Alignment of ALD6/YPL061W and PDB 3RHJ (chain C)

This page compares a protein of known structure to the Saccharomyces cerevisiae protein ALD6/YPL061W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.

Alignment of yeast gene ALD6/YPL061W and PDB protein 3RHJ (chain C)	Jump to Structure

Alignment Details

ALD6 length = 501 aa

Alignment Length = 479 aa (95.6%)

P-value = 1.8e-101

%Identity = 42

%Similar = 19

Alignment Position

Sequence Alignment

ALD6	18	`N`	`G`	`L`	`T`	`Y`	`E`	`Q`	`P`	`T`	`G`	`L`	`F`	`I`	`N`	`N`	`K`	`F`	`M`	`K`	`A`	`Q`	`D`	`G`	`K`	`T`	`Y`	`P`	`V`	`E`	`D`	`P`	`S`	`T`	`E`	`N`	`T`	`V`	`C`	`E`	`V`	`S`	`S`	`A`	`T`	`T`	`E`	`D`	`V`	`E`	`Y`	`A`	`I`	`E`	`C`	`A`	`D`	`R`	`A`	`F`	`H`	77
		`N`		`L`	`T`		`+`		`P`			`L`	`F`	`I`			`+`	`F`	`+`		`A`	`+`			`K`	`T`	`Y`				`+`	`P`	`+`			`+`		`+`	`C`	`+`	`V`	`S`		`A`				`D`	`V`	`+`		`A`	`+`			`A`			`A`	`F`
3RHJ_(C)	29	`N`	`K`	`L`	`T`	`L`	`Q`	`M`	`P`	`Y`	`Q`	`L`	`F`	`I`	`G`	`G`	`E`	`F`	`V`	`D`	`A`	`E`	`G`	`S`	`K`	`T`	`Y`	`N`	`T`	`I`	`N`	`P`	`T`	`D`	`G`	`S`	`V`	`I`	`C`	`Q`	`V`	`S`	`L`	`A`	`Q`	`V`	`S`	`D`	`V`	`D`	`K`	`A`	`V`	`A`	`A`	`A`	`K`	`E`	`A`	`F`	`E`	88

ALD6	78	`D`	`T`	`E`	`W`	`A`	`T`	`Q`	`D`	`P`	`R`	`E`	`R`	`G`	`R`	`L`	`L`	`S`	`K`	`L`	`A`	`D`	`E`	`L`	`E`	`S`	`Q`	`I`	`D`	`L`	`V`	`S`	`S`	`I`	`E`	`A`	`L`	`D`	`N`	`G`	`K`	`T`	`L`	`A`	`L`	`A`	`-`	`R`	`G`	`D`	`V`	`T`	`I`	`A`	`I`	`N`	`C`	`L`	`R`	`D`	`A`	136
		`+`			`W`				`+`		`R`	`+`	`R`	`G`	`R`	`L`	`L`		`+`	`L`	`A`	`D`		`+`	`E`				`+`		`+`	`+`	`+`	`I`	`E`	`A`	`L`	`D`		`G`					`L`	`A`		`+`			`V`		`+`	`+`	`I`				`R`
3RHJ_(C)	89	`N`	`G`	`L`	`W`	`G`	`K`	`I`	`N`	`A`	`R`	`D`	`R`	`G`	`R`	`L`	`L`	`Y`	`R`	`L`	`A`	`D`	`V`	`M`	`E`	`Q`	`H`	`Q`	`E`	`E`	`L`	`A`	`T`	`I`	`E`	`A`	`L`	`D`	`A`	`G`	`A`	`V`	`Y`	`T`	`L`	`A`	`L`	`K`	`T`	`H`	`V`	`G`	`M`	`S`	`I`	`Q`	`T`	`F`	`R`	`Y`	`F`	148

ALD6	137	`A`	`A`	`Y`	`A`	`D`	`K`	`V`	`N`	`G`	`R`	`T`	`I`	`N`	`T`	`G`	`D`	`G`	`Y`	`M`	`N`	`-`	`-`	`-`	`-`	`F`	`T`	`T`	`L`	`E`	`P`	`I`	`G`	`V`	`C`	`G`	`Q`	`I`	`I`	`P`	`W`	`N`	`F`	`P`	`I`	`M`	`M`	`L`	`A`	`W`	`K`	`I`	`A`	`P`	`A`	`L`	`A`	`M`	`G`	`N`	`V`	192
		`A`		`+`		`D`	`K`	`+`		`G`		`T`	`I`								`N`						`T`			`E`	`P`	`+`	`G`	`V`	`C`	`G`		`+`	`I`	`P`	`W`	`N`	`+`	`P`	`+`	`M`	`M`	`L`	`+`	`W`	`K`		`A`			`L`	`A`		`G`	`N`
3RHJ_(C)	149	`A`	`G`	`W`	`C`	`D`	`K`	`I`	`Q`	`G`	`A`	`T`	`I`	`P`	`I`	`N`	`Q`	`A`	`R`	`P`	`N`	`R`	`N`	`L`	`T`	`L`	`T`	`K`	`K`	`E`	`P`	`V`	`G`	`V`	`C`	`G`	`I`	`V`	`I`	`P`	`W`	`N`	`Y`	`P`	`L`	`M`	`M`	`L`	`S`	`W`	`K`	`T`	`A`	`A`	`C`	`L`	`A`	`A`	`G`	`N`	`T`	208

