PDB Homolog: NPL3/YDR432W Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein NPL3/YDR432W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2016-09-15

160 PDB homolog(s) found for yeast gene NPL3/YDR432W

NPL3/YDR432W links
  • Locus Info
  • PDB protein structure(s) homologous to NPL3Homolog Source (per PDB)Protein Alignment: NPL3 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    2JVR ( Chain: A)
    Segmental Isotope Labeling Of Npl3p
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae4.4e-441000View alignmentSCOP
    MMDB
    CATH
    2JVO ( Chain: A)
    Segmental Isotope Labeling Of Npl3
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae5.1e-431000View alignmentSCOP
    MMDB
    CATH
    2OSR ( Chain: A)
    Nmr Structure Of Rrm-2 Of Yeast Npl3 Protein
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.1e-421000View alignmentSCOP
    MMDB
    CATH
    2OSQ ( Chain: A)
    Nmr Structure Of Rrm-1 Of Yeast Npl3 Protein
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.1e-341000View alignmentSCOP
    MMDB
    CATH
    5AOR ( Chain: B, A)
    Structure Of Mle Rna Adp Alf4 Complex
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogasterChain B = 1.3e-124310View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.3e-124310View alignment
    2DGU ( Chain: A)
    Solution Structure Of The Rna Binding Domain In Heterogeneous Nuclear Ribonucleoprotein Q
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.0e-093824View alignmentSCOP
    MMDB
    CATH
    2DK2 ( Chain: A)
    Solution Structure Of Rrm Domain In Heterogeneous Nuclear Ribonucleoprotein R (Hnrnp R)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens6.5e-094020View alignmentSCOP
    MMDB
    CATH
    2JRS ( Chain: A)
    Solution Nmr Structure Of Caper Rrm2 Domain. Northeast Structural Genomics Target Hr4730a
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.2e-062925View alignmentSCOP
    MMDB
    CATH
    4C0O ( Chain: C, D)
    Transportin 3 In Complex With Phosphorylated Asf/sf2
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 5.4e-063316View alignmentSCOP
    MMDB
    CATH
    Chain D = 5.4e-063316View alignment
    1X4C ( Chain: A)
    Solution Structure Of Rrm Domain In Splicing Factor 2
  • PDB_Info
  • PDB_Structure
  • Mus musculus5.4e-063417View alignmentSCOP
    MMDB
    CATH
    3BEG ( Chain: B)
    Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate Asf/sf2
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.1e-063316View alignmentSCOP
    MMDB
    CATH
    2ERR ( Chain: A)
    Nmr Structure Of The Rna Binding Domain Of Human Fox-1 In Complex With Ugcaugu
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.1e-063217View alignmentSCOP
    MMDB
    CATH
    2M8D ( Chain: B)
    Structure Of Srsf1 Rrm2 In Complex With The Rna 5'-ugaaggac-3'
  • PDB_Info
  • PDB_Structure
  • Homo sapiens9.1e-063820View alignmentSCOP
    MMDB
    CATH
    2M7S ( Chain: A)
    Nmr Structure Of Rna Recognition Motif 2 (rrm2) Of Homo Sapiens Splicing Factor, Arginine/serine-rich 1
  • PDB_Info
  • PDB_Structure
  • Homo sapiens9.1e-063820View alignmentSCOP
    MMDB
    CATH
    2O3D ( Chain: A)
    Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens9.1e-063820View alignmentSCOP
    MMDB
    CATH
    3LQV ( Chain: A, B)
    Branch Recognition By Sf3b14
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 1.1e-053029View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.1e-053029View alignment
    5K7W ( Chain: B)
    Crystal Structure Of The Catalytic Domain Of Mettl3/mettl14 Complex With Sah
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.4e-05498View alignmentSCOP
    MMDB
    CATH
    5K7M ( Chain: B)
    Crystal Structure Of The Catalytic Domains Of Mettl3/mettl14 Complex
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.4e-05498View alignmentSCOP
    MMDB
    CATH
    5K7U ( Chain: B)
    Crystal Structure Of The Catalytic Domains Of Mettl3/mettl14 Complex With Sam
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.4e-05498View alignmentSCOP
    MMDB
