PDB Homolog: YLR410W-B

This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein YLR410W-B. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.
Last updated on 2013-03-12 42 PDB homolog(s) found for yeast gene YLR410W-B	YLR410W-B links Locus Info

This page presents information for the proteins of known structure with sequence similarity to the Saccharomyces cerevisiae protein YLR410W-B. The analysis was performed by comparing yeast protein sequences against protein sequences in The RCSB Protein Databank (PDB) using WU-BLAST.

Last updated on 2013-03-12
42 PDB homolog(s) found for yeast gene YLR410W-B
YLR410W-B links
Locus Info

PDB protein structure(s) homologous to YLR410W-B		Homolog Source (per PDB)	Protein Alignment: YLR410W-B vs. Homolog				External Links
PDB protein structure(s) homologous to YLR410W-B		Homolog Source (per PDB)	P-Value	%Identical	%Similar	Alignment	External Links
3OYK ( Chain: A, B) Crystal Structure Of The Pfv S217h Mutant Intasome Bound To Manganese	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-06	28	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-06	28	13	View alignment	SCOP MMDB CATH
3OYL ( Chain: A, B) Crystal Structure Of The Pfv S217h Mutant Intasome Bound To Magnesium And The Insti Mk2048	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-06	28	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-06	28	13	View alignment	SCOP MMDB CATH
3S3N ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) S217h Mutant Intasome In Complex With Magnesium And Dolutegravir (SGSK1349572)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-06	28	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-06	28	13	View alignment	SCOP MMDB CATH
3OYI ( Chain: A, B) Crystal Structure Of The Pfv S217q Mutant Intasome In Complex With Manganese	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 1.7e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 1.7e-05	27	13	View alignment	SCOP MMDB CATH
3OYJ ( Chain: A, B) Crystal Structure Of The Pfv S217q Mutant Intasome In Complex With Magnesium And The Insti Mk2048	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 1.7e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 1.7e-05	27	13	View alignment	SCOP MMDB CATH
3L2Q ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Apo Form	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3L2R ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3L2U ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And Gs9137 (Elvitegravir)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3L2V ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Manganese And Mk0518 (Raltegravir)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3L2W ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Manganese And Gs9137 (Elvitegravir)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OY9 ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Manganese At 2.55 Resolution	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OYA ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And Raltegravir At 2.65 Resolution	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OS0 ( Chain: A, B) Pfv Strand Transfer Complex (Stc) At 2.81 A Resolution	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OS1 ( Chain: A, B) Pfv Target Capture Complex (Tcc) At 2.97 A Resolution	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OS2 ( Chain: A, B) Pfv Target Capture Complex (Tcc) At 3.32 A Resolution	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OYB ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And The Insti Mk2048	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OYC ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And The Insti Pica	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OYD ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And The Insti Gs9160	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OYE ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And The Insti Compound2	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OYF ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And The Insti L-870,810	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OYG ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And The Insti Compound1 (Compoundg)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3OYH ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And The Insti Mk0536	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3S3M ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) Intasome In Complex With Magnesium And Dolutegravir (SGSK1349572)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4E7H ( Chain: A, B) Pfv Intasome Prior To 3'-Processing, Apo Form (Ui-Apo)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4E7I ( Chain: A, B) Pfv Intasome Freeze-Trapped Prior To 3'-Processing, Mn-Bound Form (Ui- Mn)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4E7J ( Chain: A, B) Pfv Integrase Target Capture Complex, Apo Form (Tcc-Apo), At 3.15 A Resolution	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4E7K ( Chain: A, B) Pfv Integrase Target Capture Complex (Tcc-Mn), Freeze-Trapped Prior To Strand Transfer, At 3.0 A Resolution	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4E7L ( Chain: A, B) Pfv Integrase Strand Transfer Complex (Stc-Mn) Following Reaction In Crystallo, At 3.0 A Resolution.	