ALD6	193	`C`	`I`	`L`	`K`	`P`	`A`	`A`	`V`	`T`	`P`	`L`	`N`	`A`	`L`	`Y`	`F`	`A`	`S`	`L`	`C`	`K`	`K`	`V`	`G`	`I`	`P`	`A`	`G`	`V`	`V`	`N`	`I`	`V`	`P`	`G`	`P`	`G`	`R`	`T`	`V`	`G`	`A`	`A`	`L`	`T`	`N`	`D`	`P`	`R`	`I`	`R`	`K`	`L`	`A`	`F`	`T`	`G`	`S`	`T`	`E`	252
			`+`	`+`	`K`	`P`	`A`		`V`	`T`	`P`	`L`		`A`	`L`		`F`	`A`		`L`			`K`		`G`	`I`	`P`		`G`	`V`	`V`	`N`	`I`	`+`	`P`	`G`		`G`			`V`	`G`			`L`	`+`	`+`		`P`		`+`	`R`	`K`	`+`		`F`	`T`	`G`	`S`	`T`	`E`
3RHJ_(C)	209	`V`	`V`	`I`	`K`	`P`	`A`	`Q`	`V`	`T`	`P`	`L`	`T`	`A`	`L`	`K`	`F`	`A`	`E`	`L`	`T`	`L`	`K`	`A`	`G`	`I`	`P`	`K`	`G`	`V`	`V`	`N`	`I`	`L`	`P`	`G`	`S`	`G`	`S`	`L`	`V`	`G`	`Q`	`R`	`L`	`S`	`D`	`H`	`P`	`D`	`V`	`R`	`K`	`I`	`G`	`F`	`T`	`G`	`S`	`T`	`E`	268

ALD6	253	`V`	`G`	`K`	`S`	`V`	`A`	`V`	`D`	`S`	`S`	`E`	`S`	`N`	`L`	`K`	`K`	`I`	`T`	`L`	`E`	`L`	`G`	`G`	`K`	`S`	`A`	`H`	`L`	`V`	`F`	`D`	`D`	`A`	`N`	`I`	`K`	`K`	`T`	`L`	`P`	`N`	`L`	`V`	`N`	`G`	`I`	`F`	`K`	`N`	`A`	`G`	`Q`	`I`	`C`	`S`	`S`	`G`	`S`	`R`	`I`	312
		`V`	`G`	`K`		`+`					`+`		`S`	`N`	`+`	`K`	`K`	`+`	`+`	`L`		`L`	`G`	`G`	`K`	`S`			`+`	`+`	`F`		`D`		`+`	`+`		`K`		`+`				`+`	`+`		`+`	`F`		`N`		`G`	`+`		`C`		`+`			`R`	`+`
3RHJ_(C)	269	`V`	`G`	`K`	`H`	`I`	`M`	`K`	`S`	`C`	`A`	`L`	`S`	`N`	`V`	`K`	`K`	`V`	`S`	`L`	`A`	`L`	`G`	`G`	`K`	`S`	`P`	`L`	`I`	`I`	`F`	`A`	`D`	`C`	`D`	`L`	`N`	`K`	`A`	`V`	`Q`	`M`	`G`	`M`	`S`	`S`	`V`	`F`	`F`	`N`	`K`	`G`	`E`	`N`	`C`	`I`	`A`	`A`	`G`	`R`	`L`	328

