PDB Homolog: RPL30/YGL030W Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein RPL30/YGL030W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-06-05

71 PDB homolog(s) found for yeast gene RPL30/YGL030W

RPL30/YGL030W links
  • Locus Info
  • PDB protein structure(s) homologous to RPL30Homolog Source (per PDB)Protein Alignment: RPL30 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    4B6A ( Chain: c)
    Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex With Arx1 And Rei1
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c3.7e-491000View alignmentSCOP
    MMDB
    CATH
    4CUW ( Chain: c)
    Kluyveromyces Lactis 80s Ribosome In Complex With Crpv-ires
  • PDB_Info
  • PDB_Structure
  • Kluyveromyces lactis3.7e-491000View alignmentSCOP
    MMDB
    CATH
    3J65 ( Chain: b)
    Arx1 Pre-60s Particle. This Entry Contains The R-proteins And Biogenesis Factors.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.7e-491000View alignmentSCOP
    MMDB
    CATH
    1T0K ( Chain: B)
    Joint X-ray And Nmr Refinement Of Yeast L30e-mrna Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.7e-491000View alignmentSCOP
    MMDB
    CATH
    3U5I ( Chain: c)
    The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 60s Subunit, Ribosome B
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c3.7e-491000View alignmentSCOP
    MMDB
    CATH
    3O58 ( Chain: Z)
    Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.7e-491000View alignmentSCOP
    MMDB
    CATH
    3O5H ( Chain: Z)
    Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.7e-491000View alignmentSCOP
    MMDB
    CATH
    3U5E ( Chain: c)
    The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 60s Subunit, Ribosome A
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c3.7e-491000View alignmentSCOP
    MMDB
    CATH
    3IZS ( Chain: f)
    Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.7e-491000View alignmentSCOP
    MMDB
    CATH
    4BYU ( Chain: c)
    Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.2e-481000View alignmentSCOP
    MMDB
    CATH
    1NMU ( Chain: D, B)
    Mbp-L30
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain D = 1.2e-481000View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.2e-481000View alignment
    4BYN ( Chain: c)
    Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.2e-481000View alignmentSCOP
    MMDB
    CATH
    1CK2 ( Chain: A)
    Yeast (Saccharomyces Cerevisiae) Ribosomal Protein L30
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.2e-481000View alignmentSCOP
    MMDB
    CATH
    1CN7 ( Chain: A)
    Yeast Ribosomal Protein L30
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.2e-481000View alignmentSCOP
    MMDB
    CATH
    3JYW ( Chain: 2)
    Structure Of The 60s Proteins For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution
  • PDB_Info
  • PDB_Structure
  • Thermomyces lanuginosus1.4e-451000View alignmentSCOP
    MMDB
    CATH
    3J39 ( Chain: c)
    Structure Of The D. Melanogaster 60s Ribosomal Proteins
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster2.7e-306518View alignmentSCOP
    MMDB
    CATH
    3J3B ( Chain: c)
    Structure Of The Human 60s Ribosomal Proteins
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.9e-296120View alignmentSCOP
    MMDB
    CATH
    3VI6 ( Chain: A)
    Crystal Structure Of Human Ribosomal Protein L30e
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.9e-296120View alignmentSCOP
    MMDB
    CATH
    2ZKR ( Chain: 6)
    Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-em Map
  • PDB_Info
  • PDB_Structure
  • Canis lupus familiaris3.9e-296120View alignmentSCOP
    MMDB
    CATH
    1YSH ( Chain: C)
    Localization And Dynamic Behavior Of Ribosomal Protein L30e
  • PDB_Info
  • PDB_Structure
  • Triticum aestivum1.0e-286416View alignmentSCOP
    MMDB
    CATH
    3J61 ( Chain: c)
    Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Triticum aestivum4.0e-276015View alignmentSCOP
    MMDB
    CATH
    4ADX ( Chain: 6)
    The Cryo-em Structure Of The Archaeal 50s Ribosomal Subunit In Complex With Initiation Factor 6
  • PDB_Info
  • PDB_Structure
  • Methanothermobacter thermautotrophicus str. Delta H9.7e-265622View alignmentSCOP
    MMDB
    CATH
    4A19 ( Chain: G)
    T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 2.
  • PDB_Info
  • PDB_Structure
  • Tetrahymena thermophila9.7e-265622View alignmentSCOP
    MMDB
    CATH
    4A1D ( Chain: G)
    T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 4.
  • PDB_Info
  • PDB_Structure
  • Tetrahymena thermophila9.7e-265622View alignmentSCOP
    MMDB
    CATH
    4A1B ( Chain: G)
    T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 3.
