SUA7/YPR086W Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Sua7p domain/motif information see the external links section.


Click on image for expanded interactive view
pbrowse

Shared domains/motifs


This table lists proteins that share domains/motifs in common with those found in Sua7p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Sua7p domain/motif information see the external links section.

Last updated on 2013-12-16

Other Saccharomyces cerevisiae proteins that contain motifs found in Sua7p
Protein Motifs in common with Sua7p Other motifs in this protein (but not in Sua7p )
Cln3p SUPERFAMILY SSF47954: Cyclin-like
Gene3D G3DSA:1.10.472.10: no description
SMART SM00385: domain present in cyclins, TFIIB and Retinob
PANTHER PTHR10177:SF40: SUBFAMILY NOT NAMED
PANTHER PTHR10177: CYCLINE
Pfam PF00134: Cyclin_N
Rmd1p SUPERFAMILY SSF47954: Cyclin-like
PANTHER PTHR16255:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR16255: UNCHARACTERIZED
Pfam PF02582: DUF155
Pcl2p Gene3D G3DSA:1.10.472.10: no description
SUPERFAMILY SSF47954: Cyclin-like
SMART SM00385: domain present in cyclins, TFIIB and Retinob
Pfam PF00134: Cyclin_N
PIR superfamily PIRSF016511: Cyclin, fungal Pcl/HCS26 type
PANTHER PTHR31864:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR31864: FAMILY NOT NAMED
Clb3p SUPERFAMILY SSF47954: Cyclin-like
SMART SM00385: domain present in cyclins, TFIIB and Retinob
Gene3D G3DSA:1.10.472.10: no description
Pfam PF00134: Cyclin_N
Pfam PF02984: Cyclin_C
PIR superfamily PIRSF001771: Cyclin, A/B/D/E types
PANTHER PTHR10177:SF27: CYCLIN B
PANTHER PTHR10177: CYCLINE
Pcl9p SUPERFAMILY SSF47954: Cyclin-like
Gene3D G3DSA:1.10.472.10: no description
SMART SM00385: domain present in cyclins, TFIIB and Retinob
PIR superfamily PIRSF016511: Cyclin, fungal Pcl/HCS26 type
Pfam PF00134: Cyclin_N
PANTHER PTHR31864:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR31864: FAMILY NOT NAMED
Rpc11p Gene3D G3DSA:2.20.25.10: no description
SUPERFAMILY SSF57783: Zinc beta-ribbon
PANTHER PTHR11239:SF2: DNA-DIRECTED RNA POLYMERASE III
PANTHER PTHR11239: DNA-DIRECTED RNA POLYMERASE
SMART SM00661: RNA polymerase subunit
SMART SM00440: C2C2 Zinc finger
Pfam PF01096: TFIIS_C
Pfam PF02150: RNA_POL_M_15KD
Dst1p Gene3D G3DSA:2.20.25.10: no description
SUPERFAMILY SSF57783: Zinc beta-ribbon
Pfam PF07500: TFIIS_M
Pfam PF01096: TFIIS_C
Pfam PF08711: Med26
PANTHER PTHR11477: TRANSCRIPTION ELONGATION FACTOR S-II
SMART SM00509: Domain in the N-terminus of transcription el
SMART SM00510: Domain in the central regions of transcripti
SMART SM00440: C2C2 Zinc finger
Gene3D G3DSA:1.20.930.10: no description
Gene3D G3DSA:1.10.472.30: no description
PIR superfamily PIRSF006704: Transcription elongation factor, IIS type
TIGRFAMs TIGR01385: TFSII: transcription elongation factor S-II
SUPERFAMILY SSF46942: Elongation factor TFIIS domain 2
SUPERFAMILY SSF47676: Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
Rpb9p SUPERFAMILY SSF57783: Zinc beta-ribbon
Gene3D G3DSA:2.20.25.10: no description
SMART SM00661: RNA polymerase subunit
