PDB Homolog: SHM2/YLR058C Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein SHM2/YLR058C. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-06-05

64 PDB homolog(s) found for yeast gene SHM2/YLR058C

SHM2/YLR058C links
  • Locus Info
  • PDB protein structure(s) homologous to SHM2Homolog Source (per PDB)Protein Alignment: SHM2 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    1LS3 ( Chain: B, D, A, C)
    Crystal Structure Of The Complex Between Rabbit Cytosolic Serine Hydroxymethyltransferase And Triglu-5-formyl-tetrahydrofolate
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculusChain B = 5.8e-1455718View alignmentSCOP
    MMDB
    CATH
    Chain D = 5.8e-1455718View alignment
    Chain A = 5.8e-1455718View alignment
    Chain C = 5.8e-1455718View alignment
    1CJ0 ( Chain: B, A)
    Crystal Structure Of Rabbit Cytosolic Serine Hydroxymethyltransferase At 2.8 Angstrom Resolution
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculusChain B = 7.5e-1455718View alignmentSCOP
    MMDB
    CATH
    Chain A = 7.5e-1455718View alignment
    1RVY ( Chain: B, A)
    E75q Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase, Complex With Glycine
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculusChain B = 1.1e-1445718View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.1e-1445718View alignment
    1RVU ( Chain: B, A)
    E75q Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculusChain B = 1.1e-1445718View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.1e-1445718View alignment
    1RV4 ( Chain: A, B)
    E75l Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculusChain A = 4.2e-1445718View alignmentSCOP
    MMDB
    CATH
    Chain B = 4.2e-1445718View alignment
    1RV3 ( Chain: A, B)
    E75l Mutant Of Rabbit Cytosolic Serine Hydroxymethyltransferase, Complex With Glycine
  • PDB_Info
  • PDB_Structure
  • Oryctolagus cuniculusChain A = 4.2e-1445718View alignmentSCOP
    MMDB
    CATH
    Chain B = 4.2e-1445718View alignment
    1EJI ( Chain: D, A, B, C)
    Recombinant Serine Hydroxymethyltransferase (Mouse)
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain D = 1.5e-1415617View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.5e-1415617View alignment
    Chain B = 1.5e-1415617View alignment
    Chain C = 1.5e-1415617View alignment
    1BJ4 ( Chain: A)
    Recombinant Serine Hydroxymethyltransferase (human)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens8.0e-1415519View alignmentSCOP
    MMDB
    CATH
    3OU5 ( Chain: A)
    Human Mitochondrial Serine Hydroxymethyltransferase 2
  • PDB_Info
  • PDB_Structure
  • Homo sapiens8.3e-1395620View alignmentSCOP
    MMDB
    CATH
    2DKJ ( Chain: A, B)
    Crystal Structure Of T.Th.Hb8 Serine Hydroxymethyltransferase
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilus HB8Chain A = 2.6e-874717View alignmentSCOP
    MMDB
    CATH
    Chain B = 2.6e-874717View alignment
    1DFO ( Chain: C, B, D, A)
    Crystal Structure At 2.4 Angstrom Resolution Of E. Coli Serine Hydroxymethyltransferase In Complex With Glycine And 5-Formyl Tetrahydrofolate
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain C = 1.3e-854716View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.3e-854716View alignment
    Chain D = 1.3e-854716View alignment
    Chain A = 1.3e-854716View alignment
    4N0W ( Chain: D, C, B, A)
    X-ray Crystal Structure Of A Serine Hydroxymethyltransferase From Burkholderia Cenocepacia With Covalently Attached Pyridoxal Phosphate
  • PDB_Info
  • PDB_Structure
  • Burkholderia cenocepacia J2315Chain D = 2.0e-854416View alignmentSCOP
    MMDB
    CATH
    Chain C = 2.0e-854416View alignment
    Chain B = 2.0e-854416View alignment
    Chain A = 2.0e-854416View alignment
    4MSO ( Chain: A, B)
    X-ray Crystal Structure Of A Serine Hydroxymethyl Transferase In Apo Form From Burkholderia Cenocepacia
  • PDB_Info
  • PDB_Structure
  • Burkholderia cenocepacia J2315Chain A = 2.7e-854416View alignmentSCOP
    MMDB
    CATH
    Chain B = 2.7e-854416View alignment
    4OT8 ( Chain: A, B, C, D)
    X-ray Crystal Structure Of Serine Hydroxymethyl Transferase From Burkholderia Cenocepacia Bound To Plp And Serine
  • PDB_Info
  • PDB_Structure
  • Burkholderia cenocepacia J2315Chain A = 2.7e-854416View alignmentSCOP
    MMDB
    CATH
    Chain B = 2.7e-854416View alignment
    Chain C = 2.7e-854416View alignment
    Chain D = 2.7e-854416View alignment
    4OTL ( Chain: A, B, C, D)
    X-ray Crystal Structure Of Serine Hydroxymethyl Transferase From Burkholderia Cenocepacia Bound To Plp And Glycine
  • PDB_Info
  • PDB_Structure
  • Burkholderia cenocepacia J2315Chain A = 2.7e-854416View alignmentSCOP
    MMDB
    CATH
    Chain B = 2.7e-854416View alignment
    Chain C = 2.7e-854416View alignment
