MEX67/YPL169C Domains/Motifs and Signal Peptides 
To directly search external databases for Mex67p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Mex67p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Mex67p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Mex67p | ||
|---|---|---|
| Protein | Motifs in common with Mex67p | Other motifs in this protein (but not in Mex67p ) |
| Ccr4p | SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description |
Pfam PF03372: Exo_endo_phos Pfam PF12799: LRR_4 PANTHER PTHR12121:SF13: CARBON CATABOLITE REPRESSOR PROTEIN 4 PANTHER PTHR12121: CARBON CATABOLITE REPRESSOR PROTEIN 4 SUPERFAMILY SSF56219: DNase I-like Gene3D G3DSA:3.60.10.10: no description SMART SM00369: Leucine-rich repeats, typical (most populate |
| Ede1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
SUPERFAMILY SSF47473: EF-hand SMART SM00027: Eps15 homology domain SMART SM00054: EF-hand, calcium binding motif SMART SM00165: Ubiquitin associated domain Pfam PF12763: efhand_3 Pfam PF00627: UBA PANTHER PTHR11216:SF10: UNCHARACTERIZED PANTHER PTHR11216: EH DOMAIN Gene3D G3DSA:1.10.238.10: no description |
| Shp1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
SMART SM00553: Domain present in Saccharomyces cerevisiae S SMART SM00166: Domain present in ubiquitin-regulatory prote Pfam PF08059: SEP Pfam PF00789: UBX PANTHER PTHR23333:SF5: UBX DOMAIN CONTAINING PROTEIN PANTHER PTHR23333: UBX DOMAIN CONTAINING PROTEIN SUPERFAMILY SSF54236: Ubiquitin-like SUPERFAMILY SSF102848: NSFL1 (p97 ATPase) cofactor p47, SEP domain Gene3D G3DSA:3.10.20.90: no description |
| Ubp14p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z SMART SM00165: Ubiquitin associated domain Gene3D G3DSA:3.30.40.10: no description PIR superfamily PIRSF016308: Ubiquitin-specific protease (ubiquitin carboxyl-terminal hydrolase) SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006:SF175: HYPOTHETICAL PROTEIN PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH Pfam PF02148: zf-UBP Pfam PF00627: UBA |
| Ecm33p | SUPERFAMILY SSF52058: L domain-like |
Gene3D G3DSA:3.80.20.20: no description PANTHER PTHR31018: SPORULATION-SPECIFIC PROTEIN-RELATED |
| Amn1p | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like PANTHER PTHR23125:SF9: GB DEF: HYPOTHETICAL 62.7 KDA PROTEIN IN CNS1-CDC28 INTERGENIC REGION PANTHER PTHR23125: F-BOX/LEUCINE RICH REPEAT PROTEIN SMART SM00367: Leucine-rich repeat - CC (cysteine-containin |
| Sps22p | SUPERFAMILY SSF52058: L domain-like |
Gene3D G3DSA:3.80.20.20: no description PANTHER PTHR31018: SPORULATION-SPECIFIC PROTEIN-RELATED |
| Pst1p | SUPERFAMILY SSF52058: L domain-like |
PANTHER PTHR31018: SPORULATION-SPECIFIC PROTEIN-RELATED |
| Ydr131cp | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Ubc1p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
SMART SM00212: Ubiquitin-conjugating enzyme E2, catalytic d Gene3D G3DSA:3.10.110.10: no description SUPERFAMILY SSF54495: UBC-like PANTHER PTHR24067:SF29: UBIQUITIN-CONJUGATING ENZYME E2 K PANTHER PTHR24067: UBIQUITIN-CONJUGATING ENZYME E2 Pfam PF00179: UQ_con Pfam PF09288: UBA_3 |
| Don1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
SMART SM00546: Domain that may be involved in binding ubiqu Pfam PF02845: CUE |
| Ydr306cp | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Swa2p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
PANTHER PTHR23172:SF19: AUXILIN PANTHER PTHR23172: AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED Pfam PF09145: Ubiq-assoc Gene3D G3DSA:1.25.40.10: no description Gene3D G3DSA:1.10.287.110: no description SUPERFAMILY SSF46565: Chaperone J-domain SUPERFAMILY SSF48452: TPR-like |
| Ubx5p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
Pfam PF13899: Thioredoxin_7 Pfam PF00789: UBX SMART SM00594: no description SMART SM00166: Domain present in ubiquitin-regulatory prote Gene3D G3DSA:3.40.30.10: no description Gene3D G3DSA:3.10.20.90: no description PANTHER PTHR23322:SF6: FAS-ASSOCIATED FACTOR-RELATED PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN SUPERFAMILY SSF54236: Ubiquitin-like |
| Sps2p | SUPERFAMILY SSF52058: L domain-like |
