Take our Survey

PDB Homolog: DOA4/YDR069C Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein DOA4/YDR069C. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-06-05

17 PDB homolog(s) found for yeast gene DOA4/YDR069C

DOA4/YDR069C links
  • Locus Info
  • PDB protein structure(s) homologous to DOA4Homolog Source (per PDB)Protein Alignment: DOA4 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    2Y6E ( Chain: C, B, A, E, D, F)
    Ubiquitin Specific Protease 4 Is Inhibited By Its Ubiquitin- Like Domain
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 1.0e-513613View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.0e-513613View alignment
    Chain A = 1.0e-513613View alignment
    Chain E = 1.0e-513613View alignment
    Chain D = 1.0e-513613View alignment
    Chain F = 1.0e-513613View alignment
    3N3K ( Chain: A)
    The Catalytic Domain Of Usp8 In Complex With A Usp8 Specific Inhibitor
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.9e-483616View alignmentSCOP
    MMDB
    CATH
    2GFO ( Chain: A)
    Structure Of The Catalytic Domain Of Human Ubiquitin Carboxyl-terminal Hydrolase 8
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.5e-473615View alignmentSCOP
    MMDB
    CATH
    3I3T ( Chain: E, C, G, A)
    Crystal Structure Of Covalent Ubiquitin-usp21 Complex
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain E = 2.2e-423319View alignmentSCOP
    MMDB
    CATH
    Chain C = 2.2e-423319View alignment
    Chain G = 2.2e-423319View alignment
    Chain A = 2.2e-423319View alignment
    3MTN ( Chain: C, A)
    Usp21 In Complex With A Ubiquitin-based, Usp21-specific Inhibitor
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain C = 2.2e-423319View alignmentSCOP
    MMDB
    CATH
    Chain A = 2.2e-423319View alignment
    2Y5B ( Chain: E, A)
    Structure Of Usp21 In Complex With Linear Diubiquitin-Aldehyde
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain E = 2.2e-423319View alignmentSCOP
    MMDB
    CATH
    Chain A = 2.2e-423319View alignment
    3V6C ( Chain: A)
    Crystal Structure Of Usp2 In Complex With Mutated Ubiquitin
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.1e-413515View alignmentSCOP
    MMDB
    CATH
    2HD5 ( Chain: A)
    Usp2 In Complex With Ubiquitin
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.1e-413515View alignmentSCOP
    MMDB
    CATH
    3V6E ( Chain: A)
    Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.1e-413515View alignmentSCOP
    MMDB
    CATH
    2IBI ( Chain: A)
    Covalent Ubiquitin-Usp2 Complex
  • PDB_Info
  • PDB_Structure
  • Homo sapiens1.6e-403415View alignmentSCOP
    MMDB
    CATH
    3NHE ( Chain: A)
    High Resolution Structure (1.26a) Of Usp2a In Complex With Ubiquitin
  • PDB_Info
  • PDB_Structure
  • Homo sapiens3.3e-403415View alignmentSCOP
    MMDB
    CATH
    4FK5 ( Chain: A)
    Structure Of The Saga Ubp8(S144n)SGF11SUS1SGF73 DUB MODULE
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288c6.8e-262918View alignmentSCOP
    MMDB
    CATH
    4FIP ( Chain: A, E)
    Structure Of The Saga Ubp8(S144n)SGF11(1-72, Delta-Znf)SUS1SGF73 Dub Module
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain A = 6.8e-262918View alignmentSCOP
    MMDB
    CATH
    Chain E = 6.8e-262918View alignment
    3M99 ( Chain: A)
    Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.5e-252918View alignmentSCOP
    MMDB
    CATH
    4FJC ( Chain: E, A)
    Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73 DUB Module
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain E = 2.7e-252918View alignmentSCOP
    MMDB
    CATH
    Chain A = 2.7e-252918View alignment
    3MHH ( Chain: A)
    Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.7e-252918View alignmentSCOP
    MMDB
    CATH
    3MHS ( Chain: A)
    Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE BOUND Ubiquitin Aldehyde
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.7e-252918View alignmentSCOP
    MMDB
    CATH

    Last updated on 2014-06-05