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PDB Homolog: SEC18/YBR080C Help



This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein SEC18/YBR080C. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
 
Last updated on 2014-06-05

55 PDB homolog(s) found for yeast gene SEC18/YBR080C

SEC18/YBR080C links
  • Locus Info
  • PDB protein structure(s) homologous to SEC18Homolog Source (per PDB)Protein Alignment: SEC18 vs. HomologExternal Links
    P-Value%Identical%SimilarAlignment
    1CR5 ( Chain: A, B, C)
    N-Terminal Domain Of Sec18p
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 4.0e-1001000View alignmentSCOP
    MMDB
    CATH
    Chain B = 4.0e-1001000View alignment
    Chain C = 4.0e-1001000View alignment
    1NSF ( Chain: A)
    D2 Hexamerization Domain Of N-Ethylmaleimide Sensitive Factor (Nsf)
  • PDB_Info
  • PDB_Structure
  • Cricetulus griseus3.0e-464421View alignmentSCOP
    MMDB
    CATH
    1D2N ( Chain: A)
    D2 Domain Of N-Ethylmaleimide-Sensitive Fusion Protein
  • PDB_Info
  • PDB_Structure
  • Cricetulus griseus3.9e-454421View alignmentSCOP
    MMDB
    CATH
    3H4M ( Chain: B, C, A)
    Aaa Atpase Domain Of The Proteasome- Activating Nucleotidase
  • PDB_Info
  • PDB_Structure
  • Methanocaldococcus jannaschiiChain B = 1.3e-404020View alignmentSCOP
    MMDB
    CATH
    Chain C = 1.3e-404020View alignment
    Chain A = 1.3e-404020View alignment
    1R7R ( Chain: A)
    The Crystal Structure Of Murine P97VCP AT 3.6A
  • PDB_Info
  • PDB_Structure
  • Mus musculus1.7e-393319View alignmentSCOP
    MMDB
    CATH
    3CF2 ( Chain: B, C, D, A)
    Structure Of P97VCP IN COMPLEX WITH ADPAMP-Pnp
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain B = 2.0e-393319View alignmentSCOP
    MMDB
    CATH
    Chain C = 2.0e-393319View alignment
    Chain D = 2.0e-393319View alignment
    Chain A = 2.0e-393319View alignment
    3CF3 ( Chain: A, B, C)
    Structure Of P97VCP IN COMPLEX WITH ADP
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain A = 2.0e-393319View alignmentSCOP
    MMDB
    CATH
    Chain B = 2.0e-393319View alignment
    Chain C = 2.0e-393319View alignment
    3CF1 ( Chain: C, B, A)
    Structure Of P97VCP IN COMPLEX WITH ADPADP.ALFX
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain C = 2.0e-393319View alignmentSCOP
    MMDB
    CATH
    Chain B = 2.0e-393319View alignment
    Chain A = 2.0e-393319View alignment
    3CF0 ( Chain: A, B, C, D, E, F, N, H, I, J, K, L, M, G)
    Structure Of D2 Subdomain Of P97VCP IN COMPLEX WITH ADP
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain A = 1.4e-383818View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.4e-383818View alignment
    Chain C = 1.4e-383818View alignment
    Chain D = 1.4e-383818View alignment
    Chain E = 1.4e-383818View alignment
    Chain F = 1.4e-383818View alignment
    Chain N = 1.4e-383818View alignment
    Chain H = 1.4e-383818View alignment
    Chain I = 1.4e-383818View alignment
    Chain J = 1.4e-383818View alignment
    Chain K = 1.4e-383818View alignment
    Chain L = 1.4e-383818View alignment
    Chain M = 1.4e-383818View alignment
    Chain G = 1.4e-383818View alignment
    4KLN ( Chain: B, A, C, F, E, D)
    Structure Of P97 N-d1 A232e Mutant In Complex With Atpgs
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 5.1e-373721View alignmentSCOP
    MMDB
    CATH
    Chain A = 5.1e-373721View alignment
    Chain C = 5.1e-373721View alignment
    Chain F = 5.1e-373721View alignment
    Chain E = 5.1e-373721View alignment
    Chain D = 5.1e-373721View alignment
    3HU1 ( Chain: A, C, D, E, F, B)
    Structure Of P97 N-D1 R95g Mutant In Complex With Atpgs
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 8.4e-373720View alignmentSCOP
    MMDB
    CATH
    Chain C = 8.4e-373720View alignment
    Chain D = 8.4e-373720View alignment
    Chain E = 8.4e-373720View alignment
    Chain F = 8.4e-373720View alignment
