Alignment of YAR061W and PDB 2XJU (chain A)

This page compares a protein of known structure to the Saccharomyces cerevisiae protein YAR061W. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.

Alignment of yeast gene YAR061W and PDB protein 2XJU (chain A)	Jump to Structure

Alignment Details

YAR061W length = 68 aa

Alignment Length = 45 aa (66.2%)

P-value = 1.0e-12

%Identity = 67

%Similar = 15

Alignment Position

Sequence Alignment

YAR061W	20	`V`	`S`	`G`	`S`	`T`	`Q`	`A`	`C`	`L`	`P`	`V`	`G`	`P`	`R`	`K`	`N`	`G`	`M`	`N`	`V`	`N`	`F`	`Y`	`K`	`Y`	`S`	`L`	`L`	`D`	`S`	`T`	`T`	`Y`	`S`	`Y`	`P`	`Q`	`Y`	`M`	`T`	`S`	`G`	`Y`	`A`	`S`	64
		`+`	`S`	`G`	`+`	`T`	`+`	`A`	`C`	`L`	`P`		`G`		`R`	`K`	`+`	`G`	`M`	`N`	`+`	`N`	`F`	`Y`	`+`	`Y`	`S`	`L`		`D`	`S`	`+`	`T`	`Y`	`S`				`Y`	`M`			`G`	`Y`	`A`	`S`
2XJU_(A)	9	`M`	`S`	`G`	`A`	`T`	`E`	`A`	`C`	`L`	`P`	`A`	`G`	`Q`	`R`	`K`	`S`	`G`	`M`	`N`	`I`	`N`	`F`	`Y`	`Q`	`Y`	`S`	`L`	`K`	`D`	`S`	`S`	`T`	`Y`	`S`	`N`	`A`	`A`	`Y`	`M`	`A`	`Y`	`G`	`Y`	`A`	`S`	53

Homolog Structure

Information provided by The RCSB Protein Databank (PDB)		Jump to alignment
PDB protein	2XJU (Chain A) X-Ray Structure Of The N-Terminal Domain Of The Flocculin Flo5 From Saccharomyces Cerevisiae With Mutation S227a In Complex With Calcium And A1,2-Mannobiose
	PDB_Info
Homolog Source	Saccharomyces cerevisiae S288c
External Links	SCOP MMDB CATH

Last updated on 2013-03-12