FUM1/YPL262W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Fum1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Fum1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Fum1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Fum1p
Protein	Motifs in common with Fum1p	Other motifs in this protein (but not in Fum1p )
Arg4p	Pfam PF00206: Lyase_1 Gene3D G3DSA:1.10.275.10: no description Gene3D G3DSA:1.20.200.10: no description Gene3D G3DSA:1.10.40.30: no description PANTHER PTHR11444: ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE SUPERFAMILY SSF48557: L-aspartase-like PRINTS PR00149: FUMRATELYASE	TIGRFAMs TIGR00838: argH: argininosuccinate lyase PANTHER PTHR11444:SF3: ARGININOSUCCINATE LYASE PRINTS PR00145: ARGSUCLYASE
Ade13p	PANTHER PTHR11444: ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE SUPERFAMILY SSF48557: L-aspartase-like Pfam PF00206: Lyase_1 Gene3D G3DSA:1.10.275.10: no description Gene3D G3DSA:1.20.200.10: no description PRINTS PR00149: FUMRATELYASE	PANTHER PTHR11444:SF2: ADENYLOSUCCINATE LYASE SMART SM00998: Adenylosuccinate lyase C-terminus Pfam PF10397: ADSL_C TIGRFAMs TIGR00928: purB: adenylosuccinate lyase

Unique domains/motifs

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This table lists domains/motifs that are unique to Fum1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Fum1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Fum1p
Database source	Accession number	Description
PANTHER	PTHR11444:SF1	ASPARTATE AMMONIA LYASE
Pfam	PF10415	FumaraseC_C
TIGRFAMs	TIGR00979	fumC_II: fumarate hydratase, class II

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Fum1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Fum1p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Fum1p .