DDC1/YPL194W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ddc1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Ddc1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ddc1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ddc1p
Protein	Motifs in common with Ddc1p	Other motifs in this protein (but not in Ddc1p )
Pol30p	SUPERFAMILY SSF55979: DNA clamp	Gene3D G3DSA:3.70.10.10: no description PANTHER PTHR11352:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11352: PROLIFERATING CELL NUCLEAR ANTIGEN TIGRFAMs TIGR00590: pcna: proliferating cell nuclear antigen (pcna) Pfam PF02747: PCNA_C Pfam PF00705: PCNA_N PRINTS PR00339: PCNACYCLIN

Unique domains/motifs

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This table lists domains/motifs that are unique to Ddc1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ddc1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Ddc1p
Database source	Accession number	Description
PRINTS	PR02063	DNADAMAGECP1
Pfam	PF04139	Rad9

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Ddc1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Ddc1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Ddc1p .