CTF4/YPR135W Domains/Motifs and Signal Peptides 
To directly search external databases for Ctf4p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Ctf4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ctf4p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Ctf4p | ||
|---|---|---|
| Protein | Motifs in common with Ctf4p | Other motifs in this protein (but not in Ctf4p ) |
| Vps8p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Gene3D G3DSA:3.30.40.10: no description PANTHER PTHR31202:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31202: FAMILY NOT NAMED SUPERFAMILY SSF57850: RING/U-box Pfam PF12816: Vps8 |
| Swd1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR12816:SF10: RETINOBLASTOMA BINDING PROTEIN 5-RELATED PANTHER PTHR12816: RETINOBLASTOMA BINDING PROTEIN 5 Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Hir1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR13831:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13831: MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS SMART SM00320: WD40 repeats Pfam PF00400: WD40 Pfam PF09453: HIRA_B Pfam PF07569: Hira |
| Sea4p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR16453:SF11: WD REPEAT-CONTAINING PROTEIN YBL104C PANTHER PTHR16453: WD40 DOMAIN-CONTAINING PROTEIN Gene3D G3DSA:3.30.40.10: no description |
| Sro77p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF08596: Lgl_C PANTHER PTHR10241:SF23: LETHAL GIANT LARVAE-RELATED PANTHER PTHR10241: LETHAL(2) GIANT LARVAE PROTEIN |
| Vps15p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR17583: PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 Pfam PF00069: Pkinase SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF48371: ARM repeat SMART SM00219: Tyrosine kinase, catalytic domain SMART SM00220: Serine/Threonine protein kinases, catalytic SMART SM00320: WD40 repeats Gene3D G3DSA:3.30.200.20: no description Gene3D G3DSA:1.10.510.10: no description Gene3D G3DSA:1.25.10.10: no description |
| Sif2p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR22846:SF1: GB DEF: SIR4-INTERACTING PROTEIN SIF2 PANTHER PTHR22846: WD40 REPEAT PROTEIN Pfam PF00400: WD40 Pfam PF08513: LisH SMART SM00667: Lissencephaly type-1-like homology motif SMART SM00320: WD40 repeats |
| Swd3p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 PANTHER PTHR22847:SF35: GB DEF: HYPOTHETICAL 34.8 KDA TRP-ASP REPEATS CONTAINING PROTEIN IN SMY2-RPS6B INTERGENI PANTHER PTHR22847: WD40 REPEAT PROTEIN SMART SM00320: WD40 repeats |
| Msi1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF00400: WD40 Pfam PF12265: CAF1C_H4-bd Pfam PF08662: eIF2A SMART SM00320: WD40 repeats PANTHER PTHR22850:SF30: SUBFAMILY NOT NAMED PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Taf5p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PRINTS PR00320: GPROTEINBRPT SMART SM00667: Lissencephaly type-1-like homology motif SMART SM00320: WD40 repeats Pfam PF00400: WD40 Pfam PF04494: TFIID_90kDa Pfam PF08513: LisH PANTHER PTHR19879:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19879: TRANSCRIPTION INITIATION FACTOR TFIID |
| Arc40p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PANTHER PTHR10709:SF2: ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1 PANTHER PTHR10709: ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1 PIR superfamily PIRSF038093: Actin-related protein 2/3 complex, subunit 1 Pfam PF00400: WD40 |
| Rrt2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR22850:SF17: RETINOBLASTOMA-BINDING PROTEIN-RELATED PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Dug2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PRINTS PR00320: GPROTEINBRPT SMART SM00320: WD40 repeats Gene3D G3DSA:3.40.630.10: no description Gene3D G3DSA:3.30.70.360: no description PANTHER PTHR11014:SF15: GLUTAMATE CARBOXYPEPTIDASE PANTHER PTHR11014: PEPTIDASE M20 FAMILY MEMBER PIR superfamily PIRSF037237: Metallopeptidase with WD repeats, DUG2 type Pfam PF01546: Peptidase_M20 Pfam PF07687: M20_dimer Pfam PF00400: WD40 SUPERFAMILY SSF53187: Zn-dependent exopeptidases |