Gene3D G3DSA:3.80.20.20: no description PANTHER PTHR31018: SPORULATION-SPECIFIC PROTEIN-RELATED |
| Rad23p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF00627: UBA Pfam PF00240: ubiquitin Pfam PF09280: XPC-binding SUPERFAMILY SSF54236: Ubiquitin-like SUPERFAMILY SSF101238: XPC-binding domain Gene3D G3DSA:3.10.20.90: no description Gene3D G3DSA:1.10.10.540: no description PRINTS PR01839: RAD23PROTEIN PANTHER PTHR10621:SF0: UV EXCISION REPAIR PROTEIN RAD23 PANTHER PTHR10621: UV EXCISION REPAIR PROTEIN RAD23 SMART SM00213: Ubiquitin homologues SMART SM00165: Ubiquitin associated domain SMART SM00727: Heat shock chaperonin-binding motif. TIGRFAMs TIGR00601: rad23: UV excision repair protein Rad23 |
| Pac2p | Gene3D G3DSA:3.80.10.10: no description |
PANTHER PTHR15140:SF6: SUBFAMILY NOT NAMED PANTHER PTHR15140: TUBULIN-SPECIFIC CHAPERONE E Pfam PF01302: CAP_GLY Pfam PF13516: LRR_6 Pfam PF00560: LRR_1 SUPERFAMILY SSF52047: RNI-like SUPERFAMILY SSF74924: Cap-Gly domain SUPERFAMILY SSF54236: Ubiquitin-like SMART SM01052: no description Gene3D G3DSA:2.30.30.190: no description |
| Ntf2p | SUPERFAMILY SSF54427: NTF2-like Gene3D G3DSA:3.10.450.50: no description |
PANTHER PTHR12612: NUCLEAR TRANSPORT FACTOR 2 Pfam PF02136: NTF2 |
| Ddi1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF09668: Asp_protease Pfam PF00627: UBA SUPERFAMILY SSF50630: Acid proteases Gene3D G3DSA:2.40.70.10: no description PANTHER PTHR12917:SF1: DNA-DAMAGE INDUCIBLE PROTEIN DDI1 (V-SNARE-MASTER 1) PANTHER PTHR12917: ASPARTYL PROTEASE DDI-RELATED SMART SM00165: Ubiquitin associated domain |
| Gts1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF01412: ArfGap Pfam PF00627: UBA SMART SM00105: Putative GTP-ase activating proteins for the SMART SM00165: Ubiquitin associated domain PANTHER PTHR23180:SF23: CENTAURIN/ARF-RELATED PANTHER PTHR23180: CENTAURIN/ARF SUPERFAMILY SSF57863: ArfGap/RecO-like zinc finger PRINTS PR00405: REVINTRACTNG |
| Egd2p | Gene3D G3DSA:1.10.8.10: no description |
PIR superfamily PIRSF015901: Nascent polypeptide-associated complex, alpha subunit PANTHER PTHR21713:SF0: SUBFAMILY NOT NAMED PANTHER PTHR21713: NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Pfam PF01849: NAC Pfam PF00627: UBA |
| Tim44p | SUPERFAMILY SSF54427: NTF2-like |
PANTHER PTHR10721: MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 PIR superfamily PIRSF037871: Import inner membrane translocase, TIM44 subunit, mitochondrial type Pfam PF04280: Tim44 SMART SM00978: no description |
| Cyr1p | SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF81606: PP2C-like SUPERFAMILY SSF55073: Nucleotide cyclase SUPERFAMILY SSF52047: RNI-like SMART SM00789: Adenylate cyclase G-alpha binding doma SMART SM00314: Ras association (RalGDS/AF-6) domain SMART SM00332: Serine/threonine phosphatases, family SMART SM00044: Adenylyl- / guanylyl cyclase, catalyti PANTHER PTHR23155:SF19: ADENYLATE CYCLASE PANTHER PTHR23155: LEUCINE-RICH REPEAT-CONTAINING PROTEIN Gene3D G3DSA:3.60.40.10: no description Gene3D G3DSA:3.30.70.1230: no description Pfam PF00481: PP2C Pfam PF12799: LRR_4 Pfam PF13855: LRR_8 Pfam PF00211: Guanylate_cyc Pfam PF00560: LRR_1 Pfam PF08509: Ad_cyc_g-alpha Pfam PF00788: RA |
| Mhp1p | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Rad7p | Gene3D G3DSA:3.80.10.10: no description |
PANTHER PTHR23125:SF43: RAD7 PANTHER PTHR23125: F-BOX/LEUCINE RICH REPEAT PROTEIN SUPERFAMILY SSF52047: RNI-like |
| Grr1p | Gene3D G3DSA:3.80.10.10: no description |
SMART SM00256: A Receptor for Ubiquitination Targets SMART SM00367: Leucine-rich repeat - CC (cysteine-containin PANTHER PTHR23125:SF63: GB DEF: UBIQUITIN LIGASE COMPLEX F-BOX PROTEIN GRR1 PANTHER PTHR23125: F-BOX/LEUCINE RICH REPEAT PROTEIN SUPERFAMILY SSF52047: RNI-like |
| Cue2p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
SMART SM00546: Domain that may be involved in binding ubiqu SMART SM00463: Small MutS-related domain Pfam PF02845: CUE Pfam PF01713: Smr |
| Mtr2p | Gene3D G3DSA:3.10.450.50: no description SUPERFAMILY SSF54427: NTF2-like |
Pfam PF10429: Mtr2 |
| Sds22p | SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description |
