PDB Homolog: SEH1/YGL100W Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein SEH1/YGL100W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2016-09-15

31 PDB homolog(s) found for yeast gene SEH1/YGL100W

SEH1/YGL100W links
  • Locus Info
  • PDB protein structure(s) homologous to SEH1Homolog Source (per PDB)Protein Alignment: SEH1 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    3F3F ( Chain: F, B, A, E)
    Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain F = 1.1e-1911000View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.1e-1911000View alignment
    Chain A = 1.1e-1911000View alignment
    Chain E = 1.1e-1911000View alignment
    4XMM ( Chain: C, A)
    Structure Of The Yeast Coat Nucleoporin Complex, Space Group C2
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain C = 1.1e-1911000View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.8e-222825View alignment
    3EWE ( Chain: C, A)
    Crystal Structure Of The Nup85SEH1 COMPLEX
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain C = 1.1e-1911000View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.1e-1911000View alignment
    3F3G ( Chain: A, B, F, E)
    Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P212121
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 1.1e-1911000View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.1e-1911000View alignment
    Chain F = 1.1e-1911000View alignment
    Chain E = 1.1e-1911000View alignment
    3F3P ( Chain: A, E, F, I, B, J)
    Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 1.2e-188990View alignmentSCOP
    MMDB
    CATH
    Chain E = 1.2e-188990View alignment
    Chain F = 1.2e-188990View alignment
    Chain I = 1.2e-188990View alignment
    Chain B = 1.2e-188990View alignment
    Chain J = 1.2e-188990View alignment
    5A9Q ( Chain: P, Y, X, O)
    Human Nuclear Pore Complex
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain P = 9.4e-513620View alignmentSCOP
    MMDB
    CATH
    Chain Y = 9.4e-513620View alignment
    Chain X = 3.1e-272917View alignment
    Chain O = 3.1e-272917View alignment
    4YCZ ( Chain: A)
    Y-complex Hub (nup85-nup120-nup145c-sec13 Complex) From M. Thermophila (a.k.a. T. Heterothallica)
  • PDB_Info
  • PDB_Structure
  • Myceliophthora thermophila ATCC 424642.2e-272719View alignmentSCOP
    MMDB
    CATH
    3BG1 ( Chain: E, D, A, H)
    Architecture Of A Coat For The Nuclear Pore Membrane
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain E = 3.1e-272917View alignmentSCOP
    MMDB
    CATH
    Chain D = 3.1e-272917View alignment
    Chain A = 3.1e-272917View alignment
    Chain H = 3.1e-272917View alignment
    3BG0 ( Chain: H, E, A, D)
    Architecture Of A Coat For The Nuclear Pore Membrane
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain H = 3.1e-272917View alignmentSCOP
    MMDB
    CATH
    Chain E = 3.1e-272917View alignment
    Chain A = 3.1e-272917View alignment
    Chain D = 3.1e-272917View alignment
    4L9O ( Chain: B, A)
    Crystal Structure Of The Sec13-sec16 Blade-inserted Complex From Pichia Pastoris
  • PDB_Info
  • PDB_Structure
  • Komagataella pastoris CBS 7435Chain B = 4.8e-243019View alignmentSCOP
    MMDB
    CATH
    Chain A = 4.8e-243019View alignment
    4BZJ ( Chain: B, F)
    The Structure Of The Copii Coat Assembled On Membranes
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain B = 3.8e-222825View alignmentSCOP
    MMDB
    CATH
    Chain F = 3.8e-222825View alignment
    4XMN ( Chain: A)
    Structure Of The Yeast Coat Nucleoporin Complex, Space Group P212121
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c3.8e-222825View alignmentSCOP
    MMDB
    CATH
    2PM6 ( Chain: B, D)
    Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain B = 3.8e-222825View alignmentSCOP
    MMDB
    CATH
    Chain D = 3.8e-222825View alignment
    3IKO ( Chain: A, D, G)
    Crystal Structure Of The Heterotrimeric Sec13-Nup145c-Nup84 Nucleoporin Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 3.8e-222825View alignmentSCOP