    CATH
    2N82 ( Chain: B)
    Solution Structure Of The Complex Of Microrna 20b Pre-element With Rbfox Rrm
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.5e-053219View alignmentSCOP
    MMDB
    CATH
    1WHW ( Chain: A)
    Solution Structure Of The N-Terminal Rna Binding Domain From Hypothetical Protein Bab23448
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.4e-053613View alignmentSCOP
    MMDB
    CATH
    2XNR ( Chain: A)
    Structural Insights Into Cis Element Recognition Of Non- Polyadenylated Rnas By The Nab3-Rrm
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.1e-053623View alignmentSCOP
    MMDB
    CATH
    2XNQ ( Chain: A)
    Structural Insights Into Cis Element Recognition Of Non- Polyadenylated Rnas By The Nab3-Rrm
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae3.1e-053623View alignmentSCOP
    MMDB
    CATH
    2F9D ( Chain: B, A)
    2.5 Angstrom Resolution Structure Of The Spliceosomal Protein P14 Bound To Region Of Sf3b155
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 3.9e-053027View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.9e-053027View alignment
    2D9P ( Chain: A)
    Solution Structure Of Rna Binding Domain 4 In Polyadenylation Binding Protein 3
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.9e-053021View alignmentSCOP
    MMDB
    CATH
    2FHO ( Chain: B)
    Nmr Solution Structure Of The Human Spliceosomal Protein Complex P14-Sf3b155
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.9e-053027View alignmentSCOP
    MMDB
    CATH
    2CQ3 ( Chain: A)
    Solution Structure Of Rna Binding Domain In Rna Binding Motif Protein 9
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.9e-053222View alignmentSCOP
    MMDB
    CATH
    2FY1 ( Chain: A)
    A Dual Mode Of Rna Recognition By The Rbmy Protein
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.9e-053022View alignmentSCOP
    MMDB
    CATH
    4ZKA ( Chain: E, A, C, D, B, F)
    High Resolution Crystal Structure Of Fox1 Rrm
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain E = 5.2e-053221View alignmentSCOP
    MMDB
    CATH
    Chain A = 5.2e-053221View alignment
    Chain C = 5.2e-053221View alignment
    Chain D = 5.2e-053221View alignment
    Chain B = 5.2e-053221View alignment
    Chain F = 5.2e-053221View alignment
    2KVI ( Chain: A)
    Structure Of Nab3 Rrm
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae5.2e-053824View alignmentSCOP
    MMDB
    CATH
    2L41 ( Chain: A)
    Nab3 Rrm - Ucuu Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae5.2e-053824View alignmentSCOP
    MMDB
    CATH
    2I2Y ( Chain: A)
    Solution Structure Of The Rrm Of Srp20 Bound To The Rna Cauc
  • PDB_Info
  • PDB_Structure
  • Streptococcus sp. 'group G'5.8e-053219View alignmentSCOP
    MMDB
    CATH
    1U6F ( Chain: A)
    Nmr Solution Structure Of Tcubp1, A Single Rbd-Unit From Trypanosoma Cruzi
  • PDB_Info
  • PDB_Structure
  • Trypanosoma cruzi6.6e-053121View alignmentSCOP
    MMDB
    CATH
    1DX0 ( Chain: A)
    Bovine Prion Protein Residues 23-230
  • PDB_Info
  • PDB_Structure
  • Bos taurus7.0e-05387View alignmentSCOP
    MMDB
    CATH
    1DX1 ( Chain: A)
    Bovine Prion Protein Residues 23-230
  • PDB_Info
  • PDB_Structure
  • Bos taurus7.0e-05387View alignmentSCOP
    MMDB
    CATH
    3EIV ( Chain: D, C, A, B)
    Crystal Structure Of Single-Stranded Dna-Binding Protein From Streptomyces Coelicolor
  • PDB_Info
  • PDB_Structure
  • Streptomyces coelicolorChain D = 8.1e-05435View alignmentSCOP
    MMDB
    CATH
    Chain C = 8.1e-05435View alignment
    Chain A = 8.1e-05435View alignment
    Chain B = 8.1e-05435View alignment
    2SXL ( Chain: A)
    Sex-Lethal Rbd1, Nmr, Minimized Average Structure
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster8.4e-053123View alignmentSCOP
    MMDB
    CATH
    2F9J ( Chain: A, B)
    3.0 Angstrom Resolution Structure Of A Y22m Mutant Of The Spliceosomal Protein P14 Bound To A Region Of Sf3b155
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 8.4e-053025View alignmentSCOP