ALD6	313	`Y`	`V`	`Q`	`E`	`G`	`I`	`Y`	`D`	`E`	`L`	`L`	`A`	`A`	`F`	`K`	`A`	`Y`	`L`	`E`	`T`	`E`	`I`	`K`	`V`	`G`	`N`	`P`	`F`	`D`	`K`	`A`	`N`	`F`	`Q`	`G`	`A`	`I`	`T`	`N`	`R`	`Q`	`Q`	`F`	`D`	`T`	`I`	`M`	`N`	`Y`	`I`	`D`	`I`	`G`	`K`	`K`	`E`	`G`	`A`	`K`	`I`	372
		`+`	`V`	`+`	`E`		`I`	`+`	`+`	`+`		`+`							`+`	`E`		`+`	`+`	`K`	`+`	`G`	`N`	`P`		`+`	`+`					`G`				`+`							`+`	`+`		`Y`				`G`		`K`	`E`	`G`	`A`		`+`
3RHJ_(C)	329	`F`	`V`	`E`	`E`	`S`	`I`	`H`	`N`	`Q`	`F`	`V`	`Q`	`K`	`V`	`V`	`E`	`E`	`V`	`E`	`-`	`K`	`M`	`K`	`I`	`G`	`N`	`P`	`L`	`E`	`R`	`D`	`T`	`N`	`H`	`G`	`P`	`Q`	`N`	`H`	`E`	`A`	`H`	`L`	`R`	`K`	`L`	`V`	`E`	`Y`	`C`	`Q`	`R`	`G`	`V`	`K`	`E`	`G`	`A`	`T`	`L`	387

ALD6	373	`L`	`T`	`G`	`G`	`E`	`K`	`V`	`G`	`D`	`K`	`G`	`Y`	`F`	`I`	`R`	`P`	`T`	`V`	`F`	`Y`	`D`	`V`	`N`	`E`	`D`	`M`	`R`	`I`	`V`	`K`	`E`	`E`	`I`	`F`	`G`	`P`	`V`	`V`	`T`	`V`	`A`	`K`	`F`	`K`	`T`	`-`	`-`	`L`	`E`	`E`	`G`	`V`	`E`	`M`	`A`	`N`	`S`	`S`	`E`	`F`	430
		`+`		`G`	`G`		`+`	`V`				`G`	`+`	`F`		`+`	`P`	`T`	`V`	`F`		`D`	`V`		`+`		`M`		`I`		`K`	`E`	`E`		`F`	`G`	`P`	`+`	`+`		`+`	`+`	`+`	`F`					`+`	`+`			`+`			`A`	`N`	`+`	`+`	`E`	`F`
3RHJ_(C)	388	`V`	`C`	`G`	`G`	`N`	`Q`	`V`	`P`	`R`	`P`	`G`	`F`	`F`	`F`	`Q`	`P`	`T`	`V`	`F`	`T`	`D`	`V`	`E`	`D`	`H`	`M`	`Y`	`I`	`A`	`K`	`E`	`E`	`S`	`F`	`G`	`P`	`I`	`M`	`I`	`I`	`S`	`R`	`F`	`A`	`D`	`G`	`D`	`V`	`D`	`A`	`V`	`L`	`S`	`R`	`A`	`N`	`A`	`T`	`E`	`F`	447

ALD6	431	`G`	`L`	`G`	`S`	`G`	`I`	`E`	`T`	`E`	`S`	`L`	`S`	`T`	`G`	`L`	`K`	`V`	`A`	`K`	`M`	`L`	`K`	`A`	`G`	`T`	`V`	`W`	`I`	`N`	`T`	`Y`	`N`	`D`	`F`	`D`	`S`	`R`	`V`	`P`	`F`	`G`	`G`	`V`	`K`	`Q`	`S`	`G`	`Y`	`G`	`R`	`E`	`M`	`G`	`E`	`E`	`V`	`Y`	`H`	`A`	`Y`	490
		`G`	`L`		`S`	`G`	`+`		`T`			`+`	`+`			`L`		`V`	`+`			`L`	`+`	`A`	`G`	`T`	`V`	`+`	`I`	`N`	`T`	`Y`	`N`			`D`				`P`	`F`	`G`	`G`		`K`	`Q`	`S`	`G`	`+`	`G`	`+`	`+`	`+`	`G`	`E`				`+`		`Y`
3RHJ_(C)	448	`G`	`L`	`A`	`S`	`G`	`V`	`F`	`T`	`R`	`D`	`I`	`N`	`K`	`A`	`L`	`Y`	`V`	`S`	`D`	`K`	`L`	`Q`	`A`	`G`	`T`	`V`	`F`	`I`	`N`	`T`	`Y`	`N`	`K`	`T`	`D`	`V`	`A`	`A`	`P`	`F`	`G`	`G`	`F`	`K`	`Q`	`S`	`G`	`F`	`G`	`K`	`D`	`L`	`G`	`E`	`A`	`A`	`L`	`N`	`E`	`Y`	507

ALD6	491	`T`	`E`	`V`	`K`	`A`	`V`																																																							496
				`+`	`K`		`V`
3RHJ_(C)	508	`L`	`R`	`I`	`K`	`T`	`V`																																																							513

Homolog Structure

Information provided by The RCSB Protein Databank (PDB)		Jump to alignment
PDB protein	3RHJ (Chain C) Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp
	PDB_Info
Homolog Source	Rattus norvegicus
External Links	SCOP MMDB CATH

Last updated on 2013-03-12