    Chain D = 2.7e-854416View alignment
    1EQB ( Chain: A, B, D, C)
    X-ray Crystal Structure At 2.7 Angstroms Resolution Of Ternary Complex Between The Y65f Mutant Of E-coli Serine Hydroxymethyltransferase, Glycine And 5-formyl Tetrahydrofolate
  • PDB_Info
  • PDB_Structure
  • Escherichia coliChain A = 3.4e-854617View alignmentSCOP
    MMDB
    CATH
    Chain B = 3.4e-854617View alignment
    Chain D = 3.4e-854617View alignment
    Chain C = 3.4e-854617View alignment
    3G8M ( Chain: A)
    Serine Hydroxymethyltransferase Y55f Mutant
  • PDB_Info
  • PDB_Structure
  • Escherichia coli K-123.4e-854617View alignmentSCOP
    MMDB
    CATH
    1KKJ ( Chain: A)
    Crystal Structure Of Serine Hydroxymethyltransferase From B.Stearothermophilus
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-844618View alignmentSCOP
    MMDB
    CATH
    1KKP ( Chain: A)
    Crystal Structure Of Serine Hydroxymethyltransferase Complexed With Serine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-844618View alignmentSCOP
    MMDB
    CATH
    1KL2 ( Chain: B, A)
    Crystal Structure Of Serine Hydroxymethyltransferase Complexed With Glycine And 5-formyl Tetrahydrofolate
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilusChain B = 1.1e-844618View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.1e-844618View alignment
    1KL1 ( Chain: A)
    Crystal Structure Of Serine Hydroxymethyltransferase Complexed With Glycine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-844618View alignmentSCOP
    MMDB
    CATH
    2VGT ( Chain: A)
    Crystal Structure Of E53qbsshmt With Glycine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VGS ( Chain: A)
    Crystal Structure Of E53qbsshmt Internal Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VI9 ( Chain: A)
    Crystal Structure Of S172absshmt Glycine External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VIA ( Chain: A)
    Crystal Structure Of S172absshmt L-Serine External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VGV ( Chain: A)
    Crystal Structure Of E53qbsshmt Obtained In The Presence Of L-Allo-Threonine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VI8 ( Chain: A)
    Crystal Structure Of S172absshmt Internal Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VGU ( Chain: A)
    Crystal Structure Of E53qbsshmt With L-Serine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VGW ( Chain: A)
    Crystal Structure Of E53qbsshmt Obtained In The Presence Of Glycine And 5-Fomyl Tetrahydrofolate
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VIB ( Chain: A)
    Crystal Structure Of S172absshmt Obtained In The Presence Of L-Allo-Thr
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus2.3e-844618View alignmentSCOP
    MMDB
    CATH
    2VMY ( Chain: B, A)
    Crystal Structure Of F351gbsshmt In Complex With Gly And Fthf
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilusChain B = 3.0e-844618View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.0e-844618View alignment
    2VMW ( Chain: A)
    Crystal Structure Of F351gbsshmt In Complex With L-Ser
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    2VMX ( Chain: A)
    Crystal Structure Of F351gbsshmt In Complex With L-Allo-Thr
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    2VMV ( Chain: A)
    Crystal Structure Of F351gbsshmt Internal Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    1YJS ( Chain: A)
    K226q Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Glycine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    2W7H ( Chain: A)
    Crystal Structure Of Y51fbsshmt Obtained In The Presence Of Gly And 5-Formyl Tetrahydrofolate
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    2W7G ( Chain: A)
    Crystal Structure Of Y51fbsshmt L-Allo-Threonine Extrnal Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    2W7F ( Chain: A)
    Crystal Structure Of Y51fbsshmt L-Ser External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    2VMZ ( Chain: A)
    Crystal Structure Of F351gbsshmt In Complex With Gly
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    2W7D ( Chain: A)
    Crystal Structure Of Y51fbsshmt Internal Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    2W7E ( Chain: A)
    Crystal Structure Of Y51fbsshmt Obtained In The Presence Of Glycine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus3.0e-844618View alignmentSCOP
    MMDB
    CATH
    1YJZ ( Chain: A)
    K226m Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus5.0e-844617View alignmentSCOP
    MMDB
    CATH
    1YJY ( Chain: A)
    K226m Mutant Of Serine Hydroxymethyltransferase From B. Stearothermophilus, Complex With Serine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus5.0e-844617View alignmentSCOP
    MMDB
    CATH
    2VMQ ( Chain: A)