    MMDB
    CATH
    Chain B = 8.4e-053025View alignment
    1WG4 ( Chain: A)
    Solution Structure Of Rrm Domain In Protein Bab31986
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0001103521View alignmentSCOP
    MMDB
    CATH
    3BOI ( Chain: B, A)
    Snow Flea Antifreeze Protein Racemate
  • PDB_Info
  • PDB_Structure
  • Hypogastrura harveyiChain B = 0.000139416View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.000139416View alignment
    2PNE ( Chain: A)
    Crystal Structure Of The Snow Flea Antifreeze Protein
  • PDB_Info
  • PDB_Structure
  • Hypogastrura harveyi0.000139416View alignmentSCOP
    MMDB
    CATH
    1B7F ( Chain: B, A)
    Sxl-Lethal ProteinRNA COMPLEX
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogasterChain B = 0.0001492520View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0001492520View alignment
    3BOG ( Chain: B, A)
    Snow Flea Antifreeze Protein Quasi-Racemate
  • PDB_Info
  • PDB_Structure
  • Hypogastrura harveyiChain B = 0.000179416View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.000179416View alignment
    2CPD ( Chain: A)
    Solution Structure Of The Rna Recognition Motif Of Human Apobec-1 Complementation Factor, Acf
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0002303022View alignmentSCOP
    MMDB
    CATH
    4QQB ( Chain: A, B)
    Structural Basis For The Assembly Of The Sxl-unr Translation Regulatory Complex
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogasterChain A = 0.0002302520View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0002302520View alignment
    2KXN ( Chain: B)
    Nmr Structure Of Human Tra2beta1 Rrm In Complex With Aagaac Rna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0002302913View alignmentSCOP
    MMDB
    CATH
    3HQV ( Chain: B)
    Low Resolution, Molecular Envelope Structure Of Type I Collagen In Situ Determined By Fiber Diffraction. Single Type I Collagen Molecule, Rigid Body Refinement
  • PDB_Info
  • PDB_Structure
  • Rattus norvegicus0.000239384View alignmentSCOP
    MMDB
    CATH
    3HR2 ( Chain: B)
    Low Resolution, Molecular Envelope Structure Of Type I Collagen In Situ Determined By Fiber Diffraction. Single Type I Collagen Molecule, Post Rigid Body Refinement, 'relaxed'
  • PDB_Info
  • PDB_Structure
  • Rattus norvegicus0.000239384View alignmentSCOP
    MMDB
    CATH
    2I38 ( Chain: A)
    Solution Structure Of The Rrm Of Srp20
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0002793120View alignmentSCOP
    MMDB
    CATH
    1FNX ( Chain: H)
    Solution Structure Of The Huc Rbd1-Rbd2 Complexed With The Au-Rich Element
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0002792422View alignmentSCOP
    MMDB
    CATH
    2DNZ ( Chain: A)
    Solution Structure Of The Second Rna Binding Domain Of Rna Binding Motif Protein 23
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0002992725View alignmentSCOP
    MMDB
    CATH
    2CQ0 ( Chain: A)
    Solution Structure Of Rna Binding Domain In Eukaryotic Translation Initiation Factor 3 Subunit 4
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0003803217View alignmentSCOP
    MMDB
    CATH
    2KKG ( Chain: A)
    Nmr Structure Of The Octarepeat Region Of Prion Protein Bound To Pentosan Polysulfate
  • PDB_Info
  • PDB_Structure
  • Mesocricetus auratus0.000490444View alignmentSCOP
    MMDB
    CATH
    2RT3 ( Chain: A)
    Solution Structure Of The Second Rrm Domain Of Nrd1
  • PDB_Info
  • PDB_Structure
  • Schizosaccharomyces pombe 972h-0.0006293421View alignmentSCOP
    MMDB
    CATH
    2DNQ ( Chain: A)
    Solution Structure Of Rna Binding Domain 1 In Rna-Binding Protein 30
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0007992717View alignmentSCOP
    MMDB
    CATH
    3MDF ( Chain: A, B)
    Crystal Structure Of The Rrm Domain Of Cyclophilin 33
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0007993321View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0007993321View alignment
    4FXV ( Chain: C, B, A, D)