| Gid7p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR22838: WD REPEAT PROTEIN 26-RELATED Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Bph1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM01026: Beige/BEACH domain Pfam PF02138: Beach Gene3D G3DSA:2.30.29.40: no description Gene3D G3DSA:1.10.1540.10: no description PANTHER PTHR13743: BEIGE/BEACH-RELATED SUPERFAMILY SSF81837: BEACH domain SUPERFAMILY SSF50729: PH domain-like |
| Pwp2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF00400: WD40 Pfam PF04003: Utp12 SUPERFAMILY SSF50998: Quinoprotein alcohol dehydrogenase-like SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT PANTHER PTHR19858: WD40 REPEAT PROTEIN |
| Sed4p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 PANTHER PTHR13729:SF1: GUANINE NUCLEOTIDE-EXCHANGE FACTOR SEC12 PANTHER PTHR13729: ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN) |
| Rsa4p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19848:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19848: WD40 REPEAT PROTEIN Pfam PF00400: WD40 Pfam PF08154: NLE PRINTS PR00320: GPROTEINBRPT SMART SM00320: WD40 repeats |
| Tup1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR22847:SF140: PREDICTED: SIMILAR TO WD REPEAT DOMAIN 27 PANTHER PTHR22847: WD40 REPEAT PROTEIN Pfam PF00400: WD40 Pfam PF08581: Tup_N SMART SM00320: WD40 repeats ProDom PD010558: TUP1_YEAST_P16649; PRINTS PR00320: GPROTEINBRPT |
| Cop1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PIR superfamily PIRSF003354: Coatomer, alpha subunit Pfam PF04053: Coatomer_WDAD Pfam PF06957: COPI_C Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR19876:SF1: COATOMER ALPHA SUBUNIT PANTHER PTHR19876: COATOMER PRINTS PR00320: GPROTEINBRPT |
| Cmr1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR14773:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14773: UNCHARACTERIZED Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Sec31p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF11549: Sec31 Pfam PF00400: WD40 Pfam PF07304: SRA1 SMART SM00320: WD40 repeats PANTHER PTHR13923:SF4: WEB1 PANTHER PTHR13923: SEC31-RELATED PROTEIN |
| Rad28p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PRINTS PR00320: GPROTEINBRPT Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR22850:SF31: SUBFAMILY NOT NAMED PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Vps41p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats SMART SM00299: Clathrin heavy chain repeat homology Gene3D G3DSA:1.25.40.10: no description PANTHER PTHR12616:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12616: VACUOLAR PROTEIN SORTING VPS41 Pfam PF00637: Clathrin Pfam PF00400: WD40 PIR superfamily PIRSF028921: Vacuolar protein sorting-associated protein Vps41 |
| Mtc5p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats SMART SM00591: no description PANTHER PTHR22850:SF8: SUBFAMILY NOT NAMED PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Pex7p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR22850:SF4: PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR PANTHER PTHR22850: WD40 REPEAT FAMILY PRINTS PR00320: GPROTEINBRPT SMART SM00320: WD40 repeats Pfam PF00400: WD40 |
| Trm82p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR16288:SF0: SUBFAMILY NOT NAMED PANTHER PTHR16288: WD40 REPEAT PROTEIN 4 |
| Cia1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT PANTHER PTHR19920:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19920: WD40 PROTEIN CIAO1 Pfam PF00400: WD40 |
| Utp4p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR22844:SF21: PREDICTED: HYPOTHETICAL PROTEIN PANTHER PTHR22844: F-BOX AND WD40 DOMAIN PROTEIN |
| Tfc6p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
none |