    Structure Of N341absshmt Crystallized In The Presence Of L- Allo-Thr
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus8.2e-844617View alignmentSCOP
    MMDB
    CATH
    2VMP ( Chain: A)
    Crystal Structure Of N341absshmt L-Ser External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus8.2e-844617View alignmentSCOP
    MMDB
    CATH
    2VMO ( Chain: A)
    Crystal Structure Of N341absshmt Gly External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus8.2e-844617View alignmentSCOP
    MMDB
    CATH
    2VMN ( Chain: A)
    Crystal Structure Of N341absshmt Internal Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus8.2e-844617View alignmentSCOP
    MMDB
    CATH
    2VMS ( Chain: A)
    Crystal Structure Of Y60absshmt Crystallized In The Presence Of Glycine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    2VMT ( Chain: A)
    Crystal Structure Of Y60absshmt L-Ser External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    2VMR ( Chain: A)
    Crystal Structure Of Y60absshmt Internal Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    2W7M ( Chain: A)
    Crystal Structure Of Y61absshmt Obtained In The Presence Of Glycine And 5-Formyl Tetrahydrofolate
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    2W7L ( Chain: A)
    Crystal Structure Of Y61absshmt L-Allo-Threonine External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    2W7K ( Chain: A)
    Crystal Structure Of Y61absshmt L-Serine External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    2VMU ( Chain: A)
    Crystal Structure Of Y60absshmt Crystallized In The Presence Of L-Allo-Thr
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    2W7I ( Chain: A)
    Crystal Structure Of Y61absshmt Internal Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    2W7J ( Chain: A)
    Crystal Structure Of Y61absshmt Glycine External Aldimine
  • PDB_Info
  • PDB_Structure
  • Geobacillus stearothermophilus1.1e-834617View alignmentSCOP
    MMDB
    CATH
    4J5U ( Chain: B, A)
    X-ray Crystal Structure Of A Serine Hydroxymethyltransferase With Covalently Bound Plp From Rickettsia Rickettsii Str. Sheila Smith
  • PDB_Info
  • PDB_Structure
  • Rickettsia rickettsii str. 'Sheila Smith'Chain B = 5.7e-834517View alignmentSCOP
    MMDB
    CATH
    Chain A = 5.7e-834517View alignment
    3GBX ( Chain: B, A)
    Serine Hydroxymethyltransferase From Salmonella Typhimurium
  • PDB_Info
  • PDB_Structure
  • Salmonella enterica subsp. enterica serovar TyphimuriumChain B = 1.9e-824615View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.9e-824615View alignment
    3PGY ( Chain: A, D, C, B)
    Serine Hydroxymethyltransferase From Staphylococcus Aureus, S95p Mutant.
  • PDB_Info
  • PDB_Structure
  • Staphylococcus aureus subsp. aureus COLChain A = 5.9e-814318View alignmentSCOP
    MMDB
    CATH
    Chain D = 5.9e-814318View alignment
    Chain C = 5.9e-814318View alignment
    Chain B = 5.9e-814318View alignment
    3H7F ( Chain: B, A)
    Crystal Structure Of Serine Hydroxymethyltransferase From Mycobacterium Tuberculosis
  • PDB_Info
  • PDB_Structure
  • Mycobacterium tuberculosisChain B = 6.9e-804118View alignmentSCOP
    MMDB
    CATH
    Chain A = 6.9e-804118View alignment
    3ECD ( Chain: A, D, C, B)
    Crystal Structure Of Serine Hydroxymethyltransferase From Burkholderia Pseudomallei
  • PDB_Info
  • PDB_Structure
  • Burkholderia pseudomalleiChain A = 1.8e-794317View alignmentSCOP
    MMDB
    CATH
    Chain D = 1.8e-794317View alignment
    Chain C = 1.8e-794317View alignment
    Chain B = 1.8e-794317View alignment
    3N0L ( Chain: B, A)
    Crystal Structure Of Serine Hydroxymethyltransferase From Campylobacter Jejuni
  • PDB_Info
  • PDB_Structure
  • Campylobacter jejuniChain B = 3.4e-764020View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.4e-764020View alignment
    4BHE ( Chain: A, B, C, D, E, F, H, I, J, K, L, G)
    Methanococcus Jannaschii Serine Hydroxymethyl-transferase In Complex With Plp
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschiiChain A = 1.7e-443317View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.7e-443317View alignment
    Chain C = 1.7e-443317View alignment
    Chain D = 1.7e-443317View alignment
    Chain E = 1.7e-443317View alignment
    Chain F = 1.7e-443317View alignment
    Chain H = 1.7e-443317View alignment
    Chain I = 1.7e-443317View alignment
    Chain J = 1.7e-443317View alignment
    Chain K = 1.7e-443317View alignment
    Chain L = 1.7e-443317View alignment
    Chain G = 1.7e-443317View alignment
    4BHD ( Chain: B, A)
    Methanococcus Jannaschii Serine Hydroxymethyl-transferase, Apo Form
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschiiChain B = 1.7e-443317View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.7e-443317View alignment

    Last updated on 2014-06-05