  • PDB_Info
  • PDB_Structure
  • Tetrahymena thermophila9.7e-265622View alignmentSCOP
    MMDB
    CATH
    4A18 ( Chain: G)
    T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 26s Rrna And Proteins Of Molecule 1
  • PDB_Info
  • PDB_Structure
  • Tetrahymena thermophila9.7e-265622View alignmentSCOP
    MMDB
    CATH
    3ZF7 ( Chain: g)
    High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome
  • PDB_Info
  • PDB_Structure
  • Trypanosoma brucei brucei strain 927/4 GUTat10.15.4e-255525View alignmentSCOP
    MMDB
    CATH
    2BO1 ( Chain: A)
    Crystal Structure Of A Hybrid Ribosomal Protein L30e With Surface Residues From T. Celer, And Core Residues From Yeast
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer5.4e-23669View alignmentSCOP
    MMDB
    CATH
    3J21 ( Chain: Z, 4, G)
    Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (50s Ribosomal Proteins)
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus DSM 3638Chain Z = 3.1e-134221View alignmentSCOP
    MMDB
    CATH
    Chain 4 = 0.0004002721View alignment
    Chain G = 0.0004002721View alignment
    3J44 ( Chain: Z, G)
    Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (50s Ribosomal Subunit)
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschiiChain Z = 3.1e-134221View alignmentSCOP
    MMDB
    CATH
    Chain G = 0.0004002721View alignment
    3CPQ ( Chain: A, B)
    Crystal Structure Of L30e A Ribosomal Protein From Methanocaldococcus Jannaschii Dsm2661 (Mj1044)
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschiiChain A = 7.3e-123525View alignmentSCOP
    MMDB
    CATH
    Chain B = 7.3e-123525View alignment
    3N4Z ( Chain: B, A)
    Crystal Structure Of Quintuple Arg-To-Lys Variant Of T. Celer L30e
  • PDB_Info
  • PDB_Structure
  • Thermococcus celerChain B = 7.3e-124023View alignmentSCOP
    MMDB
    CATH
    Chain A = 7.3e-124023View alignment
    1W3E ( Chain: X)
    Ribosomal L30e Of Thermococcus Celer, P59a Mutant
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer4.1e-113825View alignmentSCOP
    MMDB
    CATH
    3RA5 ( Chain: A, B)
    Crystal Structure Of T. Celer L30e E6aR92A VARIANT
  • PDB_Info
  • PDB_Structure
  • Thermococcus celerChain A = 4.1e-113825View alignmentSCOP
    MMDB
    CATH
    Chain B = 4.1e-113825View alignment
    1H7M ( Chain: A)
    Ribosomal Protein L30e From Thermococcus Celer
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer4.1e-113825View alignmentSCOP
    MMDB
    CATH
    1GO0 ( Chain: A)
    Nmr Structure Of Ribosomal Protein L30e From Thermococcus Celer
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer4.1e-113825View alignmentSCOP
    MMDB
    CATH
    1GO1 ( Chain: A)
    Nmr Structure Of Ribosomal Protein L30e From Thermococcus Celer
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer4.1e-113825View alignmentSCOP
    MMDB
    CATH
    3N4Y ( Chain: A)
    Crystal Structure Of Wild-Type T. Celer L30e In Low Ionic Strength Condition Without Precipitant
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer4.1e-113825View alignmentSCOP
    MMDB
    CATH
    1W40 ( Chain: A)
    T. Celer L30e K9a Variant
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer4.1e-113825View alignmentSCOP
    MMDB
    CATH
    1W42 ( Chain: A)
    T. Celer L30e R92a Variant
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer4.1e-113825View alignmentSCOP
    MMDB
    CATH
    1W41 ( Chain: A)
    T.Celer L30e E90a Variant
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer1.0e-103824View alignmentSCOP
    MMDB
    CATH
    3LFO ( Chain: A)
    Crystal Structure Of T. Celer L30e E90aR92A VARIANT
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer1.0e-103824View alignmentSCOP
    MMDB
    CATH
    3RA6 ( Chain: A)
    Crystal Structure Of T. Celer L30e E62aK46A VARIANT
  • PDB_Info
  • PDB_Structure
  • Thermococcus celer1.8e-103725View alignmentSCOP
    MMDB
    CATH
    2HVY ( Chain: D)
    Crystal Structure Of An HACA BOX RNP FROM PYROCOCCUS FURIOSUS
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    3HAX ( Chain: D)
    Crystal Structure Of A Substrate-Bound Gar1-Minus HACA RNP FROM Pyrococcus Furiosus
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    1SDS ( Chain: C, B, A)
    Structure Of Protein L7ae Bound To A K-Turn Derived From An Archaeal Box HACA SRNA
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschiiChain C = 0.0004002916View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0004002916View alignment
    Chain A = 0.0004002916View alignment
    1XBI ( Chain: A)
    High Resolution Structure Of Methanocaldococcus Jannaschii L7ae
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschii0.0004002916View alignmentSCOP
    MMDB
    CATH
    1RA4 ( Chain: A)
    Crystal Structure Of The Methanococcus Jannaschii L7ae Protein
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschii0.0004002916View alignmentSCOP
    MMDB
    CATH
    4BY9 ( Chain: M, J, G, D)
    The Structure Of The Box Cd Enzyme Reveals Regulation Of Rrna Methylation
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosusChain M = 0.0004002721View alignmentSCOP
