ADE2/YOR128C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ade2p domain/motif information see the external links section.

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Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Ade2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGERFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ade2p domain/motif information see the external links section.

Last updated on 2010-11-23

Other Saccharomyces cerevisiae proteins that contain motifs found in Ade2p
Protein	Motifs in common with Ade2p	Other motifs in this protein (but not in Ade2p )
Pby1p	SUPERFAMILY SSF56059: SSF56059	SUPERFAMILY SSF64167: SurE-like_Pase/nucleotidase PANTHER PTHR12241: Tub_tyr_ligase Pfam PF03133: TTL Pfam PF01975: SurE PANTHER PTHR12241:SF7: PTHR12241:SF7 TIGRFAMs TIGR00087: surE PROSITE PS51221: TTL Gene3D G3DSA:3.40.1210.10: SurE-like_Pase/nucleotidase ProDom PD005378: SurE
Dur1,2p	SUPERFAMILY SSF52440: PreATP-grasp-like SUPERFAMILY SSF56059: SSF56059 SUPERFAMILY SSF51246: Rudmnt_hyb_motif	SUPERFAMILY SSF75304: Amidase_sig_enz TIGRFAMs TIGR02712: urea_carbox PROSITE PS00867: CPSASE_2 TIGRFAMs TIGR02713: allophanate_hyd Pfam PF02785: Biotin_carb_C Gene3D G3DSA:3.90.1300.10: Amidase_sig_enz Pfam PF02626: AHS2 TIGRFAMs TIGR00724: urea_amlyse_rel SMART SM00797: AHS2 SUPERFAMILY SSF51230: Hybrid_motif Pfam PF00289: CPSase_L_chain Pfam PF00364: Biotin_lipoyl PROSITE PS50975: ATP_GRASP Gene3D G3DSA:3.30.470.20: ATP_grasp_subdomain_2 SMART SM00796: AHS1 PROSITE PS50979: BC Gene3D G3DSA:3.40.50.20: Pre-ATP_grasp PANTHER PTHR18866: PTHR18866 Pfam PF01425: Amidase PANTHER PTHR18866:SF14: PTHR18866:SF14 Pfam PF02786: CPSase_L_D2 Gene3D G3DSA:2.40.50.100: G3DSA:2.40.50.100 PROSITE PS50968: BIOTINYL_LIPOYL PROSITE PS00866: CPSASE_1 PROSITE PS00188: BIOTIN
Pyc2p	SUPERFAMILY SSF52440: PreATP-grasp-like SUPERFAMILY SSF56059: SSF56059 SUPERFAMILY SSF51246: Rudmnt_hyb_motif	Pfam PF00682: HMGL-like PIR superfamily PIRSF001594: Pyruv_carbox PROSITE PS00867: CPSASE_2 PRINTS PR00098: CPSASE Pfam PF02785: Biotin_carb_C SUPERFAMILY SSF51569: SSF51569 PANTHER PTHR18866:SF10: PTHR18866:SF10 SUPERFAMILY SSF51230: Hybrid_motif Pfam PF00289: CPSase_L_chain Pfam PF00364: Biotin_lipoyl PROSITE PS50975: ATP_GRASP Gene3D G3DSA:3.30.470.20: ATP_grasp_subdomain_2 PROSITE PS50979: BC PANTHER PTHR18866: PTHR18866 Gene3D G3DSA:3.40.50.20: Pre-ATP_grasp Pfam PF02436: PYC_OADA SUPERFAMILY SSF89000: SSF89000 Pfam PF02786: CPSase_L_D2 PROSITE PS50991: PYR_CT TIGRFAMs TIGR01235: pyruv_carbox Gene3D G3DSA:2.40.50.100: G3DSA:2.40.50.100 PROSITE PS50968: BIOTINYL_LIPOYL Gene3D G3DSA:3.20.20.70: Aldolase_TIM PROSITE PS00866: CPSASE_1 PROSITE PS00188: BIOTIN