    Crystal Structure Of An Elav-Like Protein 1 (Elavl1) From Homo Sapiens At 1.90 A Resolution
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0007992423View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0007992423View alignment
    Chain A = 0.0007992423View alignment
    Chain D = 0.0007992423View alignment
    3SXL ( Chain: B, C, A)
    Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila Melanogaster
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogasterChain B = 0.0009302519View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0009302519View alignment
    Chain A = 0.0009302519View alignment
    2QFJ ( Chain: B, A)
    Crystal Structure Of First Two Rrm Domains Of Fir Bound To Ssdna From A Portion Of Fuse
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 0.0009992321View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0009992321View alignment
    3SDE ( Chain: A, B)
    Crystal Structure Of A Paraspeckle-Protein Heterodimer, Pspc1NONO
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0009992917View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0009992917View alignment
    2MB0 ( Chain: B)
    Solution Structure Of Hnrnp G Rrm In Complex With The Rna 5'-aucaaa-3'
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0013002920View alignmentSCOP
    MMDB
    CATH
    2MKS ( Chain: A)
    Nmr Structure Of The Rrm Domain Of Rbmx From Homo Sapiens
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0013002920View alignmentSCOP
    MMDB
    CATH
    2KYX ( Chain: A)
    Solution Structure Of The Rrm Domain Of Cyp33
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0017003319View alignmentSCOP
    MMDB
    CATH
    1X5S ( Chain: A)
    Solution Structure Of Rrm Domain In A18 Hnrnp
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0017003018View alignmentSCOP
    MMDB
    CATH
    2N3L ( Chain: A)
    Solution Structure Of Rna Recognition Motif-1 Of Plasmodium Falciparum Serine/arginine-rich Protein 1.
  • PDB_Info
  • PDB_Structure
  • Plasmodium falciparum 3D70.0017003418View alignmentSCOP
    MMDB
    CATH
    1WF2 ( Chain: A)
    Solution Structure Of Rrm Domain In Hnrpc Protein
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0022002925View alignmentSCOP
    MMDB
    CATH
    1X4G ( Chain: A)
    Solution Structure Of Rrm Domain In Nucleolysin Tiar
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0022003223View alignmentSCOP
    MMDB
    CATH
    2MZ1 ( Chain: A)
    Solution Structure Of Hnrnp C Rrm In Complex With 5'-uuuuc-3' Rna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0022002925View alignmentSCOP
    MMDB
    CATH
    2MXY ( Chain: A)
    Solution Structure Of Hnrnp C Rrm In Complex With 5'-auuuuuc-3' Rna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0022002925View alignmentSCOP
    MMDB
    CATH
    1FXL ( Chain: A)
    Crystal Structure Of Hud And Au-Rich Element Of The C-Fos Rna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0024002423View alignmentSCOP
    MMDB
    CATH
    1G2E ( Chain: A)
    Crystal Structure Of Hud And Au-Rich Element Of The Tumor Necrosis Factor Alpha Rna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0024002423View alignmentSCOP
    MMDB
    CATH
    3G9C ( Chain: C, D, A, B)
    Crystal Structure Of The Product Bacillus Anthracis Glms Ribozyme
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0028003123View alignment
    Chain A = 0.0028003123View alignment
    Chain B = 0.0028003123View alignment
    3IRW ( Chain: P)
    Structure Of A C-Di-Gmp Riboswitch From V. Cholerae
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3MUM ( Chain: P)
    Crystal Structure Of The G20a Mutant C-Di-Gmp Riboswith Bound To C-Di- Gmp
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3MUR ( Chain: P)
    Crystal Structure Of The C92u Mutant C-Di-Gmp Riboswith Bound To C-Di- Gmp
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3MUT ( Chain: P)
    Crystal Structure Of The G20aC92U MUTANT C-Di-Gmp Riboswith Bound To C-Di-Gmp
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3MUV ( Chain: P)
