UBP2/YOR124C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ubp2p domain/motif information see the external links section.

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Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Ubp2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ubp2p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ubp2p
Protein	Motifs in common with Ubp2p	Other motifs in this protein (but not in Ubp2p )
Ubp13p	SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED	Gene3D G3DSA:2.20.210.10: no description PANTHER PTHR24006:SF123: MEPRIN AND TRAF HOMOLOGY (MATH) DOMAIN-CONTAINING PROTEIN
Ubp14p	SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH	SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z SMART SM00165: Ubiquitin associated domain Gene3D G3DSA:3.30.40.10: no description Gene3D G3DSA:1.10.8.10: no description PIR superfamily PIRSF016308: Ubiquitin-specific protease (ubiquitin carboxyl-terminal hydrolase) SUPERFAMILY SSF46934: UBA-like PANTHER PTHR24006:SF175: HYPOTHETICAL PROTEIN Pfam PF02148: zf-UBP Pfam PF00627: UBA
Cyk3p	SUPERFAMILY SSF54001: Cysteine proteinases	Gene3D G3DSA:2.30.30.40: no description SMART SM00326: Src homology SMART SM00460: Transglutaminase/protease-like homologues PANTHER PTHR10661:SF52: SH3 DOMAIN-CONTAINING PROTEIN PANTHER PTHR10661: SH3 DOMAIN-CONTAINING PROTEIN SUPERFAMILY SSF50044: SH3-domain
Ubp1p	SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH	PANTHER PTHR24006:SF176: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN
Doa4p	Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases	SMART SM00450: Rhodanese Homology Domain PANTHER PTHR24006:SF42: SUBFAMILY NOT NAMED SUPERFAMILY SSF52821: Rhodanese/Cell cycle control phosphatase Gene3D G3DSA:3.40.250.10: no description
Ubp9p	SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED	Gene3D G3DSA:2.20.210.10: no description PANTHER PTHR24006:SF123: MEPRIN AND TRAF HOMOLOGY (MATH) DOMAIN-CONTAINING PROTEIN
Ubp5p	Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases	Pfam PF00581: Rhodanese PANTHER PTHR24006:SF42: SUBFAMILY NOT NAMED Gene3D G3DSA:3.40.250.10: no description SUPERFAMILY SSF52821: Rhodanese/Cell cycle control phosphatase SMART SM00450: Rhodanese Homology Domain
Ubp3p	PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR24006:SF73: SUBFAMILY NOT NAMED
Rad4p	SUPERFAMILY SSF54001: Cysteine proteinases	SMART SM01030: Rad4 beta-hairpin domain SMART SM01031: Rad4 beta-hairpin domain SMART SM01032: Rad4 beta-hairpin domain PANTHER PTHR12135: DNA REPAIR PROTEIN XP-C / RAD4 Pfam PF03835: Rad4 Pfam PF10405: BHD_3 Pfam PF10403: BHD_1 Pfam PF10404: BHD_2
Otu1p	SUPERFAMILY SSF54001: Cysteine proteinases	Pfam PF02338: OTU PANTHER PTHR13312:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13312: HIV-INDUCED PROTEIN-7-LIKE PROTEASE
Sad1p	SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH	SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z PANTHER PTHR24006:SF87: SUBFAMILY NOT NAMED Gene3D G3DSA:3.30.40.10: no description Pfam PF02148: zf-UBP
Ubp6p	PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH	PANTHER PTHR24006:SF121: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE SUPERFAMILY SSF54236: Ubiquitin-like Gene3D G3DSA:3.10.20.90: no description SMART SM00213: Ubiquitin homologues
Pan2p	SUPERFAMILY SSF54001: Cysteine proteinases	SUPERFAMILY SSF50978: WD40 repeat-like SUPERFAMILY SSF53098: Ribonuclease H-like Gene3D G3DSA:2.130.10.10: no description Gene3D G3DSA:3.30.420.10: no description Pfam PF13423: UCH_1 Pfam PF00929: RNase_T SMART SM00479: no description PANTHER PTHR15728:SF0: SUBFAMILY NOT NAMED PANTHER PTHR15728: UBIQUITIN SPECIFIC PROTEASE 52 / POLY(A) RIBONUCLEASE SUBUNIT PAN2