Pyc1p	SUPERFAMILY SSF52440: PreATP-grasp-like SUPERFAMILY SSF56059: SSF56059 SUPERFAMILY SSF51246: Rudmnt_hyb_motif	Pfam PF00682: HMGL-like PIR superfamily PIRSF001594: Pyruv_carbox PROSITE PS00867: CPSASE_2 PRINTS PR00098: CPSASE Pfam PF02785: Biotin_carb_C SUPERFAMILY SSF51569: SSF51569 PANTHER PTHR18866:SF10: PTHR18866:SF10 SUPERFAMILY SSF51230: Hybrid_motif Pfam PF00289: CPSase_L_chain Pfam PF00364: Biotin_lipoyl PROSITE PS50975: ATP_GRASP Gene3D G3DSA:3.30.470.20: ATP_grasp_subdomain_2 PROSITE PS50979: BC PANTHER PTHR18866: PTHR18866 Gene3D G3DSA:3.40.50.20: Pre-ATP_grasp Pfam PF02436: PYC_OADA SUPERFAMILY SSF89000: SSF89000 Pfam PF02786: CPSase_L_D2 PROSITE PS50991: PYR_CT TIGRFAMs TIGR01235: pyruv_carbox Gene3D G3DSA:2.40.50.100: G3DSA:2.40.50.100 PROSITE PS50968: BIOTINYL_LIPOYL Gene3D G3DSA:3.20.20.70: Aldolase_TIM PROSITE PS00866: CPSASE_1 PROSITE PS00188: BIOTIN
Ade5,7p	SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF51246: Rudiment single hybrid motif	PROSITE PS00184: GARS SUPERFAMILY SSF56042: PurM C-terminal domain-like SUPERFAMILY SSF55326: PurM N-terminal domain-like Pfam PF02844: GARS_N Pfam PF01071: GARS_A Pfam PF02843: GARS_C Pfam PF00586: AIRS Pfam PF02769: AIRS_C PANTHER PTHR10520:SF2: PHOSPHORIBOSYLFORMYLGLYCINAMIDINE CYCLO-LIGASE (AIRS) (PHOSPHORIBOSYL-AMINOIMIDAZOLE SYNTHETASE) PANTHER PTHR10520: PHOSPHORIBOSYLAMINE-GLYCINE LIGASE-RELATED
Lsc2p	SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like	PROSITE PS01217: SUCCINYL_COA_LIG_3 SUPERFAMILY SSF52210: Succinyl-CoA synthetase domains Pfam PF08442: ATP-grasp_2 Pfam PF00549: Ligase_CoA PANTHER PTHR11815: SUCCINYL-COA SYNTHETASE BETA CHAIN
Ura2p	SUPERFAMILY SSF52440: PreATP-grasp-like SUPERFAMILY SSF56059: SSF56059	TIGRFAMs TIGR01369: CPSaseII_lrg TIGRFAMs TIGR01368: CPSaseIIsmall PANTHER PTHR11405:SF3: PTHR11405:SF3 SUPERFAMILY SSF48108: CarbamoylP_synth_lsu_oligo SUPERFAMILY SSF53671: Asp/Orn_carbamoyltranf Pfam PF02729: OTCace_N PROSITE PS00867: CPSASE_2 PRINTS PR00101: ATCASE PRINTS PR00097: ANTSNTHASEII SUPERFAMILY SSF52335: SSF52335 PRINTS PR00098: CPSASE Pfam PF00289: CPSase_L_chain PROSITE PS50975: ATP_GRASP PRINTS PR00099: CPSGATASE Gene3D G3DSA:3.30.470.20: ATP_grasp_subdomain_2 Pfam PF02142: MGS SUPERFAMILY SSF52021: CP_synthsmall PRINTS PR00096: GATASE Pfam PF02786: CPSase_L_D2 SUPERFAMILY SSF51556: SSF51556 Gene3D G3DSA:3.20.20.140: G3DSA:3.20.20.140 Gene3D G3DSA:3.40.50.1380: G3DSA:3.40.50.1380 Pfam PF00988: CPSase_sm_chain Gene3D G3DSA:3.40.50.880: G3DSA:3.40.50.880 Gene3D G3DSA:3.40.50.1370: G3DSA:3.40.50.1370 PRINTS PR00100: AOTCASE PROSITE PS00442: GATASE_TYPE_I SUPERFAMILY SSF52317: SSF52317 Gene3D G3DSA:3.40.50.20: Pre-ATP_grasp PANTHER PTHR11405: PTHR11405 Pfam PF02787: CPSase_L_D3 Pfam PF00185: OTCace Gene3D G3DSA:3.50.30.20: G3DSA:3.50.30.20 PROSITE PS00097: CARBAMOYLTRANSFERASE Pfam PF00117: GATase PROSITE PS00866: CPSASE_1 TIGRFAMs TIGR00670: asp_carb_tr
Cpa2p	SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF52440: PreATP-grasp domain	PROSITE PS00866: CPSASE_1 PROSITE PS00867: CPSASE_2 PANTHER PTHR11405: CARBAMOYLTRANSFERASE RELATED PRINTS PR00098: CPSASE SUPERFAMILY SSF48108: Carbamoyl phosphate synthetase, large subunit connection domain SUPERFAMILY SSF52335: Methylglyoxal synthase-like Pfam PF00289: CPSase_L_chain Pfam PF02786: CPSase_L_D2 Pfam PF02787: CPSase_L_D3
Vip1p	SUPERFAMILY SSF56059: SSF56059	PANTHER PTHR12750: PTHR12750 SUPERFAMILY SSF53254: SSF53254 Pfam PF00328: Acid_phosphat_A PANTHER PTHR12750:SF8: PTHR12750:SF8
