FLP1/R0010W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Flp1p domain/motif information see the external links section.

Proteome Browser

Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

Click on image for expanded interactive view

Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Flp1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Flp1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Flp1p
Protein	Motifs in common with Flp1p	Other motifs in this protein (but not in Flp1p )
Top1p	SUPERFAMILY SSF56349: DNA breaking-rejoining enzymes	Gene3D G3DSA:2.170.11.10: no description Gene3D G3DSA:1.10.10.41: no description Gene3D G3DSA:3.90.15.10: no description Gene3D G3DSA:1.10.132.10: no description SUPERFAMILY SSF56741: Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment Pfam PF02919: Topoisom_I_N Pfam PF01028: Topoisom_I Pfam PF14370: Topo_C_assoc SMART SM00435: DNA Topoisomerase I (eukaryota) PRINTS PR00416: EUTPISMRASEI PANTHER PTHR10290:SF0: DNA TOPOISOMERASE I, MITOCHONDRIAL PANTHER PTHR10290: DNA TOPOISOMERASE I, MITOCHONDRIAL

Unique domains/motifs

Jump to: top | Shared domains | Transmembrane domains | Signal peptide(s)

This table lists domains/motifs that are unique to Flp1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Flp1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Flp1p
Database source	Accession number	Description
Gene3D	G3DSA:1.10.443.10	no description
Gene3D	G3DSA:3.30.300.80	no description
Pfam	PF03930	Flp_N
Pfam	PF05202	Flp_C
SUPERFAMILY	SSF47823	lambda integrase-like, N-terminal domain

Transmembrane Domains

Jump to: top | Shared domains | Unique domains | Signal peptide(s)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Flp1p .

Signal Peptide(s)

Jump to: top | Shared domains | Unique domains | Transmembrane domains

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Flp1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Flp1p .