    Chain B = 8.4e-373720View alignment
    4KOD ( Chain: L, A, B, C, D, E, F, G, H, K, J, I)
    Structure Of P97 N-d1 R155h Mutant In Complex With Adp
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain L = 8.4e-373720View alignmentSCOP
    MMDB
    CATH
    Chain A = 8.4e-373720View alignment
    Chain B = 8.4e-373720View alignment
    Chain C = 8.4e-373720View alignment
    Chain D = 8.4e-373720View alignment
    Chain E = 8.4e-373720View alignment
    Chain F = 8.4e-373720View alignment
    Chain G = 8.4e-373720View alignment
    Chain H = 8.4e-373720View alignment
    Chain K = 8.4e-373720View alignment
    Chain J = 8.4e-373720View alignment
    Chain I = 8.4e-373720View alignment
    3HU2 ( Chain: A, B, C, D, E, F)
    Structure Of P97 N-D1 R86a Mutant In Complex With Atpgs
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 8.4e-373720View alignmentSCOP
    MMDB
    CATH
    Chain B = 8.4e-373720View alignment
    Chain C = 8.4e-373720View alignment
    Chain D = 8.4e-373720View alignment
    Chain E = 8.4e-373720View alignment
    Chain F = 8.4e-373720View alignment
    3HU3 ( Chain: A, B)
    Structure Of P97 N-D1 R155h Mutant In Complex With Atpgs
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 8.4e-373720View alignmentSCOP
    MMDB
    CATH
    Chain B = 8.4e-373720View alignment
    4KO8 ( Chain: A, B)
    Structure Of P97 N-d1 R155h Mutant In Complex With Atpgs
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain A = 8.4e-373720View alignmentSCOP
    MMDB
    CATH
    Chain B = 8.4e-373720View alignment
    1S3S ( Chain: A, B, C, D, E, F)
    Crystal Structure Of Aaa Atpase P97VCP ND1 IN COMPLEX WITH P47 C
  • PDB_Info
  • PDB_Structure
  • Mus musculusChain A = 2.9e-363819View alignmentSCOP
    MMDB
    CATH
    Chain B = 2.9e-363819View alignment
    Chain C = 2.9e-363819View alignment
    Chain D = 2.9e-363819View alignment
    Chain E = 2.9e-363819View alignment
    Chain F = 2.9e-363819View alignment
    1E32 ( Chain: A)
    Structure Of The N-Terminal Domain And The D1 Aaa Domain Of Membrane Fusion Atpase P97
  • PDB_Info
  • PDB_Structure
  • Mus musculus2.9e-363819View alignmentSCOP
    MMDB
    CATH
    2CE7 ( Chain: C, B, A, D, E, F)
    Edta Treated
  • PDB_Info
  • PDB_Structure
  • Thermotoga maritimaChain C = 3.8e-323519View alignmentSCOP
    MMDB
    CATH
    Chain B = 3.8e-323519View alignment
    Chain A = 3.8e-323519View alignment
    Chain D = 3.8e-323519View alignment
    Chain E = 3.8e-323519View alignment
    Chain F = 3.8e-323519View alignment
    2CEA ( Chain: F, E, A, B, C, D)
    Cell Division Protein Ftsh
  • PDB_Info
  • PDB_Structure
  • Thermotoga maritimaChain F = 3.8e-323519View alignmentSCOP
    MMDB
    CATH
    Chain E = 3.8e-323519View alignment
    Chain A = 3.8e-323519View alignment
    Chain B = 3.8e-323519View alignment
    Chain C = 3.8e-323519View alignment
    Chain D = 3.8e-323519View alignment
    4CR3 ( Chain: H, J, L, M, K, I)
    Deep Classification Of A Large Cryo-em Dataset Defines The Conformational Landscape Of The 26s Proteasome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain H = 1.2e-313914View alignmentSCOP
    MMDB
    CATH
    Chain J = 2.7e-313620View alignment
    Chain L = 7.6e-313717View alignment
    Chain M = 6.6e-293418View alignment
    Chain K = 6.2e-283419View alignment
    Chain I = 4.2e-263221View alignment
    4CR2 ( Chain: H, J, L, M, K, I)
    Deep Classification Of A Large Cryo-em Dataset Defines The Conformational Landscape Of The 26s Proteasome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain H = 1.2e-313914View alignmentSCOP
    MMDB
    CATH
    Chain J = 2.7e-313620View alignment
    Chain L = 7.6e-313717View alignment
    Chain M = 6.6e-293418View alignment
    Chain K = 6.2e-283419View alignment
    Chain I = 4.2e-263221View alignment
    4CR4 ( Chain: H, J, L, M, K, I)
    Deep Classification Of A Large Cryo-em Dataset Defines The Conformational Landscape Of The 26s Proteasome
