PDB Homolog: MATALPHA2/YCR039C Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein MATALPHA2/YCR039C. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2016-09-15

24 PDB homolog(s) found for yeast gene MATALPHA2/YCR039C

MATALPHA2/YCR039C links
  • Locus Info
  • PDB protein structure(s) homologous to MATALPHA2Homolog Source (per PDB)Protein Alignment: MATALPHA2 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    1MNM ( Chain: C, D)
    Yeast Matalpha2MCM1DNA TERNARY TRANSCRIPTION COMPLEX Crystal Structure
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain C = 8.3e-431000View alignmentSCOP
    MMDB
    CATH
    Chain D = 8.3e-431000View alignment
    1APL ( Chain: C, D)
    Crystal Structure Of A Mat-Alpha2 Homeodomain-Operator Complex Suggests A General Model For Homeodomain-Dna Interactions
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain C = 1.7e-401000View alignmentSCOP
    MMDB
    CATH
    Chain D = 1.7e-401000View alignment
    1YRN ( Chain: B)
    Crystal Structure Of The Mata1MATALPHA2 HOMEODOMAIN Heterodimer Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.7e-401000View alignmentSCOP
    MMDB
    CATH
    1AKH ( Chain: B)
    Mat A1ALPHA2DNA TERNARY COMPLEX
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.7e-401000View alignmentSCOP
    MMDB
    CATH
    1LE8 ( Chain: B)
    Crystal Structure Of The Mata1MATALPHA2-3a Heterodimer Bound To Dna Complex
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.0e-38962View alignmentSCOP
    MMDB
    CATH
    1K61 ( Chain: A, D, C, B)
    Matalpha2 Homeodomain Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae S288cChain A = 3.4e-281000View alignmentSCOP
    MMDB
    CATH
    Chain D = 3.4e-281000View alignment
    Chain C = 3.4e-281000View alignment
    Chain B = 3.4e-281000View alignment
    4CYC ( Chain: B)
    Crystal Structure Of A Ubx-exd-dna Complex Including The Hexapeptide And Ubda Motifs
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster4.8e-053420View alignmentSCOP
    MMDB
    CATH
    4UUS ( Chain: F, B)
    Crystal Structure Of A Ubx-exd-dna Complex Including The Ubda Motif
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogasterChain F = 4.8e-053420View alignmentSCOP
    MMDB
    CATH
    Chain B = 4.8e-053420View alignment
    1LFU ( Chain: P)
    Nmr Solution Stucture Of The Extended Pbx Homeodomain Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Mus musculus6.3e-053022View alignmentSCOP
    MMDB
    CATH
    1B72 ( Chain: B)
    Pbx1, Homeobox Protein Hox-B1DNA TERNARY COMPLEX
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0001103021View alignmentSCOP
    MMDB
    CATH
    1PUF ( Chain: B)
    Crystal Structure Of Hoxa9 And Pbx1 Homeodomains Bound To Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0001393219View alignmentSCOP
    MMDB
    CATH
    1DU6 ( Chain: A)
    Solution Structure Of The Truncated Pbx Homeodomain
  • PDB_Info
  • PDB_Structure
  • Mus musculus0.0003093018View alignmentSCOP
    MMDB
    CATH
    2LK2 ( Chain: A)
    Solution Nmr Structure Of Homeobox Domain (171-248) Of Human Homeobox Protein Tgif1, Northeast Structural Genomics Consortium Target Hr4411b
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0003093418View alignmentSCOP
    MMDB
    CATH
    1B8I ( Chain: B)
    Structure Of The Homeotic UbxEXDDNA TERNARY COMPLEX
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster0.0005103222View alignmentSCOP
    MMDB
    CATH
    2R5Y ( Chain: B)
    Structure Of ScrEXD COMPLEX BOUND TO A CONSENSUS HOX-Exd Site
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster0.0005103222View alignmentSCOP
    MMDB
    CATH
    2R5Z ( Chain: B)
    Structure Of ScrEXD COMPLEX BOUND TO A DNA SEQUENCE Derived From The Fkh Gene
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster0.0005103222View alignmentSCOP
    MMDB
    CATH
    2DMN ( Chain: A)
    The Solution Structure Of The Homeobox Domain Of Human Homeobox Protein Tgif2lx
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0008593518View alignmentSCOP
    MMDB
    CATH
    5BNG ( Chain: A, B)
    Monomer Of Tale Type Homeobox Transcription Factor Meis1 Complexes With Specific Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0011002928View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0011002928View alignment
    4XRS ( Chain: A, B)
    Heterodimeric Complex Of Transcription Factors Meis1 And Dlx3 On Specific Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0011002928View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0011002928View alignment
    4XRM ( Chain: B, A)
    Homodimer Of Tale Type Homeobox Transcription Factor Meis1 Complexes With Specific Dna
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 0.0011002928View alignmentSCOP
    MMDB
    CATH
    Chain A = 0.0011002928View alignment
    3K2A ( Chain: A, B)
    Crystal Structure Of The Homeobox Domain Of Human Homeobox Protein Meis2
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 0.0024002926View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0024002926View alignment
    1X2N ( Chain: A)
    Solution Structure Of The Homeobox Domain Of Human Homeobox Protein Pknox1
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0040013020View alignmentSCOP
    MMDB
    CATH
    2DMT ( Chain: A)
    Solution Structure Of The Homeobox Domain Of Homeobox Protein Barh-Like 1
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0040013714View alignmentSCOP
    MMDB
    CATH
    2DA5 ( Chain: A)
    Solution Structure Of The Second Homeobox Domain Of Zinc Fingers And Homeoboxes Protein 3 (Triple Homeobox 1 Protein)
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0052003819View alignmentSCOP
    MMDB
    CATH

    Last updated on 2016-09-15