    MMDB
    CATH
    Chain D = 3.8e-222825View alignment
    Chain G = 3.8e-222825View alignment
    3MZK ( Chain: A, D)
    Sec13SEC16 COMPLEX, S.CEREVISIAE
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 3.8e-222825View alignmentSCOP
    MMDB
    CATH
    Chain D = 3.8e-222825View alignment
    3MZL ( Chain: A, C, E, G)
    Sec13SEC31 EDGE ELEMENT, LOOP DELETION MUTANT
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 3.8e-222825View alignmentSCOP
    MMDB
    CATH
    Chain C = 3.8e-222825View alignment
    Chain E = 3.8e-222825View alignment
    Chain G = 3.8e-222825View alignment
    4BZK ( Chain: B, F)
    The Structure Of The Copii Coat Assembled On Membranes
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain B = 3.8e-222825View alignmentSCOP
    MMDB
    CATH
    Chain F = 3.8e-222825View alignment
    3JRP ( Chain: A)
    Sec13 With Nup145c (Aa109-179) Insertion Blade
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.8e-222825View alignmentSCOP
    MMDB
    CATH
    2PM9 ( Chain: B)
    Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.8e-222825View alignmentSCOP
    MMDB
    CATH
    2PM7 ( Chain: B, D)
    Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain B = 1.2e-212824View alignmentSCOP
    MMDB
    CATH
    Chain D = 1.2e-212824View alignment
    3JRO ( Chain: A)
    Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae4.6e-212825View alignmentSCOP
    MMDB
    CATH
    2HES ( Chain: X)
    Cytosolic Iron-sulphur Assembly Protein- 1
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae9.9e-112521View alignmentSCOP
    MMDB
    CATH
    1VYH ( Chain: L, O, P, S, T, H, G, D, C, K)
    Paf-Ah Holoenzyme: Lis1ALFA2
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain L = 2.9e-053720View alignmentSCOP
    MMDB
    CATH
    Chain O = 2.9e-053720View alignment
    Chain P = 2.9e-053720View alignment
    Chain S = 2.9e-053720View alignment
    Chain T = 2.9e-053720View alignment
    Chain H = 2.9e-053720View alignment
    Chain G = 2.9e-053720View alignment
    Chain D = 2.9e-053720View alignment
    Chain C = 2.9e-053720View alignment
    Chain K = 2.9e-053720View alignment
    3DM0 ( Chain: A)
    Maltose Binding Protein Fusion With Rack1 From A. Thaliana
  • PDB_Info
  • PDB_Structure
  • Escherichia coli K-120.0037012616View alignmentSCOP
    MMDB
    CATH
    3RFG ( Chain: B, A)
    Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain B = 0.0069982023View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0069982023View alignment
    3RFH ( Chain: D, C, B, A)
    Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain D = 0.0069982023View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0069982023View alignment
    Chain B = 0.0069982023View alignment
    Chain A = 0.0069982023View alignment
    5CVL ( Chain: A)
    Wdr48 (uaf-1), Residues 2-580
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0083952624View alignmentSCOP
    MMDB
    CATH
    5CVN ( Chain: A)
    Wdr48 (2-580):usp46~ubiquitin Ternary Complex
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0083952624View alignmentSCOP
    MMDB
    CATH
    5K1B ( Chain: B)
    Crystal Structure Of The Uaf1/usp12 Complex In F222 Space Group
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0098032624View alignmentSCOP
    MMDB
    CATH
    5K1A ( Chain: H, F, D, B)
    Crystal Structure Of The Uaf1-usp12 Complex In C2 Space Group
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain H = 0.0098032624View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0098032624View alignment
    Chain D = 0.0098032624View alignment
    Chain B = 0.0098032624View alignment
    5CVO ( Chain: A, D)
    Wdr48:usp46~ubiquitin Ternary Complex
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0098032624View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0098032624View alignment

    Last updated on 2016-09-15