    Crystal Structure Of The G20aC92U MUTANT C-Di-Gmp Riboswith Bound To C-Di-Amp
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3MXH ( Chain: P)
    Native Structure Of A C-Di-Gmp Riboswitch From V. Cholerae
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3P49 ( Chain: B)
    Crystal Structure Of A Glycine Riboswitch From Fusobacterium Nucleatum
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3R1H ( Chain: A, D)
    Crystal Structure Of The Class I Ligase Ribozyme-Substrate Preligation Complex, C47u Mutant, Ca2+ Bound
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0028003123View alignment
    3R1L ( Chain: A, D)
    Crystal Structure Of The Class I Ligase Ribozyme-Substrate Preligation Complex, C47u Mutant, Mg2+ Bound
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0028003123View alignment
    3UCU ( Chain: P)
    The C-Di-Gmp-I Riboswitch Bound To Pgpg
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3UCZ ( Chain: P)
    The C-Di-Gmp-I Riboswitch Bound To Gpg
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3UD3 ( Chain: P)
    The C92u Mutant C-Di-Gmp-I Riboswitch Bound To Pgpa
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3UD4 ( Chain: P)
    The C92u Mutant C-Di-Gmp-I Riboswitch Bound To Gpa
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1M5K ( Chain: C, F)
    Crystal Structure Of A Hairpin Ribozyme In The Catalytically-Active Conformation
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0028003123View alignment
    1M5O ( Chain: C, F)
    Transition State Stabilization By A Catalytic Rna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0028003123View alignment
    1M5P ( Chain: C, F)
    Transition State Stabilization By A Catalytic Rna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0028003123View alignment
    1M5V ( Chain: C, F)
    Transition State Stabilization By A Catalytic Rna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0028003123View alignment
    1SJ3 ( Chain: P)
    Hepatitis Delta Virus Gemonic Ribozyme Precursor, With Mg2+ Bound
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1SJ4 ( Chain: P)
    Crystal Structure Of A C75u Mutant Hepatitis Delta Virus Ribozyme Precursor, In Cu2+ Solution
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1SJF ( Chain: A)
    Crystal Structure Of The Hepatitis Delta Virus Gemonic Ribozyme Precursor, With C75u Mutaion, In Cobalt Hexammine Solution
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1VBX ( Chain: A)
    Crystal Structure Of The Hepatitis Delta Virus Gemonic Ribozyme Precursor, With C75u Mutaion, In Edta Solution
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1VBY ( Chain: A)
    Crystal Structure Of The Hepatitis Delta Virus Gemonic Ribozyme Precursor, With C75u Mutaion, And Mn2+ Bound
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1VBZ ( Chain: A)
    Crystal Structure Of The Hepatitis Delta Virus Gemonic Ribozyme Precursor, With C75u Mutaion, In Ba2+ Solution
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1VC0 ( Chain: A)
    Crystal Structure Of The Hepatitis Delta Virus Gemonic Ribozyme Precursor, With C75u Mutaion, In Imidazole And Sr2+ Solution
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1VC5 ( Chain: A)
    Crystal Structure Of The Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, In Edta Solution
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1VC6 ( Chain: A)
    Crystal Structure Of The Hepatitis Delta Virus Gemonic Ribozyme Product With C75u Mutaion, Cleaved In Imidazole And Mg2+ Solutions
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    2OIH ( Chain: A)
    Hepatitis Delta Virus Gemonic Ribozyme Precursor With C75u Mutation And Bound To Monovalent Cation Tl+
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    2OJ3 ( Chain: A)
    Hepatitis Delta Virus Ribozyme Precursor Structure, With C75u Mutation, Bound To Tl+ And Cobalt Hexammine (Co(Nh3) 63+)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    4PRF ( Chain: A)
    A Second Look At The Hdv Ribozyme Structure And Dynamics.