| Cdc40p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19852:SF3: GB DEF: PRE-MRNA SPLICING FACTOR PRP17 (CELL DIVISION CONTROL PROTEIN 40) PANTHER PTHR19852: FAMILY NOT NAMED Pfam PF00400: WD40 SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT |
| Utp5p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF04003: Utp12 PANTHER PTHR26208:SF22: SUBFAMILY NOT NAMED PANTHER PTHR26208: FAMILY NOT NAMED |
| Pac11p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 |
| Yel025cp | SUPERFAMILY SSF50978: WD40 repeat-like |
none |
| Hat2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF12265: CAF1C_H4-bd Pfam PF00400: WD40 PANTHER PTHR22850:SF20: GB DEF: HISTONE ACETYLTRANSFERASE TYPE B SUBUNIT 2 (EC 2.3.1.48) PANTHER PTHR22850: WD40 REPEAT FAMILY SMART SM00320: WD40 repeats |
| Rrt13p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT Pfam PF00400: WD40 PANTHER PTHR22844:SF12: CELL DIVISION CONTROL PROTEIN 4 PANTHER PTHR22844: F-BOX AND WD40 DOMAIN PROTEIN |
| Utp7p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats SMART SM01033: BING4CT (NUC141) domain ProDom PD023243: UTP7_YEAST_P40055; PANTHER PTHR14085:SF3: SUBFAMILY NOT NAMED PANTHER PTHR14085: WD-REPEAT PROTEIN BING4 Pfam PF08149: BING4CT Pfam PF00400: WD40 |
| Gle2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 PANTHER PTHR10971:SF11: MRNA EXPORT FACTOR PANTHER PTHR10971: MRNA EXPORT FACTOR AND BUB3 PRINTS PR00320: GPROTEINBRPT |
| Dse1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats |
| Cdc4p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF81383: F-box domain Pfam PF00400: WD40 Pfam PF12937: F-box-like Gene3D G3DSA:1.20.1280.50: no description PANTHER PTHR22844:SF12: CELL DIVISION CONTROL PROTEIN 4 PANTHER PTHR22844: F-BOX AND WD40 DOMAIN PROTEIN SMART SM00256: A Receptor for Ubiquitination Targets SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT |
| Atg18p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR11227:SF17: WIPI-1,2 PANTHER PTHR11227: WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES (WIPI)-RELATED |
| Ptr3p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
none |
| Cdh1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19918:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19918: CELL DIVISION CYCLE 20 (CDC20) (FIZZY)-RELATED Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Rpn14p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR19852:SF5: PRE-MRNA SPLICING FACTOR PRP17 PANTHER PTHR19852: FAMILY NOT NAMED Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Pan2p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF54001: Cysteine proteinases SUPERFAMILY SSF53098: Ribonuclease H-like Gene3D G3DSA:3.30.420.10: no description Pfam PF13423: UCH_1 Pfam PF00929: RNase_T SMART SM00479: no description PANTHER PTHR15728:SF0: SUBFAMILY NOT NAMED PANTHER PTHR15728: UBIQUITIN SPECIFIC PROTEASE 52 / POLY(A) RIBONUCLEASE SUBUNIT PAN2 |
| Seh1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR11024:SF3: NUCLEOPORIN SEH1 (SEC13-LIKE PROTEIN) PANTHER PTHR11024: PROTEIN TRANSPORT PROTEIN SEC13-RELATED Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Nsa1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR16038: NOP SEVEN ASSOCIATED PROTEIN 1 |
| Cdc20p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR19918:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19918: CELL DIVISION CYCLE 20 (CDC20) (FIZZY)-RELATED |
| Sec27p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PIR superfamily PIRSF005567: Coatomer, beta' subunit SMART SM00320: WD40 repeats SUPERFAMILY SSF82171: DPP6 N-terminal domain-like PRINTS PR00320: GPROTEINBRPT PANTHER PTHR19876:SF2: COATOMER BETA SUBUNIT PANTHER PTHR19876: COATOMER Pfam PF04053: Coatomer_WDAD Pfam PF00400: WD40 |
| Cdc55p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PRINTS PR00600: PP2APR55 Pfam PF00400: WD40 PANTHER PTHR11871: PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B PIR superfamily PIRSF037309: Serine/threonine-protein phosphatase 2A, subunit B55 SMART SM00320: WD40 repeats |