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BDY ( Chain: A, B) Pfv Intasome With Inhibitor Xz-89	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BDY ( Chain: A, B) Pfv Intasome With Inhibitor Xz-89	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BDZ ( Chain: A, B) Pfv Intasome With Inhibitor Xz-90	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BDZ ( Chain: A, B) Pfv Intasome With Inhibitor Xz-90	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BE0 ( Chain: A, B) Pfv Intasome With Inhibitor Xz-115	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BE0 ( Chain: A, B) Pfv Intasome With Inhibitor Xz-115	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BE1 ( Chain: A, B) Pfv Intasome With Inhibitor Xz-116	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BE1 ( Chain: A, B) Pfv Intasome With Inhibitor Xz-116	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BE2 ( Chain: A, B) Pfv Intasome With Inhibitor Xz-259	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
4BE2 ( Chain: A, B) Pfv Intasome With Inhibitor Xz-259	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 2.2e-05	27	13	View alignment	SCOP MMDB CATH
3S3O ( Chain: A, B) Crystal Structure Of The Prototype Foamy Virus (Pfv) N224h Mutant Intasome In Complex With Magnesium And Dolutegravir (SGSK1349572)	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 7.7e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 7.7e-05	27	13	View alignment	SCOP MMDB CATH
3OYN ( Chain: B, A) Crystal Structure Of The Pfv N224h Mutant Intasome Bound To Magnesium And The Insti Mk2048	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 7.7e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 7.7e-05	27	13	View alignment	SCOP MMDB CATH
3OYM ( Chain: B, A) Crystal Structure Of The Pfv N224h Mutant Intasome Bound To Manganese	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 7.7e-05	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 7.7e-05	27	13	View alignment	SCOP MMDB CATH
3DLR ( Chain: A) Crystal Structure Of The Catalytic Core Domain From Pfv Integrase	PDB_Info PDB_Structure	Human spumaretrovirus	0.000120	28	12	View alignment	SCOP MMDB CATH
4BAC ( Chain: A, B) Prototype Foamy Virus Strand Transfer Complexes On Product Dna	PDB_Info PDB_Structure	Human spumaretrovirus	Chain A = 0.000129	27	13	View alignment	SCOP MMDB CATH
	PDB_Info PDB_Structure	Human spumaretrovirus	Chain B = 0.000129	27	13	View alignment	SCOP MMDB CATH
2X6N ( Chain: E, D, C, B, A, F) Human Foamy Virus Integrase - Catalytic Core. Manganese- Bound Structure.	PDB_Info PDB_Structure	Human spumaretrovirus	Chain E = 0.001100	27	12	View alignment	SCOP MMDB CATH
			Chain D = 0.001100	27	12	View alignment
			Chain C = 0.001100	27	12	View alignment
			Chain B = 0.001100	27	12	View alignment
			Chain A = 0.001100	27	12	View alignment
			Chain F = 0.001100	27	12	View alignment
2X6S ( Chain: F, E, D, C, B, A) Human Foamy Virus Integrase - Catalytic Core. Magnesium- Bound Structure	PDB_Info PDB_Structure	Human spumaretrovirus	Chain F = 0.001100	27	12	View alignment	SCOP MMDB CATH
			Chain E = 0.001100	27	12	View alignment
			Chain D = 0.001100	27	12	View alignment
			Chain C = 0.001100	27	12	View alignment
			Chain B = 0.001100	27	12	View alignment
			Chain A = 0.001100	27	12	View alignment
2X78 ( Chain: C, A, B) Human Foamy Virus Integrase - Catalytic Core	PDB_Info PDB_Structure	Human spumaretrovirus	Chain C = 0.001400	27	12	View alignment	SCOP MMDB CATH
			Chain A = 0.001400	27	12	View alignment
			Chain B = 0.001400	27	12	View alignment
2X74 ( Chain: D, C, E, B, A, F) Human Foamy Virus Integrase - Catalytic Core.	PDB_Info PDB_Structure	Human spumaretrovirus	Chain D = 0.001799	27	12	View alignment	SCOP MMDB CATH
			Chain C = 0.001799	27	12	View alignment
			Chain E = 0.001799	27	12	View alignment
			Chain B = 0.001799	27	12	View alignment
			Chain A = 0.001799	27	12	View alignment
			Chain F = 0.001799	27	12	View alignment

Last updated on 2013-03-12