PDB Homolog: SEH1/YGL100W Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein SEH1/YGL100W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-06-05

32 PDB homolog(s) found for yeast gene SEH1/YGL100W

SEH1/YGL100W links
  • Locus Info
  • PDB protein structure(s) homologous to SEH1Homolog Source (per PDB)Protein Alignment: SEH1 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    3F3G ( Chain: F, E, B, A)
    Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P212121
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain F = 8.5e-1921000View alignmentSCOP
    MMDB
    CATH
    Chain E = 8.5e-1921000View alignment
    Chain B = 8.5e-1921000View alignment
    Chain A = 8.5e-1921000View alignment
    3EWE ( Chain: A, C)
    Crystal Structure Of The Nup85SEH1 COMPLEX
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 8.5e-1921000View alignmentSCOP
    MMDB
    CATH
    Chain C = 8.5e-1921000View alignment
    3F3F ( Chain: E, B, A, F)
    Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain E = 8.5e-1921000View alignmentSCOP
    MMDB
    CATH
    Chain B = 8.5e-1921000View alignment
    Chain A = 8.5e-1921000View alignment
    Chain F = 8.5e-1921000View alignment
    3F3P ( Chain: I, J, F, E, B, A)
    Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain I = 9.9e-189990View alignmentSCOP
    MMDB
    CATH
    Chain J = 9.9e-189990View alignment
    Chain F = 9.9e-189990View alignment
    Chain E = 9.9e-189990View alignment
    Chain B = 9.9e-189990View alignment
    Chain A = 9.9e-189990View alignment
    3BG0 ( Chain: D, A, E, H)
    Architecture Of A Coat For The Nuclear Pore Membrane
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain D = 2.4e-272917View alignmentSCOP
    MMDB
    CATH
    Chain A = 2.4e-272917View alignment
    Chain E = 2.4e-272917View alignment
    Chain H = 2.4e-272917View alignment
    3BG1 ( Chain: E, H, A, D)
    Architecture Of A Coat For The Nuclear Pore Membrane
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain E = 2.4e-272917View alignmentSCOP
    MMDB
    CATH
    Chain H = 2.4e-272917View alignment
    Chain A = 2.4e-272917View alignment
    Chain D = 2.4e-272917View alignment
    4L9O ( Chain: A, B)
    Crystal Structure Of The Sec13-sec16 Blade-inserted Complex From Pichia Pastoris
  • PDB_Info
  • PDB_Structure
  • Komagataella pastorisChain A = 3.8e-243019View alignmentSCOP
    MMDB
    CATH
    Chain B = 3.8e-243019View alignment
    4BZJ ( Chain: B, F)
    The Structure Of The Copii Coat Assembled On Membranes
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain B = 3.1e-222825View alignmentSCOP
    MMDB
    CATH
    Chain F = 3.1e-222825View alignment
    2PM6 ( Chain: B, D)
    Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain B = 3.1e-222825View alignmentSCOP
    MMDB
    CATH
    Chain D = 3.1e-222825View alignment
    3IKO ( Chain: A, D, G)
    Crystal Structure Of The Heterotrimeric Sec13-Nup145c-Nup84 Nucleoporin Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 3.1e-222825View alignmentSCOP
    MMDB
    CATH
    Chain D = 3.1e-222825View alignment
    Chain G = 3.1e-222825View alignment
    3MZK ( Chain: A, D)
    Sec13SEC16 COMPLEX, S.CEREVISIAE
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 3.1e-222825View alignmentSCOP
    MMDB
    CATH
    Chain D = 3.1e-222825View alignment
    3MZL ( Chain: A, C, E, G)
    Sec13SEC31 EDGE ELEMENT, LOOP DELETION MUTANT
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 3.1e-222825View alignmentSCOP
    MMDB
    CATH
    Chain C = 3.1e-222825View alignment
    Chain E = 3.1e-222825View alignment
    Chain G = 3.1e-222825View alignment
    4BZK ( Chain: B, F)
    The Structure Of The Copii Coat Assembled On Membranes
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain B = 3.1e-222825View alignmentSCOP
    MMDB
    CATH
    Chain F = 3.1e-222825View alignment
    3JRP ( Chain: A)
    Sec13 With Nup145c (Aa109-179) Insertion Blade
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.1e-222825View alignmentSCOP
    MMDB
    CATH
    2PM9 ( Chain: B)
    Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.1e-222825View alignmentSCOP
    MMDB
    CATH
    2PM7 ( Chain: D, B)
    Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain D = 1.0e-212824View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.0e-212824View alignment
    3JRO ( Chain: A)
    Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.6e-212825View alignmentSCOP
    MMDB
    CATH
    2HES ( Chain: X)
    Cytosolic Iron-sulphur Assembly Protein- 1
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae7.9e-112521View alignmentSCOP
    MMDB
    CATH
    1VYH ( Chain: H, K, L, O, P, G, S, C, T, D)
    Paf-Ah Holoenzyme: Lis1ALFA2
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain H = 2.3e-053720View alignmentSCOP
    MMDB
    CATH
    Chain K = 2.3e-053720View alignment
    Chain L = 2.3e-053720View alignment
    Chain O = 2.3e-053720View alignment
    Chain P = 2.3e-053720View alignment
    Chain G = 2.3e-053720View alignment
    Chain S = 2.3e-053720View alignment
    Chain C = 2.3e-053720View alignment
    Chain T = 2.3e-053720View alignment
    Chain D = 2.3e-053720View alignment
    3OW8 ( Chain: D, C, A, B)
    Crystal Structure Of The Wd Repeat-Containing Protein 61
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain D = 0.0001202421View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0001202421View alignment
    Chain A = 0.0001202421View alignment
    Chain B = 0.0001202421View alignment
    3JYV ( Chain: R)
    Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution
  • PDB_Info
  • PDB_Structure
  • Thermomyces lanuginosus0.0054012023View alignmentSCOP
    MMDB
    CATH
    1TRJ ( Chain: A)
    Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0054012023View alignmentSCOP
    MMDB
    CATH
    4CUY ( Chain: g)
    Kluyveromyces Lactis 80s Ribosome In Complex With Crpv-ires
  • PDB_Info
  • PDB_Structure
  • Kluyveromyces lactis0.0054012023View alignmentSCOP
    MMDB
    CATH
    3RFH ( Chain: C, D, B, A)
    Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain C = 0.0055002023View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0055002023View alignment
    Chain B = 0.0055002023View alignment
    Chain A = 0.0055002023View alignment
    3IZB ( Chain: a)
    Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0055002023View alignmentSCOP
    MMDB
    CATH
    3O2Z ( Chain: T)
    Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0055002023View alignmentSCOP
    MMDB
    CATH
    3O30 ( Chain: T)
    Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0055002023View alignmentSCOP
    MMDB
    CATH
    3U5C ( Chain: g)
    The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 40s Subunit, Ribosome A
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c0.0055002023View alignmentSCOP
    MMDB
    CATH
    3U5G ( Chain: g)
    The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 40s Subunit, Ribosome B
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c0.0055002023View alignmentSCOP
    MMDB
    CATH
    4BYL ( Chain: 6)
    Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0055002023View alignmentSCOP
    MMDB
    CATH
    4BYT ( Chain: 6)
    Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0055002023View alignmentSCOP
    MMDB
    CATH
    3RFG ( Chain: A, B)
    Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain A = 0.0055002023View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0055002023View alignment

    Last updated on 2014-06-05