Hfa1p	SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF51246: Rudiment single hybrid motif SUPERFAMILY SSF52440: PreATP-grasp domain	PANTHER PTHR18866:SF6: ACETYL-COA CARBOXYLASE PANTHER PTHR18866: CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE SMART SM00878: no description Pfam PF00289: CPSase_L_chain Pfam PF02786: CPSase_L_D2 Pfam PF02785: Biotin_carb_C Pfam PF00364: Biotin_lipoyl Pfam PF08326: ACC_central Pfam PF01039: Carboxyl_trans SUPERFAMILY SSF52096: ClpP/crotonase SUPERFAMILY SSF51230: Single hybrid motif PROSITE PS00188: BIOTIN PROSITE PS00866: CPSASE_1 PROSITE PS00867: CPSASE_2
Acc1p	SUPERFAMILY SSF52440: PreATP-grasp-like SUPERFAMILY SSF56059: SSF56059 SUPERFAMILY SSF51246: Rudmnt_hyb_motif	PANTHER PTHR18866:SF6: PTHR18866:SF6 PROSITE PS50989: COA_CT_CTER SUPERFAMILY SSF52096: SSF52096 Pfam PF01039: Carboxyl_trans PROSITE PS00867: CPSASE_2 Pfam PF02785: Biotin_carb_C SUPERFAMILY SSF51230: Hybrid_motif Pfam PF00289: CPSase_L_chain Pfam PF00364: Biotin_lipoyl PROSITE PS50975: ATP_GRASP Gene3D G3DSA:3.30.470.20: ATP_grasp_subdomain_2 PROSITE PS50979: BC PANTHER PTHR18866: PTHR18866 Gene3D G3DSA:3.40.50.20: Pre-ATP_grasp PROSITE PS50980: COA_CT_NTER Pfam PF02786: CPSase_L_D2 Gene3D G3DSA:3.90.226.10: G3DSA:3.90.226.10 Gene3D G3DSA:2.40.50.100: G3DSA:2.40.50.100 PROSITE PS50968: BIOTINYL_LIPOYL Pfam PF08326: ACC_central PROSITE PS00866: CPSASE_1 PROSITE PS00188: BIOTIN
Gsh2p	SUPERFAMILY SSF56059: SSF56059 SUPERFAMILY SSF52440: PreATP-grasp-like	TIGRFAMs TIGR01986: glut_syn_euk Gene3D G3DSA:3.30.470.20: ATP_grasp_subdomain_2 Pfam PF03917: GSH_synth_ATP PIR superfamily PIRSF001558: GSHase Gene3D G3DSA:3.40.50.1760: Glutathione_synth_subst-bd_euk Gene3D G3DSA:3.30.1490.80: Glutathione_synthase_N_euk Pfam PF03199: GSH_synthase PANTHER PTHR11130: GSH_synth_ATP_bd

Unique domains/motifs

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This table lists domains/motifs that are unique to Ade2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGERFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ade2p domain/motif information see the external links section.

Last updated on 2010-11-23

Domain/motifs that are unique to Ade2p
Database source	Accession number	Description
PIR superfamily	PIRSF001340	Phosphoribosylaminoimidazole carboxylase
PANTHER	PTHR23047	PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE ATPASE-SUBUNIT
PANTHER	PTHR23047:SF1	PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE ATPASE-SUBUNIT
Pfam	PF00731	AIRC
Pfam	PF02222	ATP-grasp
SUPERFAMILY	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Ade2p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Ade2p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Ade2p .

SGD^tm pages Database Copyright © 1997-2010 The Board of Trustees of Leland Stanford Junior University. Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The SGD project at Stanford University is supported by a Genome Research Resource Grant from the US National Human Genome Research Institute, part of the US National Institutes of Health.