SEC23/YPR181C Domains/Motifs and Signal Peptides 
To directly search external databases for Sec23p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Sec23p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Sec23p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Sec23p | ||
|---|---|---|
| Protein | Motifs in common with Sec23p | Other motifs in this protein (but not in Sec23p ) |
| Ybr012w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
| Abp1p | Gene3D G3DSA:3.40.20.10: no description |
PRINTS PR00452: SH3DOMAIN PRINTS PR00499: P67PHOX Gene3D G3DSA:2.30.30.40: no description SUPERFAMILY SSF55753: Actin depolymerizing proteins SUPERFAMILY SSF50044: SH3-domain SMART SM00102: Actin depolymerisation factor/cofilin -like SMART SM00326: Src homology PANTHER PTHR10829:SF2: DREBRIN-RELATED PANTHER PTHR10829: CORTACTIN AND DREBRIN Pfam PF00241: Cofilin_ADF Pfam PF00018: SH3_1 |
| Aim7p | Gene3D G3DSA:3.40.20.10: no description |
SMART SM00102: Actin depolymerisation factor/cofilin -like Pfam PF00241: Cofilin_ADF SUPERFAMILY SSF55753: Actin depolymerizing proteins PIR superfamily PIRSF001788: Glia maturation factor beta PANTHER PTHR11249:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11249: GLIAL FACTOR NATURATION FACTOR |
| Ydr098c-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve |
| Ydr210c-dp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Gene3D G3DSA:3.30.420.10: no description |
| Ydr261c-dp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Ydr316w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Ydr365w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve |
| Yer138cp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Gene3D G3DSA:3.30.420.10: no description |
| Yer160cp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Gene3D G3DSA:3.30.420.10: no description |
| Ygr027w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Gene3D G3DSA:3.30.420.10: no description PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Ygr038c-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve |
| Twf1p | Gene3D G3DSA:3.40.20.10: no description |
Pfam PF00241: Cofilin_ADF PANTHER PTHR13759:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13759: TWINFILIN SMART SM00102: Actin depolymerisation factor/cofilin -like SUPERFAMILY SSF55753: Actin depolymerizing proteins |
| Ygr161c-dp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Yhr035wp | SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 Pfam PF04811: Sec23_trunk PANTHER PTHR11141: PROTEIN TRANSPORT PROTEIN SEC23 Gene3D G3DSA:3.40.50.410: no description Gene3D G3DSA:3.40.20.10: no description |
none |
| Sfb3p | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 SUPERFAMILY SSF82919: Zn-finger domain of Sec23/24 SUPERFAMILY SSF81811: Helical domain of Sec23/24 Gene3D G3DSA:2.60.40.1670: no description Gene3D G3DSA:3.40.50.410: no description Gene3D G3DSA:3.40.20.10: no description Pfam PF04811: Sec23_trunk Pfam PF04815: Sec23_helical Pfam PF08033: Sec23_BS Pfam PF04810: zf-Sec23_Sec24 Pfam PF00626: Gelsolin |
PANTHER PTHR13803:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13803: SEC24-RELATED PROTEIN |
| Rpn10p | SUPERFAMILY SSF53300: vWA-like Gene3D G3DSA:3.40.50.410: no description |
PANTHER PTHR10223:SF0: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 PANTHER PTHR10223: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 Pfam PF13519: VWA_2 |
| Yhr214c-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Sec24p | Pfam PF04811: Sec23_trunk Pfam PF04815: Sec23_helical Pfam PF04810: zf-Sec23_Sec24 Pfam PF08033: Sec23_BS Pfam PF00626: Gelsolin SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 SUPERFAMILY SSF81811: Helical domain of Sec23/24 SUPERFAMILY SSF82919: Zn-finger domain of Sec23/24 Gene3D G3DSA:3.40.50.410: no description Gene3D G3DSA:3.40.20.10: no description |
PANTHER PTHR13803:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13803: SEC24-RELATED PROTEIN |
| Yjr027wp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve Gene3D G3DSA:3.30.420.10: no description PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
| Yjr029wp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Gene3D G3DSA:3.30.420.10: no description PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Cof1p | Gene3D G3DSA:3.40.20.10: no description |
SMART SM00102: Actin depolymerisation factor/cofilin -like SUPERFAMILY SSF55753: Actin depolymerizing proteins PANTHER PTHR11913: COFILIN-RELATED Pfam PF00241: Cofilin_ADF |
| Ssl1p | SUPERFAMILY SSF53300: vWA-like |