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1AUD ( Chain: A)
    U1a-Utrrna, Nmr, 31 Structures
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1DZ5 ( Chain: A, B)
    The Nmr Structure Of The 38kda U1a Protein-pie Rna Complex Reveals The Basis Of Cooperativity In Regulation Of Polyadenylation By Human U1a Protein
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    1URN ( Chain: A, B, C)
    U1a MutantRNA COMPLEX + GLYCEROL
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    Chain C = 0.0028003123View alignment
    1NU4 ( Chain: A, B)
    U1a Rna Binding Domain At 1.8 Angstrom Resolution Reveals A Pre- Organized C-terminal Helix
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    3HHN ( Chain: B, D)
    Crystal Structure Of Class I Ligase Ribozyme Self-Ligation Product, In Complex With U1a Rbd
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0028003123View alignment
    5DDO ( Chain: G, C)
    Structural And Dynamic Basis For Low Affinity-high Selectivity Binding Of L-glutamine By The Gln-riboswitch
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain G = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0028003123View alignment
    5DDP ( Chain: C, D)
    L-glutamine Riboswitch Bound With L-glutamine
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0028003123View alignment
    5DDQ ( Chain: C, D)
    L-glutamine Riboswitch Bound With L-glutamine Soaked With Mn2+
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0028003123View alignment
    5DDR ( Chain: C, D)
    L-glutamine Riboswitch Bound With L-glutamine Soaked With Cs+
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0028003123View alignment
    4YB1 ( Chain: P)
    20a Mutant C-di-gmp Vc2 Riboswitch Bound With 3',3'-cgamp
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1D8Z ( Chain: A)
    Solution Structure Of The First Rna-Binding Domain (Rbd1) Of Hu Antigen C (Huc)
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0028002523View alignmentSCOP
    MMDB
    CATH
    2CQB ( Chain: A)
    Solution Structure Of The Rna Recognition Motif In Peptidyl- Prolyl Cis-Trans Isomerase E
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003420View alignmentSCOP
    MMDB
    CATH
    2RRA ( Chain: A)
    Solution Structure Of Rna Binding Domain In Human Tra2 Beta Protein In Complex With Rna (Gaagaa)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003215View alignmentSCOP
    MMDB
    CATH
    2RRB ( Chain: A)
    Refinement Of Rna Binding Domain In Human Tra2 Beta Protein
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003215View alignmentSCOP
    MMDB
    CATH
    1X4A ( Chain: A)
    Solution Structure Of Rrm Domain In Splicing Factor Sf2
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028002627View alignmentSCOP
    MMDB
    CATH
    5FJ4 ( Chain: A, B, E, F)
    Structure Of The Standard Kink Turn Hmkt-7 As Stem Loop Bound With U1a And L7ae Proteins
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    Chain E = 0.0028003123View alignment
    Chain F = 0.0028003123View alignment
    3L3C ( Chain: A, B, C, D)
    Crystal Structure Of The Bacillus Anthracis Glms Ribozyme Bound To Glc6p
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    Chain C = 0.0028003123View alignment
    Chain D = 0.0028003123View alignment
    3K0J ( Chain: A, B, C, D)
    Crystal Structure Of The E. Coli Thim Riboswitch In Complex With Thiamine Pyrophosphate And The U1a Crystallization Module
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    Chain C = 0.0028003123View alignment
    Chain D = 0.0028003123View alignment
    3IWN ( Chain: C, D)
    Co-Crystal Structure Of A Bacterial C-Di-Gmp Riboswitch
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0028003123View alignment
    3BO2 ( Chain: A)
    A Relaxed Active Site Following Exon Ligation By A Group I Intron
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3BO3 ( Chain: A)
    A Relaxed Active Site Following Exon Ligation By A Group I Intron
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3BO4 ( Chain: A)
    A Relaxed Active Site Following Exon Ligation By A Group I Intron
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3IIN ( Chain: A)
    Plasticity Of The Kink Turn Structural Motif
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    2NZ4 ( Chain: A, B, C, D)
    Structural Investigation Of The Glms Ribozyme Bound To Its Catalytic Cofactor
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    Chain C = 0.0028003123View alignment
    Chain D = 0.0028003123View alignment
    1U6B ( Chain: A)
    Crystal Structure Of A Self-Splicing Group I Intron With Both Exons
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    1ZZN ( Chain: A)
    Crystal Structure Of A Group I IntronTWO EXON COMPLEX THAT Includes All Catalytic Metal Ion Ligands.