Otu2p	SUPERFAMILY SSF54001: Cysteine proteinases	Pfam PF02338: OTU PANTHER PTHR12419:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12419: OTU DOMAIN CONTAINING PROTEIN
Ulp2p	SUPERFAMILY SSF54001: Cysteine proteinases	Pfam PF02902: Peptidase_C48 Gene3D G3DSA:3.30.310.130: no description PANTHER PTHR12438:SF2: UBIQUITIN-LIKE PROTEASE PROTEIN 2 PANTHER PTHR12438: UBIQUITIN-LIKE PROTEASE PROTEIN 2
Ubp7p	Pfam PF00443: UCH PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR24006:SF43: SUBFAMILY NOT NAMED SUPERFAMILY SSF52821: Rhodanese/Cell cycle control phosphatase
Ubp12p	Pfam PF00443: UCH SUPERFAMILY SSF54001: Cysteine proteinases PANTHER PTHR24006: FAMILY NOT NAMED	SMART SM00695: Domain in ubiquitin-specific proteases. SUPERFAMILY SSF143791: DUSP-like Gene3D G3DSA:3.30.2230.10: no description PANTHER PTHR24006:SF39: SUBFAMILY NOT NAMED
Yuh1p	SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR10589:SF17: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE PANTHER PTHR10589: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE Gene3D G3DSA:3.40.532.10: no description PRINTS PR00707: UBCTHYDRLASE Pfam PF01088: Peptidase_C12
Ubp11p	PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH	PANTHER PTHR24006:SF43: SUBFAMILY NOT NAMED
Erg27p	SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR24316:SF33: SUBFAMILY NOT NAMED PANTHER PTHR24316: FAMILY NOT NAMED Gene3D G3DSA:3.40.50.720: no description SUPERFAMILY SSF51735: NAD(P)-binding Rossmann-fold domains
Rim13p	SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR10183:SF158: SUBFAMILY NOT NAMED PANTHER PTHR10183: CALPAIN Gene3D G3DSA:3.90.70.10: no description SMART SM00230: Calpain-like thiol protease family.
Ubp8p	PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH	SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z PANTHER PTHR24006:SF72: SUBFAMILY NOT NAMED Gene3D G3DSA:3.30.40.10: no description Pfam PF02148: zf-UBP
Ubp15p	PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR24006:SF89: SUBFAMILY NOT NAMED Gene3D G3DSA:2.20.210.10: no description Pfam PF00917: MATH Pfam PF12436: USP7 SUPERFAMILY SSF49599: TRAF domain-like SMART SM00061: meprin and TRAF homology
Ubp10p	PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH	PANTHER PTHR24006:SF72: SUBFAMILY NOT NAMED
Lap3p	SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR10363:SF2: BLEOMYCIN HYDROLASE PANTHER PTHR10363: BLEOMYCIN HYDROLASE Pfam PF03051: Peptidase_C1_2 Gene3D G3DSA:3.90.70.10: no description PIR superfamily PIRSF005700: Aminopeptidase C (bleomycin hydrolase)
Ulp1p	SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR12606:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12606: SENTRIN/SUMO-SPECIFIC PROTEASE Pfam PF02902: Peptidase_C48 Gene3D G3DSA:3.30.310.130: no description
Ubp16p	PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH SUPERFAMILY SSF54001: Cysteine proteinases	PANTHER PTHR24006:SF2: SUBFAMILY NOT NAMED
Png1p	SUPERFAMILY SSF54001: Cysteine proteinases	SMART SM00460: Transglutaminase/protease-like homologues PANTHER PTHR12143:SF2: PEPTIDE N-GLYCANASE (PNGASE) PANTHER PTHR12143: PEPTIDE N-GLYCANASE (PNGASE)-RELATED Pfam PF03835: Rad4

Unique domains/motifs

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This table lists domains/motifs that are unique to Ubp2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ubp2p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Ubp2p
Database source	Accession number	Description
PANTHER	PTHR24006:SF40	SUBFAMILY NOT NAMED
Pfam	PF13446	RPT

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Ubp2p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Ubp2p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Ubp2p .