PDB Homolog: SWI5/YDR146C Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein SWI5/YDR146C. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-06-05

53 PDB homolog(s) found for yeast gene SWI5/YDR146C

SWI5/YDR146C links
  • Locus Info
  • PDB protein structure(s) homologous to SWI5Homolog Source (per PDB)Protein Alignment: SWI5 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    1NCS ( Chain: A)
    Nmr Study Of Swi5 Zinc Finger Domain 1
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.0e-211000View alignmentSCOP
    MMDB
    CATH
    2I13 ( Chain: A, B)
    Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain A = 1.4e-134121View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.4e-134121View alignment
    1ZFD ( Chain: A)
    Swi5 Zinc Finger Domain 2, Nmr, 45 Structures
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.4e-131000View alignmentSCOP
    MMDB
    CATH
    2EBT ( Chain: A)
    Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.7e-133822View alignmentSCOP
    MMDB
    CATH
    1MEY ( Chain: F, C, G)
    Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Anolis carolinensisChain F = 6.2e-134123View alignmentSCOP
    MMDB
    CATH
    Chain C = 6.2e-134123View alignment
    Chain G = 6.2e-134123View alignment
    2GLI ( Chain: A)
    Five-Finger GliDNA COMPLEX
  • PDB_Info
  • PDB_Structure
  • Homo sapiens4.4e-123624View alignmentSCOP
    MMDB
    CATH
    4M9E ( Chain: A)
    Structure Of Klf4 Zinc Finger Dna Binding Domain In Complex With Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus5.6e-123523View alignmentSCOP
    MMDB
    CATH
    2WBU ( Chain: A)
    Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus5.6e-123523View alignmentSCOP
    MMDB
    CATH
    2WBS ( Chain: A)
    Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus5.6e-123523View alignmentSCOP
    MMDB
    CATH
    2PRT ( Chain: A)
    Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens5.1e-113522View alignmentSCOP
    MMDB
    CATH
    2JPA ( Chain: A)
    Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens5.1e-113522View alignmentSCOP
    MMDB
    CATH
    2JP9 ( Chain: A)
    Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens5.1e-113522View alignmentSCOP
    MMDB
    CATH
    2EE8 ( Chain: A)
    Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.9e-104016View alignmentSCOP
    MMDB
    CATH
    1UBD ( Chain: C)
    Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.1e-094121View alignmentSCOP
    MMDB
    CATH
    2RPC ( Chain: A)
    Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3
  • PDB_Info
  • PDB_Structure
  • Homo sapiens4.3e-094019View alignmentSCOP
    MMDB
    CATH
    2EPA ( Chain: A)
    Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.3e-093832View alignmentSCOP
    MMDB
    CATH
    2KMK ( Chain: A)
    Gfi-1 Zinc Fingers 3-5 Complexed With Dna
  • PDB_Info
  • PDB_Structure
  • Rattus norvegicus3.1e-083519View alignmentSCOP
    MMDB
    CATH
    1TF3 ( Chain: A)
    Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures
  • PDB_Info
  • PDB_Structure
  • Xenopus laevis4.0e-082821View alignmentSCOP
    MMDB
    CATH
    3W5K ( Chain: B)
    Crystal Structure Of Snail1 And Importin Beta Complex
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.3e-073121View alignmentSCOP
    MMDB
    CATH
    1TF6 ( Chain: A, D)
    Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region
  • PDB_Info
  • PDB_Structure
  • Xenopus laevisChain A = 2.9e-073216View alignmentSCOP
    MMDB
    CATH
    Chain D = 2.9e-073216View alignment
    1UN6 ( Chain: B, C, D)
    The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition
  • PDB_Info
  • PDB_Structure
  • Xenopus laevisChain B = 2.9e-073911View alignmentSCOP
    MMDB
    CATH
    Chain C = 2.9e-073911View alignment
    Chain D = 2.9e-073911View alignment
    2HGH ( Chain: A)
    Transcription Factor Iiia Zinc Fingers 4-6 Bound To 5s Rrna 55mer (Nmr Structure)
  • PDB_Info
  • PDB_Structure
  • Xenopus laevis2.9e-073911View alignmentSCOP
    MMDB
    CATH
    2J7J ( Chain: A)
    Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes
  • PDB_Info
  • PDB_Structure
  • Xenopus laevis2.9e-073911View alignmentSCOP
    MMDB
    CATH
    1A1J ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcgt Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus7.9e-073220View alignmentSCOP
    MMDB
    CATH
    1A1I ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus7.9e-073220View alignmentSCOP
    MMDB
    CATH
    1A1K ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus7.9e-073220View alignmentSCOP
    MMDB
    CATH
    1JK1 ( Chain: A)
    Zif268 D20a Mutant Bound To Wt Dna Site
