Alignment of YML133W-A and PDB 3BOG (chain B) Help



This page compares a protein of known structure to the Saccharomyces cerevisiae protein YML133W-A. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.

Alignment of yeast gene YML133W-A and PDB protein 3BOG (chain B)Jump to
Structure
Alignment Details
YML133W-A length = 192 aaAlignment Length = 70 aa (36.5%)P-value = 0.001300%Identity = 36%Similar = 8
Alignment Position

Sequence Alignment

YML133W-A

21

GTFSGSGISAGVGASSGSGISAGVGASSGSSTSVGVGTFGGSSTSVGVGTFGGSSTSVGV

80






GT +G G G G G G G + + GVG GG+S GVG GG G


3BOG_(B)

15

GTAGAAGSVGGPGCDGGHG---GNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKG---GS

68

YML133W-A

81

GTFSGSRTSP

90






GT G+ +P


3BOG_(B)

69

GTPKGADGAP

78

Homolog Structure
Information provided by The RCSB Protein Databank (PDB)Jump to
alignment
PDB protein3BOG (Chain B)
Snow Flea Antifreeze Protein Quasi-Racemate
  • PDB_Info
  • Homolog Sourcesynthetic construct
    External LinksSCOP
    MMDB
    CATH

    Last updated on 2014-12-05