SMART SM00327: von Willebrand factor (vWF) type A domain SMART SM01047: TFIIH C1-like domain PANTHER PTHR12695:SF2: GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 PANTHER PTHR12695: GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 TIGRFAMs TIGR00622: ssl1: transcription factor ssl1 Pfam PF04056: Ssl1 Pfam PF07975: C1_4 PIR superfamily PIRSF015919: TFIIH basal transcription factor complex, SSL1 subunit SUPERFAMILY SSF57889: Cysteine-rich domain Gene3D G3DSA:3.10.370.10: no description |
| Mdn1p | SUPERFAMILY SSF53300: vWA-like |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SMART SM00382: ATPases associated with a variety of cellula PIR superfamily PIRSF010340: Midasin PANTHER PTHR22908:SF14: MIDASIN (MIDAS-CONTAINING PROTEIN) PANTHER PTHR22908: MIDASIN-RELATED Pfam PF07728: AAA_5 Gene3D G3DSA:3.40.50.300: no description |
| Ylr157c-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
| Ylr227w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
| Yml039wp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve Gene3D G3DSA:3.30.420.10: no description PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
| Yml045wp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Gene3D G3DSA:3.30.420.10: no description Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve |
| Ymr050cp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Yku80p | Gene3D G3DSA:3.40.50.410: no description SUPERFAMILY SSF53300: vWA-like |
Gene3D G3DSA:2.40.290.10: no description SMART SM00559: Ku70 and Ku80 are 70kDa and 80kDa subunits o SUPERFAMILY SSF100939: SPOC domain-like PANTHER PTHR12604:SF3: KU P80 DNA HELICASE PANTHER PTHR12604: KU AUTOANTIGEN DNA HELICASE Pfam PF03731: Ku_N Pfam PF02735: Ku Pfam PF03730: Ku_C |
| Yku70p | SUPERFAMILY SSF53300: vWA-like Gene3D G3DSA:3.40.50.410: no description |
SMART SM00559: Ku70 and Ku80 are 70kDa and 80kDa subunits o PIR superfamily PIRSF003033: Ku DNA-binding complex, Ku70 subunit SUPERFAMILY SSF100939: SPOC domain-like Pfam PF03731: Ku_N Pfam PF02735: Ku Pfam PF03730: Ku_C PANTHER PTHR12604:SF2: KU P70 DNA HELICASE PANTHER PTHR12604: KU AUTOANTIGEN DNA HELICASE Gene3D G3DSA:2.40.290.10: no description Gene3D G3DSA:1.10.1600.10: no description |
| Sfb2p | Pfam PF04811: Sec23_trunk Pfam PF04815: Sec23_helical Pfam PF08033: Sec23_BS Pfam PF04810: zf-Sec23_Sec24 Pfam PF00626: Gelsolin Gene3D G3DSA:2.60.40.1670: no description Gene3D G3DSA:3.40.50.410: no description Gene3D G3DSA:3.40.20.10: no description SUPERFAMILY SSF53300: vWA-like SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 SUPERFAMILY SSF82754: C-terminal, gelsolin-like domain of Sec23/24 SUPERFAMILY SSF81811: Helical domain of Sec23/24 SUPERFAMILY SSF82919: Zn-finger domain of Sec23/24 |
PANTHER PTHR13803:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13803: SEC24-RELATED PROTEIN |
| Ynl054w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
| Ynl284c-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Gene3D G3DSA:3.30.420.10: no description |
| Yol103w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Gene3D G3DSA:3.30.420.10: no description Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve |
| Yor142w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Snf2p | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
SMART SM00951: no description SMART SM00487: DEAD-like helicases superfamily SMART SM00490: helicase superfamily c-terminal domain SMART SM00297: bromo domain Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:1.20.920.10: no description SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF47370: Bromodomain PANTHER PTHR10799:SF209: GLOBAL TRANSCRIPTION ACTIVATOR SNF2L2 (ATP-DEPENDENT HELICASE SMARCA2) PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Pfam PF00176: SNF2_N Pfam PF00271: Helicase_C Pfam PF00439: Bromodomain Pfam PF08880: QLQ PRINTS PR00503: BROMODOMAIN |
| Ypl257w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
| Ypr137c-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
| Ypr158c-dp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON |
| Ypr158w-bp | SUPERFAMILY SSF81995: beta-sandwich domain of Sec23/24 |
Pfam PF01021: TYA Pfam PF07727: RVT_2 Pfam PF00665: rve PANTHER PTHR11439: GAG-POL-RELATED RETROTRANSPOSON Gene3D G3DSA:3.30.420.10: no description SUPERFAMILY SSF53098: Ribonuclease H-like SUPERFAMILY SSF56672: DNA/RNA polymerases |
This table lists domains/motifs that are unique to Sec23p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Sec23p domain/motif information see the external links section.
Last updated on 2013-05-06
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Sec23p .
