TIR4/YOR009W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Tir4p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Tir4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tir4p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Tir4p
Protein	Motifs in common with Tir4p	Other motifs in this protein (but not in Tir4p )
Pau8p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau7p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau9p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Tip1p	Pfam PF00660: SRP1_TIP1	none
Pau24p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau3p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau10p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau2p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Tir1p	Pfam PF00660: SRP1_TIP1	Pfam PF00399: PIR
Pau5p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau11p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau12p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau13p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Tir3p	Pfam PF00660: SRP1_TIP1	none
Pau14p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau15p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau1p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Dan1p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Dan4p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau16p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau17p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau18p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau23p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Ylr040cp	Pfam PF00660: SRP1_TIP1	none
Pau4p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau19p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau6p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau20p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Tir2p	Pfam PF00660: SRP1_TIP1	Pfam PF00399: PIR
Pau21p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN
Pau22p	Pfam PF00660: SRP1_TIP1	PANTHER PTHR31002: SERIPAUPERIN

Unique domains/motifs

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This table lists domains/motifs that are unique to Tir4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tir4p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Tir4p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Tir4p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	1 - 22

External Links

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The following external links can be used to directly search external databases for domain/motif information for Tir4p .