SMART SM00365: Leucine-rich repeat, SDS22-like subfamily SMART SM00369: Leucine-rich repeats, typical (most populate PANTHER PTHR10588: FAMILY NOT NAMED Pfam PF12799: LRR_4 Pfam PF13855: LRR_8 |
| Dcn1p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
PANTHER PTHR12281:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12281: RP42 RELATED Pfam PF03556: Cullin_binding |
| Ylr352wp | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like PANTHER PTHR23125:SF188: SUBFAMILY NOT NAMED PANTHER PTHR23125: F-BOX/LEUCINE RICH REPEAT PROTEIN |
| Ubx2p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF00789: UBX PANTHER PTHR23322:SF14: UBX DOMAIN CONTAINING PROTEIN (FRAGMENT) PANTHER PTHR23322: FAS-ASSOCIATED PROTEIN Gene3D G3DSA:3.10.20.90: no description SMART SM00166: Domain present in ubiquitin-regulatory prote |
| Vps9p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF02204: VPS9 Pfam PF02845: CUE SUPERFAMILY SSF109993: VPS9 domain SMART SM00167: Domain present in VPS9 SMART SM00546: Domain that may be involved in binding ubiqu PANTHER PTHR23101:SF25: SUBFAMILY NOT NAMED PANTHER PTHR23101: RAB GDP/GTP EXCHANGE FACTOR |
| Ctf13p | Gene3D G3DSA:3.80.10.10: no description |
none |
| Rna1p | Gene3D G3DSA:3.80.10.10: no description |
Pfam PF13516: LRR_6 PANTHER PTHR25480:SF105: NOVEL PROTEIN (FRAGMENT) PANTHER PTHR25480: FAMILY NOT NAMED SUPERFAMILY SSF52047: RNI-like SMART SM00368: Leucine rich repeat, ribonuclease inhibitor |
| Roy1p | Gene3D G3DSA:3.80.10.10: no description |
none |
| Dsk2p | Gene3D G3DSA:1.10.8.10: no description SUPERFAMILY SSF46934: UBA-like |
Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues SMART SM00727: Heat shock chaperonin-binding motif. SMART SM00165: Ubiquitin associated domain SUPERFAMILY SSF54236: Ubiquitin-like Pfam PF00240: ubiquitin Pfam PF00627: UBA PANTHER PTHR10677: UBIQUILIN |
| Bre5p | SUPERFAMILY SSF54427: NTF2-like Gene3D G3DSA:3.10.450.50: no description |
Pfam PF02136: NTF2 PANTHER PTHR10693:SF11: RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN PANTHER PTHR10693: RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN |
| Cue5p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF02845: CUE SMART SM00546: Domain that may be involved in binding ubiqu |
| Dia2p | Gene3D G3DSA:3.80.10.10: no description |
PANTHER PTHR22904:SF50: PREDICTED: SIMILAR TO TTC9C PROTEIN PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN Pfam PF00646: F-box SUPERFAMILY SSF48452: TPR-like SUPERFAMILY SSF52047: RNI-like Gene3D G3DSA:1.25.40.10: no description SMART SM00256: A Receptor for Ubiquitination Targets SMART SM00367: Leucine-rich repeat - CC (cysteine-containin |
| Rup1p | SUPERFAMILY SSF46934: UBA-like Gene3D G3DSA:1.10.8.10: no description |
Pfam PF00627: UBA SMART SM00165: Ubiquitin associated domain PANTHER PTHR10175: UBA DOMAIN-CONTAINING PROTEIN RUP1-RELATED |
| Her1p | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Sog2p | SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description |
SMART SM00369: Leucine-rich repeats, typical (most populate Pfam PF10428: SOG2 Pfam PF13855: LRR_8 PANTHER PTHR23155:SF264: PREDICTED PROTEIN PANTHER PTHR23155: LEUCINE-RICH REPEAT-CONTAINING PROTEIN |
| Nud1p | Gene3D G3DSA:3.80.10.10: no description SUPERFAMILY SSF52058: L domain-like |
PANTHER PTHR10588:SF101: SUBFAMILY NOT NAMED PANTHER PTHR10588: FAMILY NOT NAMED |
| Gip3p | Gene3D G3DSA:3.80.10.10: no description |
SUPERFAMILY SSF52047: RNI-like |
| Lea1p | SUPERFAMILY SSF52058: L domain-like Gene3D G3DSA:3.80.10.10: no description |
SMART SM00446: occurring C-terminal to leucine-rich repeats PANTHER PTHR10552: U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A |
This table lists domains/motifs that are unique to Mex67p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Mex67p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Mex67p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR10662 | NUCLEAR RNA EXPORT FACTOR |
| PANTHER | PTHR10662:SF22 | MRNA EXPORT FACTOR MEX67 |
| Pfam | PF03943 | TAP_C |
| SMART | SM00804 | C-terminal domain of vertebrate Tap protein |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Mex67p .