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain H = 1.2e-313914View alignmentSCOP
    MMDB
    CATH
    Chain J = 2.7e-313620View alignment
    Chain L = 7.6e-313717View alignment
    Chain M = 6.6e-293418View alignment
    Chain K = 6.2e-283419View alignment
    Chain I = 4.2e-263221View alignment
    3KDS ( Chain: G, E, F)
    Apo-ftsh Crystal Structure
  • PDB_Info
  • PDB_Structure
  • Thermotoga maritimaChain G = 1.6e-313518View alignmentSCOP
    MMDB
    CATH
    Chain E = 1.6e-313518View alignment
    Chain F = 1.6e-313518View alignment
    1LV7 ( Chain: A)
    Crystal Structure Of The Aaa Domain Of Ftsh
  • PDB_Info
  • PDB_Structure
  • Escherichia coli1.6e-313921View alignmentSCOP
    MMDB
    CATH
    1IY1 ( Chain: A)
    Crystal Structure Of The Ftsh Atpase Domain With Adp From Thermus Thermophilus
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilus7.2e-303718View alignmentSCOP
    MMDB
    CATH
    1IY0 ( Chain: A)
    Crystal Structure Of The Ftsh Atpase Domain With Amp-Pnp From Thermus Thermophilus
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilus7.2e-303718View alignmentSCOP
    MMDB
    CATH
    1IY2 ( Chain: A)
    Crystal Structure Of The Ftsh Atpase Domain From Thermus Thermophilus
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilus7.2e-303718View alignmentSCOP
    MMDB
    CATH
    1IXZ ( Chain: A)
    Crystal Structure Of The Ftsh Atpase Domain From Thermus Thermophilus
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilus7.2e-303718View alignmentSCOP
    MMDB
    CATH
    2X8A ( Chain: A)
    Human Nuclear Valosin Containing Protein Like (Nvl), C- Terminal Aaa-Atpase Domain
  • PDB_Info
  • PDB_Structure
  • Homo sapiens4.0e-293419View alignmentSCOP
    MMDB
    CATH
    2DHR ( Chain: A, B, C, D, E, F)
    Whole Cytosolic Region Of Atp-Dependent Metalloprotease Ftsh (G399l)
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilusChain A = 2.8e-283718View alignmentSCOP
    MMDB
    CATH
    Chain B = 2.8e-283718View alignment
    Chain C = 2.8e-283718View alignment
    Chain D = 2.8e-283718View alignment
    Chain E = 2.8e-283718View alignment
    Chain F = 2.8e-283718View alignment
    4EIW ( Chain: C, A, B, D, E, F)
    Whole Cytosolic Region Of Atp-Dependent Metalloprotease Ftsh (G399l)
  • PDB_Info
  • PDB_Structure
  • Thermus thermophilus HB8Chain C = 3.4e-283718View alignmentSCOP
    MMDB
    CATH
    Chain A = 3.4e-283718View alignment
    Chain B = 3.4e-283718View alignment
    Chain D = 3.4e-283718View alignment
    Chain E = 3.4e-283718View alignment
    Chain F = 3.4e-283718View alignment
    2R65 ( Chain: C, D, E, A, B)
    Crystal Structure Of Helicobacter Pylori Atp Dependent Protease, Ftsh Adp Complex
  • PDB_Info
  • PDB_Structure
  • Helicobacter pyloriChain C = 6.2e-283321View alignmentSCOP
    MMDB
    CATH
    Chain D = 6.2e-283321View alignment
    Chain E = 6.2e-283321View alignment
    Chain A = 6.2e-283321View alignment
    Chain B = 6.2e-283321View alignment
    2R62 ( Chain: A, B)
    Crystal Structure Of Helicobacter Pylori Atp Dependent Protease, Ftsh
  • PDB_Info
  • PDB_Structure
  • Helicobacter pyloriChain A = 6.2e-283321View alignmentSCOP
    MMDB
    CATH
    Chain B = 6.2e-283321View alignment
    4LGM ( Chain: A)
    Crystal Structure Of Sulfolobus Solfataricus Vps4
  • PDB_Info
  • PDB_Structure
  • Sulfolobus solfataricus P22.5e-263123View alignmentSCOP
    MMDB
    CATH
    2QZ4 ( Chain: A)
    Human Paraplegin, Aaa Domain In Complex With Adp
  • PDB_Info
  • PDB_Structure
  • Homo sapiens2.4e-253517View alignmentSCOP
    MMDB
    CATH
    4LCB ( Chain: A)
    Structure Of Vps4 Homolog From Acidianus Hospitalis
  • PDB_Info
  • PDB_Structure
  • Acidianus hospitalis W16.0e-243021View alignmentSCOP
    MMDB
    CATH
    2RKO ( Chain: A)
    Crystal Structure Of The Vps4p-Dimer
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae2.4e-223020View alignmentSCOP