    MMDB
    CATH
    Chain J = 0.0004002721View alignment
    Chain G = 0.0004002721View alignment
    Chain D = 0.0004002721View alignment
    3J43 ( Chain: 3)
    Structure Of The Methanococcus Jannaschii Ribosome-secyebeta Channel Complex (30s Ribosomal Subunit)
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschii0.0004002721View alignmentSCOP
    MMDB
    CATH
    3HAY ( Chain: D)
    Crystal Structure Of A Substrate-Bound Full HACA RNP FROM Pyrococcus Furiosus
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    3HJW ( Chain: C)
    Structure Of A Functional Ribonucleoprotein Pseudouridine Synthase Bound To A Substrate Rna
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    3NMU ( Chain: C, G)
    Crystal Structure Of Substrate-Bound Halfmer Box CD RNP
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosusChain C = 0.0004002721View alignmentSCOP
    MMDB
    CATH
    Chain G = 0.0004002721View alignment
    3NVI ( Chain: B, D)
    Structure Of N-terminal Truncated Nop56/58 Bound With L7ae And Box C/d Rna
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus DSM 3638Chain B = 0.0004002721View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0004002721View alignment
    3NVK ( Chain: E, H)
    Structural Basis For Substrate Placement By An Archaeal Box CD Ribonucleoprotein Particle
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus DSM 3638Chain E = 0.0004002721View alignmentSCOP
    MMDB
    CATH
    Chain H = 0.0004002721View alignment
    2CZW ( Chain: A)
    Crystal Structure Analysis Of Protein Component Ph1496p Of P.Horikoshii Ribonuclease P
  • PDB_Info
  • PDB_Structure
  • Pyrococcus horikoshii0.0004002721View alignmentSCOP
    MMDB
    CATH
    1PXW ( Chain: A, B)
    Crystal Structure Of L7ae Srnp Core Protein From Pyrococcus Abyssii
  • PDB_Info
  • PDB_Structure
  • Pyrococcus abyssiChain A = 0.0004002721View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0004002721View alignment
    3LWO ( Chain: C)
    Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING 5BRU
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    3LWP ( Chain: C)
    Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING 5BRDU
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    3LWQ ( Chain: C)
    Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING 3MU
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    3LWR ( Chain: C)
    Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING 4SU
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    3LWV ( Chain: C)
    Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING 2'- Deoxyuridine
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus0.0004002721View alignmentSCOP
    MMDB
    CATH
    3J20 ( Chain: 3)
    Promiscuous Behavior Of Proteins In Archaeal Ribosomes Revealed By Cryo-em: Implications For Evolution Of Eukaryotic Ribosomes (30s Ribosomal Subunit)
  • PDB_Info
  • PDB_Structure
  • Pyrococcus furiosus DSM 36380.0004002721View alignmentSCOP
    MMDB
    CATH
    3PLA ( Chain: L, C, D)
    Crystal Structure Of A Catalytically Active Substrate-Bound Box CD Rnp From Sulfolobus Solfataricus
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus 98/2Chain L = 0.0011002922View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0011002922View alignment
    Chain D = 0.0011002922View alignment
    3ID5 ( Chain: C, G)
    Crystal Structure Of Sulfolobus Solfataricus C/d Rnp Assembled With Nop5, Fibrillarin, L7ae And A Split Half C/d Rna
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricusChain C = 0.0011002922View alignmentSCOP
    MMDB
    CATH
    Chain G = 0.0011002922View alignment
    3PAF ( Chain: A, B)
    M. Jannaschii L7ae Mutant
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschiiChain A = 0.0017002817View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0017002817View alignment
    2FC3 ( Chain: A)
    Crystal Structure Of The Extremely Thermostable Aeropyrum Pernix L7ae Multifunctional Protein
  • PDB_Info
  • PDB_Structure
  • Aeropyrum pernix0.0028002524View alignmentSCOP
    MMDB
    CATH
    3ON1 ( Chain: A)
    The Structure Of A Protein With Unknown Function From Bacillus Halodurans C
  • PDB_Info
  • PDB_Structure
  • Bacillus halodurans C-1250.0035992820View alignmentSCOP
    MMDB
    CATH
    1RLG ( Chain: A, B)
    Molecular Basis Of Box CD RNA-Protein Interaction: Co- Crystal Structure Of The Archaeal Srnp Intiation Complex
  • PDB_Info
  • PDB_Structure
  • Archaeoglobus fulgidusChain A = 0.0045983016View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0045983016View alignment
    4C4W ( Chain: C, G)
    Structure Of A Rare, Non-standard Sequence K-turn Bound By L7ae Protein
  • PDB_Info
  • PDB_Structure
  • Archaeoglobus fulgidus DSM 4304Chain C = 0.0053003016View alignmentSCOP
    MMDB
    CATH
    Chain G = 0.0053003016View alignment
    4BW0 ( Chain: B)
    The Molecular Recognition Of Kink Turn Structure By The L7ae Class Of Proteins
  • PDB_Info
  • PDB_Structure
  • Archaeoglobus fulgidus0.0053003016View alignmentSCOP
    MMDB
    CATH

    Last updated on 2014-06-05