SMART SM00440: C2C2 Zinc finger
PANTHER PTHR11239:SF1: DNA-DIRECTED RNA POLYMERASE II
PANTHER PTHR11239: DNA-DIRECTED RNA POLYMERASE
Pfam PF02150: RNA_POL_M_15KD
Pfam PF01096: TFIIS_C
Snt2p SUPERFAMILY SSF57783: Zinc beta-ribbon
SUPERFAMILY SSF57903: FYVE/PHD zinc finger
SUPERFAMILY SSF46689: Homeodomain-like
Gene3D G3DSA:3.30.40.10: no description
Pfam PF01426: BAH
Pfam PF00628: PHD
Pfam PF13832: zf-HC5HC2H_2
PANTHER PTHR13793:SF12: PHD FINGER PROTEIN
PANTHER PTHR13793: PHD FINGER PROTEINS
SMART SM00439: Bromo adjacent homology domain
SMART SM00249: PHD zinc finger
SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin
Clb1p SMART SM00385: domain present in cyclins, TFIIB and Retinob
Gene3D G3DSA:1.10.472.10: no description
SUPERFAMILY SSF47954: Cyclin-like
PANTHER PTHR10177:SF27: CYCLIN B
PANTHER PTHR10177: CYCLINE
PIR superfamily PIRSF001771: Cyclin, A/B/D/E types
Pfam PF00134: Cyclin_N
Pfam PF02984: Cyclin_C
Clb6p SUPERFAMILY SSF47954: Cyclin-like
SMART SM00385: domain present in cyclins, TFIIB and Retinob
Gene3D G3DSA:1.10.472.10: no description
PIR superfamily PIRSF001771: Cyclin, A/B/D/E types
PANTHER PTHR10177:SF27: CYCLIN B
PANTHER PTHR10177: CYCLINE
Pfam PF00134: Cyclin_N
Pfam PF02984: Cyclin_C
Brf1p SMART SM00385: domain present in cyclins, TFIIB and Retinob
Pfam PF00382: TFIIB
Pfam PF08271: TF_Zn_Ribbon
PRINTS PR00685: TIFACTORIIB
SUPERFAMILY SSF47954: Cyclin-like
SUPERFAMILY SSF57783: Zinc beta-ribbon
Gene3D G3DSA:2.20.25.10: no description
Gene3D G3DSA:1.10.472.10: no description
PANTHER PTHR11618: TRANSCRIPTION INITIATION FACTOR IIB-RELATED
Pfam PF07741: BRF1
Gene3D G3DSA:1.20.5.650: no description
PANTHER PTHR11618:SF4: TRANSCRIPTION FACTOR IIIB
Pcl5p Gene3D G3DSA:1.10.472.10: no description
SUPERFAMILY SSF47954: Cyclin-like
Pfam PF08613: Cyclin
Ctk2p SMART SM00385: domain present in cyclins, TFIIB and Retinob
SUPERFAMILY SSF47954: Cyclin-like
Gene3D G3DSA:1.10.472.10: no description
Pfam PF00134: Cyclin_N
PANTHER PTHR10026:SF4: GB DEF: CTD KINASE BETA SUBUNIT (CTD KINASE 38 KDA SUBUNIT) (CTDK-I BETA SUBUNIT)
PANTHER PTHR10026: CYCLIN
Rpa12p SUPERFAMILY SSF57783: Zinc beta-ribbon
Gene3D G3DSA:2.20.25.10: no description
PANTHER PTHR11239:SF3: DNA-DIRECTED RNA POLYMERASE I
PANTHER PTHR11239: DNA-DIRECTED RNA POLYMERASE
Pfam PF01096: TFIIS_C
Pfam PF02150: RNA_POL_M_15KD
SMART SM00661: RNA polymerase subunit
SMART SM00440: C2C2 Zinc finger
Tfa1p Pfam PF08271: TF_Zn_Ribbon
SUPERFAMILY SSF57783: Zinc beta-ribbon
Pfam PF02002: TFIIE_alpha
SMART SM00531: Transcription initiation factor IIE
Gene3D G3DSA:3.30.40.10: no description
PANTHER PTHR13097:SF3: GENERAL TRANSCRIPTION FACTOR IIE SUBUNIT 1
PANTHER PTHR13097: TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT
Elf1p SUPERFAMILY SSF57783: Zinc beta-ribbon
PANTHER PTHR20934:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR20934: UNCHARACTERIZED
Pfam PF05129: Elf1
Clb4p SUPERFAMILY SSF47954: Cyclin-like
Gene3D G3DSA:1.10.472.10: no description
SMART SM00385: domain present in cyclins, TFIIB and Retinob
Pfam PF00134: Cyclin_N
Pfam PF02984: Cyclin_C
