URN1/YPR152C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Urn1p domain/motif information see the external links section.

Proteome Browser

Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

Click on image for expanded interactive view

Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Urn1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Urn1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Urn1p
Protein	Motifs in common with Urn1p	Other motifs in this protein (but not in Urn1p )
Rsp5p	Gene3D G3DSA:2.20.70.10: no description SUPERFAMILY SSF51045: WW domain Pfam PF00397: WW SMART SM00456: Domain with 2 conserved Trp (W) residues	Gene3D G3DSA:2.60.40.150: no description Gene3D G3DSA:3.30.2160.10: no description SUPERFAMILY SSF56204: Hect, E3 ligase catalytic domain SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) PANTHER PTHR11254:SF81: E3 UBIQUITIN--PROTEIN LIGASE RSP5(YEAST)-RELATED PANTHER PTHR11254: HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Pfam PF00632: HECT Pfam PF00168: C2 SMART SM00239: Protein kinase C conserved region SMART SM00119: Domain Homologous to E6-AP Carboxyl Terminus
Wwm1p	SMART SM00456: Domain with 2 conserved Trp (W) residues Pfam PF00397: WW SUPERFAMILY SSF51045: WW domain Gene3D G3DSA:2.20.70.10: no description	none
Set2p	SUPERFAMILY SSF51045: WW domain SMART SM00456: Domain with 2 conserved Trp (W) residues	SUPERFAMILY SSF82199: SET domain Pfam PF08236: SRI Pfam PF00856: SET SMART SM00570: associated with SET domains SMART SM00317: SET (Su(var)3-9, Enhancer-of-zeste, Trithora SMART SM00508: Cysteine-rich motif following a subset of SE Gene3D G3DSA:2.170.270.10: no description PANTHER PTHR22884:SF36: HUNTINGTIN INTERACTING PROTEIN 1 PANTHER PTHR22884: SET DOMAIN PROTEINS
Ess1p	Gene3D G3DSA:2.20.70.10: no description SMART SM00456: Domain with 2 conserved Trp (W) residues SUPERFAMILY SSF51045: WW domain Pfam PF00397: WW	PANTHER PTHR10657:SF4: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 (ROTAMASE PIN1)(PPIASE PIN1) PANTHER PTHR10657: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Gene3D G3DSA:3.10.50.40: no description SUPERFAMILY SSF54534: FKBP-like Pfam PF00639: Rotamase
Prp40p	SUPERFAMILY SSF51045: WW domain SUPERFAMILY SSF81698: FF domain SMART SM00456: Domain with 2 conserved Trp (W) residues SMART SM00441: Contains two conserved F residues PANTHER PTHR11864: PRE-MRNA-PROCESSING PROTEIN PRP40 Pfam PF01846: FF Pfam PF00397: WW Gene3D G3DSA:2.20.70.10: no description Gene3D G3DSA:1.10.10.440: no description	none

Unique domains/motifs

Jump to: top | Shared domains | Transmembrane domains | Signal peptide(s)

This table lists domains/motifs that are unique to Urn1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Urn1p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Urn1p .

Transmembrane Domains

Jump to: top | Shared domains | Unique domains | Signal peptide(s)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Urn1p .

Signal Peptide(s)

Jump to: top | Shared domains | Unique domains | Transmembrane domains

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Urn1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Urn1p .