YML133W-A Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Yml133w-ap domain/motif information see the external links section.


Click on image for expanded interactive view
pbrowse

Shared domains/motifs


This table lists proteins that share domains/motifs in common with those found in Yml133w-ap , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Yml133w-ap domain/motif information see the external links section.

Last updated on 2013-12-16

There are no shared domains/motifs predicted for Yml133w-ap .

Unique domains/motifs


This table lists domains/motifs that are unique to Yml133w-ap . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Yml133w-ap domain/motif information see the external links section.

Last updated on 2013-12-16

There are no unique domains/motifs predicted for Yml133w-ap .

Transmembrane Domains


This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view) Amino Acid Coordinate(s)
pbrowse
4 - 26
168 - 187

Signal Peptide(s)


This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view) Amino Acid Coordinate(s)
pbrowse
1 - 17


The following external links can be used to directly search external databases for domain/motif information for Yml133w-ap .