| Ski8p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 PANTHER PTHR22841:SF11: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR22841: FAMILY NOT NAMED |
| Ygr054wp | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PIR superfamily PIRSF017222: Translation initiation factor eIF-2A PANTHER PTHR13227:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13227: NUCLEASE-RELATED Pfam PF08662: eIF2A |
| Ygr117cp | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PIR superfamily PIRSF007778: Uncharacterised conserved protein, UCP007778 type Pfam PF08513: LisH SMART SM00667: Lissencephaly type-1-like homology motif |
| Enp2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR14927:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14927: UNCHARACTERIZED Pfam PF08159: NUC153 |
| Elp2p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF101908: Putative isomerase YbhE PANTHER PTHR13729:SF2: ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN) PANTHER PTHR13729: ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN) SMART SM00320: WD40 repeats Pfam PF00400: WD40 |
| Hsv2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PANTHER PTHR11227:SF18: WIPI-3,4 PANTHER PTHR11227: WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES (WIPI)-RELATED |
| Ama1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats PANTHER PTHR19918:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19918: CELL DIVISION CYCLE 20 (CDC20) (FIZZY)-RELATED Pfam PF00400: WD40 |
| Kog1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF48371: ARM repeat PRINTS PR01547: YEAST176DUF PANTHER PTHR12848:SF4: GB DEF: HYPOTHETICAL 175.8 KDA TRP-ASP REPEATS CONTAINING PROTEIN IN GND1-IKI1 INTERGENI PANTHER PTHR12848: FAMILY NOT NAMED Gene3D G3DSA:1.25.10.10: no description Pfam PF02985: HEAT |
| Utp9p | Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF69322: Tricorn protease domain 2 |
| Met30p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 Pfam PF12937: F-box-like SUPERFAMILY SSF81383: F-box domain SMART SM00256: A Receptor for Ubiquitination Targets SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT PANTHER PTHR22844:SF72: SUBFAMILY NOT NAMED PANTHER PTHR22844: F-BOX AND WD40 DOMAIN PROTEIN Gene3D G3DSA:1.20.1280.50: no description |
| Nup159p | Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF117289: Nucleoporin domain |
| Sqt1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 PANTHER PTHR19857:SF11: SUBFAMILY NOT NAMED PANTHER PTHR19857: FAMILY NOT NAMED SMART SM00320: WD40 repeats |
| Nup82p | Gene3D G3DSA:2.130.10.10: no description |
none |
| Utp18p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PANTHER PTHR18359: WD-REPEAT PROTEIN-RELATED Pfam PF00400: WD40 |
| Mdv1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR22844:SF73: WD REPEAT-CONTAINING PROTEIN 87 (TESTIS DEVELOPMENT PROTEIN NYD-SP11) SOURCE:UN PANTHER PTHR22844: F-BOX AND WD40 DOMAIN PROTEIN Pfam PF00400: WD40 Pfam PF11542: Mdv1 PRINTS PR00320: GPROTEINBRPT SMART SM00320: WD40 repeats |
| Rav1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF12234: Rav1p_C PANTHER PTHR13950:SF2: RABCONNECTIN-RELATED PANTHER PTHR13950: RABCONNECTIN-RELATED |
| Swd2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PANTHER PTHR19861:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19861: WD40 REPEAT PROTEIN SWD2 Pfam PF00400: WD40 |
| Mak11p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats PANTHER PTHR22847:SF173: SUBFAMILY NOT NAMED PANTHER PTHR22847: WD40 REPEAT PROTEIN PRINTS PR00320: GPROTEINBRPT Pfam PF00400: WD40 |
| Dgr2p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats PANTHER PTHR14221:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14221: WD REPEAT DOMAIN 44 Pfam PF00400: WD40 |
| Doa1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19849:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19849: PHOSPHOLIPASE A-2-ACTIVATING PROTEIN Pfam PF08324: PUL Pfam PF09070: PFU Pfam PF00400: WD40 SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT |
| Caf4p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PRINTS PR00320: GPROTEINBRPT Pfam PF11615: DUF3249 Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR22844:SF73: WD REPEAT-CONTAINING PROTEIN 87 (TESTIS DEVELOPMENT PROTEIN NYD-SP11) SOURCE:UN PANTHER PTHR22844: F-BOX AND WD40 DOMAIN PROTEIN |
| Nup133p | Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF117289: Nucleoporin domain Pfam PF03177: Nucleoporin_C Pfam PF08801: Nucleoporin_N PANTHER PTHR13405:SF3: GB DEF: NUCLEOPORIN NUP133 (NUCLEAR PORE PROTEIN NUP133) PANTHER PTHR13405: FAMILY NOT NAMED |
| Sof1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats PANTHER PTHR22851:SF0: SUBFAMILY NOT NAMED PANTHER PTHR22851: U3 SMALL NUCLEOLAR RNA (U3 SNORNA) ASSOCIATED PROTEIN PRINTS PR00320: GPROTEINBRPT Pfam PF00400: WD40 Pfam PF04158: Sof1 |
| Prp19p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR13889:SF1: PRE-MRNA SPLICING FACTOR PRP19, YEAST PANTHER PTHR13889: PRE-MRNA SPLICING FACTOR PRP19-RELATED Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box Pfam PF08606: Prp19 SMART SM00504: Modified RING finger domain |
| Spt8p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19852:SF11: SUBFAMILY NOT NAMED PANTHER PTHR19852: FAMILY NOT NAMED SMART SM00320: WD40 repeats Pfam PF00400: WD40 |
| Rax2p | SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF12768: Rax2 PANTHER PTHR31778:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31778: FAMILY NOT NAMED |
| Dip2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 Pfam PF04003: Utp12 PRINTS PR00320: GPROTEINBRPT SUPERFAMILY SSF117289: Nucleoporin domain PANTHER PTHR19853: WD REPEAT CONTAINING PROTEIN 3 (WDR3) |
| Ylr149cp | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF10313: DUF2415 |
| Pwp1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PANTHER PTHR14091: WD REPEAT PROTEIN Pfam PF00400: WD40 |
| Sec13p | Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF101908: Putative isomerase YbhE PANTHER PTHR11024: PROTEIN TRANSPORT PROTEIN SEC13-RELATED SMART SM00320: WD40 repeats Pfam PF00400: WD40 |
| Utp13p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PRINTS PR00320: GPROTEINBRPT PANTHER PTHR19854:SF12: WD40-REPEAT PROTEIN PANTHER PTHR19854: TRANSDUCIN BETA-LIKE 3 SMART SM00320: WD40 repeats Pfam PF00400: WD40 Pfam PF08625: Utp13 |
| Iki3p | Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR12747: IKAPPAB KINASE COMPLEX-ASSOCIATED PROTEIN PIR superfamily PIRSF017233: IkappaB kinase complex, IKAP component Pfam PF04762: IKI3 SUPERFAMILY SSF82171: DPP6 N-terminal domain-like |
| Utp21p | Gene3D G3DSA:2.130.10.10: no description |
Pfam PF04192: Utp21 Pfam PF00400: WD40 SMART SM00320: WD40 repeats SUPERFAMILY SSF50998: Quinoprotein alcohol dehydrogenase-like SUPERFAMILY SSF50969: YVTN repeat-like/Quinoprotein amine dehydrogenase PANTHER PTHR13889:SF2: WD-REPEAT PROTEIN 36 (T-CELL ACTIVATION WD REPEAT PROTEIN) PANTHER PTHR13889: PRE-MRNA SPLICING FACTOR PRP19-RELATED |
| Crn1p | Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT PANTHER PTHR10856:SF0: CORONIN-RELATED PANTHER PTHR10856: CORONIN SUPERFAMILY SSF101908: Putative isomerase YbhE Pfam PF08954: DUF1900 Pfam PF08953: DUF1899 Pfam PF00400: WD40 |
| Rse1p | SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF03178: CPSF_A PANTHER PTHR10644:SF1: SPLICING FACTOR 3B SUBUNIT 3 (SPLICEOSOME-ASSOCIATED PROTEIN 130)(SAP 130) PANTHER PTHR10644: DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| Ufo1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF81383: F-box domain Gene3D G3DSA:1.20.1280.50: no description Pfam PF12937: F-box-like PANTHER PTHR15340:SF10: UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN UFO1 PANTHER PTHR15340: UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN UFO1-RELATED SMART SM00256: A Receptor for Ubiquitination Targets SMART SM00726: Ubiquitin-interacting motif. |
