CAT5/YOR125C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Cat5p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Cat5p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cat5p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Cat5p
Protein	Motifs in common with Cat5p	Other motifs in this protein (but not in Cat5p )
Rnr4p	SUPERFAMILY SSF47240: Ferritin-like	PANTHER PTHR23409:SF6: SUBFAMILY NOT NAMED PANTHER PTHR23409: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN Gene3D G3DSA:1.10.620.20: no description Pfam PF00268: Ribonuc_red_sm
Rnr2p	SUPERFAMILY SSF47240: Ferritin-like	Gene3D G3DSA:1.10.620.20: no description Pfam PF00268: Ribonuc_red_sm PANTHER PTHR23409:SF6: SUBFAMILY NOT NAMED PANTHER PTHR23409: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN

Unique domains/motifs

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This table lists domains/motifs that are unique to Cat5p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Cat5p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Cat5p
Database source	Accession number	Description
PANTHER	PTHR11237	COENZYME Q10 BIOSYNTHESIS PROTEIN 7
Pfam	PF03232	COQ7

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Cat5p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Cat5p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Cat5p .