PDB Homolog: RPN4/YDL020C Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein RPN4/YDL020C. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-12-05

13 PDB homolog(s) found for yeast gene RPN4/YDL020C

RPN4/YDL020C links
  • Locus Info
  • PDB protein structure(s) homologous to RPN4Homolog Source (per PDB)Protein Alignment: RPN4 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    1A1I ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0026004312View alignmentSCOP
    MMDB
    CATH
    1A1K ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0026004312View alignmentSCOP
    MMDB
    CATH
    1A1J ( Chain: A)
    Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcgt Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0026004312View alignmentSCOP
    MMDB
    CATH
    1JK2 ( Chain: A)
    Zif268 D20a Mutant Bound To The Gct Dna Site
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0069014114View alignmentSCOP
    MMDB
    CATH
    1JK1 ( Chain: A)
    Zif268 D20a Mutant Bound To Wt Dna Site
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0069014114View alignmentSCOP
    MMDB
    CATH
    1P47 ( Chain: A, B)
    Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain A = 0.0088004114View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0088004114View alignment
    1ZAA ( Chain: C)
    Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0088004114View alignmentSCOP
    MMDB
    CATH
    1F2I ( Chain: G, H, I, J, K, L)
    Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain G = 0.0088004114View alignmentSCOP
    MMDB
    CATH
    Chain H = 0.0088004114View alignment
    Chain I = 0.0088004114View alignment
    Chain J = 0.0088004114View alignment
    Chain K = 0.0088004114View alignment
    Chain L = 0.0088004114View alignment
    1A1L ( Chain: A)
    Zif268 Zinc Finger-Dna Complex (Gcac Site)
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0088004114View alignmentSCOP
    MMDB
    CATH
    1AAY ( Chain: A)
    Zif268 Zinc Finger-Dna Complex
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0088004114View alignmentSCOP
    MMDB
    CATH
    4R2D ( Chain: A)
    Egr1/zif268 Zinc Fingers In Complex With Formylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0088004114View alignmentSCOP
    MMDB
    CATH
    4R2A ( Chain: A)
    Egr1/zif268 Zinc Fingers In Complex With Methylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0088004114View alignmentSCOP
    MMDB
    CATH
    4R2C ( Chain: A)
    Egr1/zif268 Zinc Fingers In Complex With Hydroxymethylated Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0088004114View alignmentSCOP
    MMDB
    CATH

    Last updated on 2014-12-05