| Cac2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 PANTHER PTHR15271:SF4: SUBFAMILY NOT NAMED PANTHER PTHR15271: CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B |
| Far8p | SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF08232: Striatin PANTHER PTHR15653:SF0: SUBFAMILY NOT NAMED PANTHER PTHR15653: STRIATIN |
| Erb1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF08145: BOP1NT Pfam PF00400: WD40 PANTHER PTHR17605: RIBOSOME BIOGENESIS PROTEIN BOP1 (BLOCK OF PROLIFERATION 1 PROTEIN) SMART SM01035: BOP1NT (NUC169) domain SMART SM00320: WD40 repeats |
| Aip1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19856: WD-REPEATCONTAINING PROTEIN (WDR1) SMART SM00320: WD40 repeats Pfam PF00400: WD40 |
| Utp15p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19924:SF6: GB DEF: U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 (U3 SNORNA-ASSOCIATED PROTEIN 15) PANTHER PTHR19924: FAMILY NOT NAMED Pfam PF09384: UTP15_C Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Ymr102cp | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PRINTS PR00320: GPROTEINBRPT SMART SM00320: WD40 repeats PANTHER PTHR14221:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14221: WD REPEAT DOMAIN 44 Pfam PF00400: WD40 |
| Asc1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19868:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19868: RECEPTOR FOR ACTIVATED PROTEIN KINASE C (RACK1) PRINTS PR00320: GPROTEINBRPT SMART SM00320: WD40 repeats Pfam PF00400: WD40 |
| Rrb1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 Pfam PF12265: CAF1C_H4-bd PANTHER PTHR22850:SF7: WD-40 REPEAT PROTEIN PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Tif34p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19877: WD40 REPEAT PROTEIN Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Pep5p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF57850: RING/U-box PANTHER PTHR23323:SF24: VACUOLAR MEMBRANE PROTEIN PEP5, 11 PANTHER PTHR23323: VACUOLAR MEMBRANE PROTEIN RELATED SMART SM00249: PHD zinc finger SMART SM00184: Ring finger Gene3D G3DSA:3.30.40.10: no description PIR superfamily PIRSF007860: Vacuolar protein sorting-associated protein 11 Pfam PF12451: VPS11_C |
| Lst8p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PRINTS PR00320: GPROTEINBRPT PANTHER PTHR19842:SF0: SUBFAMILY NOT NAMED PANTHER PTHR19842: G BETA-LIKE PROTEIN GBL Pfam PF00400: WD40 |
| Ynl035cp | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats PANTHER PTHR22889: UNCHARACTERIZED Pfam PF00400: WD40 |
| Ipi3p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR18763: WD-REPEAT PROTEIN 18 Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Swt21p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Gene3D G3DSA:2.140.10.10: no description |
| Vid27p | Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF50969: YVTN repeat-like/Quinoprotein amine dehydrogenase Pfam PF08553: VID27 PANTHER PTHR31913: FAMILY NOT NAMED |
| Tex1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 PANTHER PTHR22839:SF0: SUBFAMILY NOT NAMED PANTHER PTHR22839: THO COMPLEX SUBUNIT 3 (THO3) |
| Pfs2p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 PANTHER PTHR22836: WD40 REPEAT PROTEIN SMART SM00320: WD40 repeats |
| Sec12p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR13729:SF1: GUANINE NUCLEOTIDE-EXCHANGE FACTOR SEC12 PANTHER PTHR13729: ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN) |
| Duf1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR19862:SF9: UNCHARACTERIZED WD REPEAT-CONTAINING PROTEIN YOL087C PANTHER PTHR19862: FAMILY NOT NAMED Pfam PF11816: DUF3337 Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Rtc1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description Pfam PF00400: WD40 PANTHER PTHR22850:SF4: PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Bub3p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR10971:SF5: MITOTIC CHECKPOINT PROTEIN BUB3 PANTHER PTHR10971: MRNA EXPORT FACTOR AND BUB3 |