PIR superfamily PIRSF001771: Cyclin, A/B/D/E types
PANTHER PTHR10177:SF27: CYCLIN B
PANTHER PTHR10177: CYCLINE
Bur2p Gene3D G3DSA:1.10.472.10: no description
SUPERFAMILY SSF47954: Cyclin-like
none
Cln1p SMART SM00385: domain present in cyclins, TFIIB and Retinob
SUPERFAMILY SSF47954: Cyclin-like
Gene3D G3DSA:1.10.472.10: no description
Pfam PF00134: Cyclin_N
PIR superfamily PIRSF001770: G1 cyclin, CLN1/CLN2/Puc1 types
PANTHER PTHR10177:SF11: G1/S-SPECIFIC CYCLIN CLN
PANTHER PTHR10177: CYCLINE
Ssn8p SUPERFAMILY SSF47954: Cyclin-like
Gene3D G3DSA:1.10.472.10: no description
SMART SM00385: domain present in cyclins, TFIIB and Retinob
PIR superfamily PIRSF028758: Cyclin, C/H/G types
PANTHER PTHR10026:SF47: RNA POLYMERASE II HOLOENZYME CYCLIN-LIKE SUBUNIT
PANTHER PTHR10026: CYCLIN
Pfam PF00134: Cyclin_N
Pcl1p SMART SM00385: domain present in cyclins, TFIIB and Retinob
SUPERFAMILY SSF47954: Cyclin-like
Gene3D G3DSA:1.10.472.10: no description
PANTHER PTHR10177:SF85: SUBFAMILY NOT NAMED
PANTHER PTHR10177: CYCLINE
PIR superfamily PIRSF016511: Cyclin, fungal Pcl/HCS26 type
Pfam PF00134: Cyclin_N
Trm112p Gene3D G3DSA:2.20.25.10: no description
PANTHER PTHR12773:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR12773: UPF0315 PROTEIN-RELATED\
Pfam PF03966: Trm112p
Cln2p SUPERFAMILY SSF47954: Cyclin-like
SMART SM00385: domain present in cyclins, TFIIB and Retinob
Gene3D G3DSA:1.10.472.10: no description
PIR superfamily PIRSF001770: G1 cyclin, CLN1/CLN2/Puc1 types
PANTHER PTHR10177:SF11: G1/S-SPECIFIC CYCLIN CLN
PANTHER PTHR10177: CYCLINE
Pfam PF00134: Cyclin_N
Ccl1p Gene3D G3DSA:1.10.472.10: no description
SUPERFAMILY SSF47954: Cyclin-like
SMART SM00385: domain present in cyclins, TFIIB and Retinob
Pfam PF00134: Cyclin_N
TIGRFAMs TIGR00569: ccl1: cyclin ccl1
PANTHER PTHR10026:SF8: CYCLIN H
PANTHER PTHR10026: CYCLIN
Clb2p SUPERFAMILY SSF47954: Cyclin-like
SMART SM00385: domain present in cyclins, TFIIB and Retinob
Gene3D G3DSA:1.10.472.10: no description
Pfam PF00134: Cyclin_N
Pfam PF02984: Cyclin_C
PANTHER PTHR10177:SF27: CYCLIN B
PANTHER PTHR10177: CYCLINE
PIR superfamily PIRSF001771: Cyclin, A/B/D/E types
Clb5p Gene3D G3DSA:1.10.472.10: no description
SUPERFAMILY SSF47954: Cyclin-like
SMART SM00385: domain present in cyclins, TFIIB and Retinob
Pfam PF00134: Cyclin_N
Pfam PF02984: Cyclin_C
PIR superfamily PIRSF001771: Cyclin, A/B/D/E types
PANTHER PTHR10177:SF27: CYCLIN B
PANTHER PTHR10177: CYCLINE

Unique domains/motifs


This table lists domains/motifs that are unique to Sua7p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Sua7p domain/motif information see the external links section.

Last updated on 2013-12-16

Domain/motifs that are unique to Sua7p
Database source Accession number Description
PANTHER PTHR11618:SF13 TRANSCRIPTION INITIATION FACTOR IIB

Transmembrane Domains


This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Sua7p .

Signal Peptide(s)


This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Sua7p .


The following external links can be used to directly search external databases for domain/motif information for Sua7p .