDB_Info
  • PDB_Structure
  • Plasmodium falciparum 3D71.1e-233221View alignmentSCOP
    MMDB
    CATH

    Last updated on 2014-12-05