PDB Homolog: RPP2B/YDR382W Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein RPP2B/YDR382W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-12-05

37 PDB homolog(s) found for yeast gene RPP2B/YDR382W

RPP2B/YDR382W links
  • Locus Info
  • PDB protein structure(s) homologous to RPP2BHomolog Source (per PDB)Protein Alignment: RPP2B vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    3IZS ( Chain: v, w, u, t, s)
    Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain v = 4.1e-296214View alignmentSCOP
    MMDB
    CATH
    Chain w = 4.1e-296214View alignment
    Chain u = 2.4e-105810View alignment
    Chain t = 2.4e-105810View alignment
    Chain s = 6.1e-07698View alignment
    4BEH ( Chain: B, A)
    Solution Structure Of Human Ribosomal Protein P1.p2 Heterodimer
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 5.6e-275619View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.2e-06584View alignment
    3J3B ( Chain: u, v, s, t, q)
    Structure Of The Human 60s Ribosomal Proteins
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain u = 5.6e-275619View alignmentSCOP
    MMDB
    CATH
    Chain v = 5.6e-275619View alignment
    Chain s = 3.2e-06584View alignment
    Chain t = 3.2e-06584View alignment
    Chain q = 1.7e-05479View alignment
    3J61 ( Chain: t, s, v, u, q)
    Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Triticum aestivumChain t = 2.2e-255518View alignmentSCOP
    MMDB
    CATH
    Chain s = 2.2e-255518View alignment
    Chain v = 6.2e-124514View alignment
    Chain u = 6.2e-124514View alignment
    Chain q = 1.2e-054717View alignment
    2W1O ( Chain: A, B)
    Nmr Structure Of Dimerization Domain Of Human Ribosomal Protein P2
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 1.5e-155128View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.5e-155128View alignment
    2LBF ( Chain: B)
    Solution Structure Of The Dimerization Domain Of Human Ribosomal Protein P1P2 HETERODIMER
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.5e-155128View alignmentSCOP
    MMDB
    CATH
    4ULO ( Chain: i)
    Crystal Structure Of Phyllanthoside Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4ULI ( Chain: i)
    Crystal Structure Of Pactamycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4ULD ( Chain: i)
    Crystal Structure Of Nagilactone C Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UL8 ( Chain: i)
    Crystal Structure Of Homoharringtonine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UL3 ( Chain: i)
    Crystal Structure Of Geneticin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UKY ( Chain: i)
    Crystal Structure Of Edeine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UKT ( Chain: i)
    Crystal Structure Of Deoxynivalenol Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UKO ( Chain: h)
    Crystal Structure Of Cryptopleurine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UKJ ( Chain: h)
    Crystal Structure Of Blasticidin S Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UKE ( Chain: i)
    Crystal Structure Of Cycloheximide Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UK3 ( Chain: i)
    Crystal Structure Of Anisomycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UJY ( Chain: h)
    Crystal Structure Of T-2 Toxin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UJO ( Chain: i)
    Crystal Structure Of Lycorine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4ULT ( Chain: h)
    Crystal Structure Of Verrucarin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4UJJ ( Chain: i)
    Crystal Structure Of Narciclasine Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.0e-07698View alignmentSCOP
    MMDB
    CATH
    4B6A ( Chain: q)
    Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex With Arx1 And Rei1
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.1e-07698View alignmentSCOP
    MMDB
    CATH
    3U5I ( Chain: q)
    The Structure Of The Eukaryotic Ribosome At 3.0 A Resolution. This Entry Contains Proteins Of The 60s Subunit, Ribosome B
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.1e-07698View alignmentSCOP
    MMDB
    CATH
    3O5H ( Chain: M)
    Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit.
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae6.1e-07698View alignmentSCOP
    MMDB
    CATH
    1VXY ( Chain: r)
    Structures Of Yeast 80s Ribosome-trna Complexes In The Rotated And Non-rotated Conformations (class I - Non-rotated Ribosome With 2 Trnas, This Entry Contains The Large Ribosomal Subunit Proteins)
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae6.1e-07698View alignmentSCOP
    MMDB
    CATH
    1VXV ( Chain: r)
    Structures Of Yeast 80s Ribosome-trna Complexes In The Rotated And Non-rotated Conformations (class Ii - Rotated Ribosome With 1 Trna, This Entry Contains The Large Ribosomal Subunit Proteins)
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae6.1e-07698View alignmentSCOP
    MMDB
    CATH
    4BYU ( Chain: q)
    Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae6.1e-07698View alignmentSCOP
    MMDB
    CATH
    4BYN ( Chain: q)
    Cryo-em Reconstruction Of The 80s-eif5b-met-itrnamet Eukaryotic Translation Initiation Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae6.1e-07698View alignmentSCOP
    MMDB
    CATH
    3J16 ( Chain: G)
    Models Of Ribosome-Bound Dom34p And Rli1p And Their Ribosomal Binding Partners
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae6.1e-07698View alignmentSCOP
    MMDB
    CATH
    4UJT ( Chain: i)
    Crystal Structure Of Lactimidomycin Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c2.7e-06677View alignmentSCOP
    MMDB
    CATH
    4UK8 ( Chain: i)
    Crystal Structure Of Cca Trinucleotide Bound To The Yeast 80s Ribosome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c2.7e-06677View alignmentSCOP
    MMDB
    CATH
    2ZKR ( Chain: g)
    Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-em Map
  • PDB_Info
  • PDB_Structure
  • Canis lupus familiaris1.7e-05479View alignmentSCOP
    MMDB
    CATH
    3A1Y ( Chain: E, F, D, C, A, B)
    The Structure Of Archaeal Ribosomal Stalk P1/p0 Complex
  • PDB_Info
  • PDB_Structure
  • Pyrococcus horikoshiiChain E = 0.0001603929View alignmentSCOP
    MMDB
    CATH
    Chain F = 0.0001603929View alignment
    Chain D = 0.0001603929View alignment
    Chain C = 0.0001603929View alignment
    Chain A = 0.0001603929View alignment
    Chain B = 0.0001603929View alignment
    1GIY ( Chain: J, I)
    Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilusChain J = 0.0020993819View alignmentSCOP
    MMDB
    CATH
    Chain I = 0.0020993819View alignment
    1DD4 ( Chain: B, A)
    Crystal Structure Of Ribosomal Protein L12 From Thermotoga Maritim
  • PDB_Info
  • PDB_Structure
  • Thermotoga maritimaChain B = 0.0020993819View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0020993819View alignment
    1DD3 ( Chain: B, A)
    Crystal Structure Of Ribosomal Protein L12 From Thermotoga Maritima
  • PDB_Info
  • PDB_Structure
  • Thermotoga maritimaChain B = 0.0020993819View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0020993819View alignment
    1YL3 ( Chain: J, I)
    Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. Large Subunit. The Coordinates For The Small Subunit Are In The Pdb Entry 1yl4.
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilus HB8Chain J = 0.0020993819View alignmentSCOP
    MMDB
    CATH
    Chain I = 0.0020993819View alignment

    Last updated on 2014-12-05