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0028003123View alignmentSCOP
    MMDB
    CATH
    3G8S ( Chain: A, B, C, D)
    Crystal Structure Of The Pre-Cleaved Bacillus Anthracis Glms Ribozyme
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    Chain C = 0.0028003123View alignment
    Chain D = 0.0028003123View alignment
    3G8T ( Chain: A, B, C, D)
    Crystal Structure Of The G33a Mutant Bacillus Anthracis Glms Ribozyme Bound To Glcn6p
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    Chain C = 0.0028003123View alignment
    Chain D = 0.0028003123View alignment
    3G96 ( Chain: A, B, C, D)
    Crystal Structure Of The Bacillus Anthracis Glms Ribozyme Bound To Man6p
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0028003123View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0028003123View alignment
    Chain C = 0.0028003123View alignment
    Chain D = 0.0028003123View alignment
    1QLZ ( Chain: A)
    Human Prion Protein
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.003599454View alignmentSCOP
    MMDB
    CATH
    1QLX ( Chain: A)
    Human Prion Protein
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.003599454View alignmentSCOP
    MMDB
    CATH
    2MYF ( Chain: A)
    Solution Structure Of Rna Recognition Motif Of A Cyclophilin33-like Protein From Plasmodium Falciparum
  • PDB_Info
  • PDB_Structure
  • Plasmodium falciparum 3D70.0035993218View alignmentSCOP
    MMDB
    CATH
    2HVZ ( Chain: A)
    Solution Structure Of The Rrm Domain Of Sr Rich Factor 9g8
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0035993414View alignmentSCOP
    MMDB
    CATH
    1SXL ( Chain: A)
    Resonance Assignments And Solution Structure Of The Second Rna-Binding Domain Of Sex-Lethal Determined By Multidimensional Heteronuclear Magnetic Resonance Spectroscopy
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster0.0035993118View alignmentSCOP
    MMDB
    CATH
    4WKR ( Chain: A, B)
    Larp7 Wrapping Up The 3' Hairpin Of 7sk Non-coding Rna (302-332)
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0044983412View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0044983412View alignment
    4Y00 ( Chain: D, C, A, B)
    Crystal Structure Of Human Tdp-43 Rrm1 Domain With D169g Mutation In Complex With An Unmodified Single-stranded Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain D = 0.0045983210View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0045983210View alignment
    Chain A = 0.0045983210View alignment
    Chain B = 0.0045983210View alignment
    2DGT ( Chain: A)
    Solution Structure Of The Second Rna Binding Domain In Rna- Binding Protein 30
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0045983115View alignmentSCOP
    MMDB
    CATH
    1OIA ( Chain: B, A)
    U1a Rnp Domain 1-95
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 0.0045983121View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0045983121View alignment
    4Y0F ( Chain: B, A)
    Crystal Structure Of Human Tdp-43 Rrm1 Domain In Complex With An Unmodified Single-stranded Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 0.0045983210View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0045983210View alignment
    3LPY ( Chain: B, A)
    Crystal Structure Of The Rrm Domain Of Cyp33
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 0.0045983519View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0045983519View alignment
    1FHT ( Chain: A)
    Rna-Binding Domain Of The U1a Spliceosomal Protein U1a117, Nmr, 43 Structures
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0045983121View alignmentSCOP
    MMDB
    CATH
    4C4W ( Chain: A, B, E, F)