  • PDB_Info
  • PDB_Structure
  • Mus musculus9.9e-073219View alignmentSCOP
    MMDB
    CATH
    1JK2 ( Chain: A)
    Zif268 D20a Mutant Bound To The Gct Dna Site
  • PDB_Info
  • PDB_Structure
  • Mus musculus9.9e-073219View alignmentSCOP
    MMDB
    CATH
    1A1F ( Chain: A)
    Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.3e-063219View alignmentSCOP
    MMDB
    CATH
    1ZAA ( Chain: C)
    Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.3e-063219View alignmentSCOP
    MMDB
    CATH
    1A1G ( Chain: A)
    Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gcgt Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.3e-063219View alignmentSCOP
    MMDB
    CATH
    1A1L ( Chain: A)
    Zif268 Zinc Finger-Dna Complex (Gcac Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.3e-063219View alignmentSCOP
    MMDB
    CATH
    1AAY ( Chain: A)
    Zif268 Zinc Finger-Dna Complex
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.3e-063219View alignmentSCOP
    MMDB
    CATH
    1P47 ( Chain: B, A)
    Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain B = 1.3e-063219View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.3e-063219View alignment
    2YT9 ( Chain: A)
    Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.7e-063713View alignmentSCOP
    MMDB
    CATH
    1A1H ( Chain: A)
    Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.7e-063121View alignmentSCOP
    MMDB
    CATH
    1G2D ( Chain: F, C)
    Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2)
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain F = 7.2e-063026View alignmentSCOP
    MMDB
    CATH
    Chain C = 7.2e-063026View alignment
    1G2F ( Chain: F, C)
    Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6)
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain F = 1.1e-053023View alignmentSCOP
    MMDB
    CATH
    Chain C = 1.1e-053023View alignment
    1X6E ( Chain: A)
    Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.1e-054019View alignmentSCOP
    MMDB
    CATH
    2RSJ ( Chain: A)
    Solution Structures Of The Dna-binding Domains Of Immune-related Zinc- Finger Protein Zfat
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.1e-053020View alignmentSCOP
    MMDB
    CATH
    2DLQ ( Chain: A)
    Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.5e-053019View alignmentSCOP
    MMDB
    CATH
    2DLK ( Chain: A)
    Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.4e-053414View alignmentSCOP
    MMDB
    CATH
    2M9A ( Chain: A)
    Solution Nmr Structure Of E3 Ubiquitin-protein Ligase Zfp91 From Homo Sapiens, Northeast Structural Genomics Consortium (nesg) Target Hr7784a
  • PDB_Info
  • PDB_Structure
  • Homo sapiens4.0e-052922View alignmentSCOP
    MMDB
    CATH
    1F2I ( Chain: I, G, J, K, L, H)
    Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain I = 8.4e-053918View alignmentSCOP
    MMDB
    CATH
    Chain G = 8.4e-053918View alignment
    Chain J = 8.4e-053918View alignment
    Chain K = 8.4e-053918View alignment
    Chain L = 8.4e-053918View alignment
    Chain H = 8.4e-053918View alignment
    2COT ( Chain: A)
    Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435
  • PDB_Info
  • PDB_Structure
  • Homo sapiens8.4e-054113View alignmentSCOP
    MMDB
    CATH
    2ADR ( Chain: A)
    Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae0.0001393924View alignmentSCOP
    MMDB
    CATH
    1X6H ( Chain: A)
    Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0001393514View alignmentSCOP
    MMDB
    CATH
    4GZN ( Chain: C)
    Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0002893813View alignmentSCOP
    MMDB
    CATH
    4M9V ( Chain: F, C)
    Zfp57 Mutant (e182q) In Complex With 5-carboxylcytosine Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain F = 0.0004793811View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0004793811View alignment
    2DMD ( Chain: A)
    Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0007803115View alignmentSCOP
    MMDB
    CATH
    4IS1 ( Chain: C, D)
    Crystal Structure Of Znf217 Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 0.0044003518View alignmentSCOP
    MMDB
    CATH
    Chain D = 0.0044003518View alignment
    4F2J ( Chain: C)
    Crystal Structure Of Znf217 Bound To Dna, P6522 Crystal Form
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0044003518View alignmentSCOP
    MMDB
    CATH
    3UK3 ( Chain: D, C)
    Crystal Structure Of Znf217 Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain D = 0.0044003518View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0044003518View alignment

    Last updated on 2014-06-05