    MMDB
    CATH
    3EIH ( Chain: C, B, A)
    Crystal Structure Of S.Cerevisiae Vps4 In The Presence Of Atpgammas
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain C = 1.3e-213020View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.3e-213020View alignment
    Chain A = 1.3e-213020View alignment
    3B9P ( Chain: A)
    Spastin
  • PDB_Info
  • PDB_Structure
  • Drosophila melanogaster7.9e-213021View alignmentSCOP
    MMDB
    CATH
    3EIE ( Chain: A)
    Crystal Structure Of S.Cerevisiae Vps4 In The So4-Bound State
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae9.9e-213021View alignmentSCOP
    MMDB
    CATH
    1QDN ( Chain: C, A, B)
    Amino Terminal Domain Of The N-Ethylmaleimide Sensitive Fusion Protein (Nsf)
  • PDB_Info
  • PDB_Structure
  • Cricetulus griseusChain C = 1.3e-202826View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.3e-202826View alignment
    Chain B = 1.3e-202826View alignment
    2QP9 ( Chain: X)
    Crystal Structure Of S.Cerevisiae Vps4
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiae1.5e-203021View alignmentSCOP
    MMDB
    CATH
    2QPA ( Chain: A, B, C)
    Crystal Structure Of S.Cerevisiae Vps4 In The Presence Of Adp
  • PDB_Info
  • PDB_Structure
  • Saccharomyces cerevisiaeChain A = 1.5e-203021View alignmentSCOP
    MMDB
    CATH
    Chain B = 1.5e-203021View alignment
    Chain C = 1.5e-203021View alignment
    1XWI ( Chain: A)
    Crystal Structure Of Vps4b
  • PDB_Info
  • PDB_Structure
  • Homo sapiens5.7e-203119View alignmentSCOP
    MMDB
    CATH
    1QCS ( Chain: A)
    N-Terminal Domain Of N-Ethylmaleimide Sensitive Factor (Nsf)
  • PDB_Info
  • PDB_Structure
  • Cricetulus griseus1.4e-192824View alignmentSCOP
    MMDB
    CATH
    2ZAN ( Chain: A)
    Crystal Structure Of Mouse Skd1/vps4b Atp-form
  • PDB_Info
  • PDB_Structure
  • Mus musculus4.9e-183119View alignmentSCOP
    MMDB
    CATH
    2ZAO ( Chain: A)
    Crystal Structure Of Mouse Skd1/vps4b Adp-form
  • PDB_Info
  • PDB_Structure
  • Mus musculus4.9e-183119View alignmentSCOP
    MMDB
    CATH
    2ZAM ( Chain: A)
    Crystal Structure Of Mouse Skd1/vps4b Apo-form
  • PDB_Info
  • PDB_Structure
  • Mus musculus4.9e-183119View alignmentSCOP
    MMDB
    CATH
    3VFD ( Chain: A)
    Human Spastin Aaa Domain
  • PDB_Info
  • PDB_Structure
  • Homo sapiens7.1e-183021View alignmentSCOP
    MMDB
    CATH
    4L15 ( Chain: A)
    Crystal Structure Of Figl-1 Aaa Domain
  • PDB_Info
  • PDB_Structure
  • Caenorhabditis elegans9.5e-183118View alignmentSCOP
    MMDB
    CATH
    4L16 ( Chain: A)
    Crystal Structure Of Figl-1 Aaa Domain In Complex With Adp
  • PDB_Info
  • PDB_Structure
  • Caenorhabditis elegans9.5e-183118View alignmentSCOP
    MMDB
    CATH
    3D8B ( Chain: B, A)
    Crystal Structure Of Human Fidgetin-Like Protein 1 In Complex With Adp
  • PDB_Info
  • PDB_Structure
  • Homo sapiensChain B = 1.8e-173116View alignmentSCOP
    MMDB
    CATH
    Chain A = 1.8e-173116View alignment
    1OFH ( Chain: B, C, A)
    Asymmetric Complex Between Hslv And I-domain Deleted Hslu (h. Influenzae)
  • PDB_Info
  • PDB_Structure
  • Haemophilus influenzae Rd KW20Chain B = 0.0026002816View alignmentSCOP
    MMDB
    CATH
    Chain C = 0.0026002816View alignment
    Chain A = 0.0026002816View alignment
    1OFI ( Chain: A, B, C)
    Asymmetric Complex Between Hslv And I-Domain Deleted Hslu (H. Influenzae)
  • PDB_Info
  • PDB_Structure
  • Haemophilus influenzae Rd KW20Chain A = 0.0026002816View alignmentSCOP
    MMDB
    CATH
    Chain B = 0.0026002816View alignment
    Chain C = 0.0026002816View alignment
    2KRK ( Chain: A)
    Solution Nmr Structure Of 26s Protease Regulatory Subunit 8 From H.Sapiens, Northeast Structural Genomics Consortium Target Target Hr3102a
  • PDB_Info
  • PDB_Structure
  • Homo sapiens0.0061023326View alignmentSCOP
    MMDB
    CATH

    Last updated on 2014-06-05