| Hir2p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF50960: TolB, C-terminal domain PANTHER PTHR13831:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13831: MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS Pfam PF07569: Hira |
| Ste4p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
PANTHER PTHR19850:SF1: GB DEF: GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT PANTHER PTHR19850: GUANINE NUCLEOTIDE-BINDING PROTEIN BETA (G PROTEIN BETA) PIR superfamily PIRSF002394: Guanine nucleotide-binding protein, beta subunit PRINTS PR00319: GPROTEINB PRINTS PR00320: GPROTEINBRPT Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Wtm2p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 PANTHER PTHR22850:SF47: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Wtm1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR22850:SF47: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Pac1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF00400: WD40 PANTHER PTHR22847:SF174: PREDICTED: SIMILAR TO TBL2 PROTEIN PANTHER PTHR22847: WD40 REPEAT PROTEIN PRINTS PR00320: GPROTEINBRPT SUPERFAMILY SSF109925: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain PIR superfamily PIRSF037647: Dynein regulator, Lis1 type SMART SM00320: WD40 repeats |
| Ytm1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 Pfam PF08154: NLE PANTHER PTHR19855:SF11: WD40 REPEAT PROTEIN 12 PANTHER PTHR19855: WD40 REPEAT PROTEIN 12, 37 PRINTS PR00320: GPROTEINBRPT |
| Tfc8p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF12660: zf-TFIIIC |
| Atg21p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00320: WD40 repeats PANTHER PTHR11227:SF3: WIPI-RELATED PANTHER PTHR11227: WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES (WIPI)-RELATED Pfam PF00400: WD40 |
| Nan1p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SUPERFAMILY SSF75011: 3-carboxy-cis,cis-mucoante lactonizing enzyme SMART SM00320: WD40 repeats PANTHER PTHR22847:SF231: WD-40 REPEAT PROTEIN PANTHER PTHR22847: WD40 REPEAT PROTEIN Pfam PF00400: WD40 |
| Ume1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF00400: WD40 PANTHER PTHR22850:SF47: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Prp46p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
PANTHER PTHR19923: WD40 REPEAT PROTEINPRL1/PRL2-RELATED PRINTS PR00320: GPROTEINBRPT Pfam PF00400: WD40 SMART SM00320: WD40 repeats |
| Rtt10p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
SMART SM00320: WD40 repeats Pfam PF00400: WD40 PANTHER PTHR14344:SF3: SUBFAMILY NOT NAMED PANTHER PTHR14344: WD REPEAT PROTEIN |
| Ypl247cp | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
Pfam PF00400: WD40 SMART SM00320: WD40 repeats PANTHER PTHR19919: WD REPEAT CONTAINING PROTEIN |
| Sro7p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF08596: Lgl_C PANTHER PTHR10241:SF23: LETHAL GIANT LARVAE-RELATED PANTHER PTHR10241: LETHAL(2) GIANT LARVAE PROTEIN |
| Asa1p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
none |
| Rrp9p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
Pfam PF00400: WD40 PANTHER PTHR19865: U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2 SMART SM00320: WD40 repeats |
| Jip5p | Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like |
none |
| Prp4p | SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
SMART SM00500: Splicing Factor Motif, present in Prp18 and SMART SM00320: WD40 repeats Pfam PF00400: WD40 PRINTS PR00320: GPROTEINBRPT PANTHER PTHR19846: WD40 REPEAT PROTEIN |
This table lists domains/motifs that are unique to Ctf4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Ctf4p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Ctf4p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR19932 | WD REPEAT AND HMG-BOX DNA BINDING PROTEIN |
| PANTHER | PTHR19932:SF1 | GB DEF: DNA POLYMERASE ALPHA-BINDING PROTEIN (CTF4 PROTEIN) (POB1 PROTEIN) (CHROMOSOME R |
| Pfam | PF12341 | DUF3639 |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Ctf4p .