    Structure Of A Rare, Non-standard Sequence K-turn Bound By L7ae Protein
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0045983121View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0045983121View alignment
    Chain E = 0.0045983121View alignment
    Chain F = 0.0045983121View alignment
    4WII ( Chain: A, B)
    Human Splicing Factor, Construct 3
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0048002817View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0048002817View alignment
    4KML ( Chain: A)
    Probing The N-terminal Beta-sheet Conversion In The Crystal Structure Of The Full-length Human Prion Protein Bound To A Nanobody
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.005200454View alignmentSCOP
    MMDB
    CATH
    4F25 ( Chain: A)
    Crystal Structure Of The Second Rrm Domain Of Human Pabpc1 At Ph 6.0
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0057992823View alignmentSCOP
    MMDB
    CATH
    4F26 ( Chain: A)
    Crystal Structure Of The Second Rrm Domain Of Human Pabpc1 A Ph 9.0
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0057992823View alignmentSCOP
    MMDB
    CATH
    2DO4 ( Chain: A)
    Solution Structure Of The Rna Binding Domain Of Squamous Cell Carcinoma Antigen Recognized By T Cells 3
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0057992523View alignmentSCOP
    MMDB
    CATH
    2DGS ( Chain: A)
    Solution Structure Of The Second Rna Binding Domain In Daz- Associated Protein 1
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0057993219View alignmentSCOP
    MMDB
    CATH
    4WIJ ( Chain: A, B)
    Human Splicing Factor, Construct 1
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0074022817View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0074022817View alignment
    2X1A ( Chain: A)
    Structure Of Rna15 Rrm With Rna Bound (G)
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0074982528View alignmentSCOP
    MMDB
    CATH
    2X1B ( Chain: A)
    Structure Of Rna15 Rrm
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0074982528View alignmentSCOP
    MMDB
    CATH
    2X1F ( Chain: A)
    Structure Of Rna15 Rrm With Bound Rna (Gu)
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0074982528View alignmentSCOP
    MMDB
    CATH
    2KM8 ( Chain: B)
    Interdomain Rrm Packing Contributes To Rna Recognition In The Rna15, Hrp1, Anchor Rna 3' Processing Ternary Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0074982528View alignmentSCOP
    MMDB
    CATH
    2CQC ( Chain: A)
    Solution Structure Of The Rna Recognition Motif In ArginineSERINE-Rich Splicing Factor 10
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0074983215View alignmentSCOP
    MMDB
    CATH
    1SJQ ( Chain: A)
    Nmr Structure Of Rrm1 From Human Polypyrimidine Tract Binding Protein Isoform 1 (Ptb1)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0074982816View alignmentSCOP
    MMDB
    CATH
    2MZS ( Chain: A)
    Nmr Structure Of The Rrm2 Domain Of Hrb1
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c0.0074982921View alignmentSCOP
    MMDB
    CATH
    5CA5 ( Chain: A, B)
    Structure Of The C. Elegans Nono-1 Homodimer
  • PDB_Info
  • PDB_Structure
  • Caenorhabditis elegansChain A = 0.0078994219View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0078994219View alignment
    2U1A ( Chain: A)
    Rna Binding Domain 2 Of Human U1a Protein, Nmr, 20 Structures
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0095993120View alignmentSCOP
    MMDB
    CATH
    2CQI ( Chain: A)
    Solution Structure Of The Rna Binding Domain Of Nucleolysin Tiar
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0095992724View alignmentSCOP
    MMDB
    CATH

    Last updated on 2016-09-15