BDS1/YOL164W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Bds1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Bds1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Bds1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Bds1p
Protein	Motifs in common with Bds1p	Other motifs in this protein (but not in Bds1p )
Glo2p	SMART SM00849: Metallo-beta-lactamase superfamily SUPERFAMILY SSF56281: Metallo-hydrolase/oxidoreductase Pfam PF00753: Lactamase_B Gene3D G3DSA:3.60.15.10: no description	PANTHER PTHR11935:SF7: HYDROXYACYLGLUTATHIONE HYDROLASE PANTHER PTHR11935: BETA LACTAMASE DOMAIN
Pde1p	SUPERFAMILY SSF56281: Metallo-hydrolase/oxidoreductase Gene3D G3DSA:3.60.15.10: no description	PIR superfamily PIRSF000962: 3',5'-cyclic-nucleotide phosphodiesterase PRINTS PR00388: PDIESTERASE2 Pfam PF02112: PDEase_II
Trz1p	Gene3D G3DSA:3.60.15.10: no description SUPERFAMILY SSF56281: Metallo-hydrolase/oxidoreductase	Pfam PF12706: Lactamase_B_2 Pfam PF13691: Lactamase_B_4 PANTHER PTHR12553:SF3: RIBONUCLEASE Z 2 PANTHER PTHR12553: RIBONUCLEASE Z
Cft2p	SUPERFAMILY SSF56281: Metallo-hydrolase/oxidoreductase Gene3D G3DSA:3.60.15.10: no description	Pfam PF13299: CPSF100_C Pfam PF10996: Beta-Casp PANTHER PTHR11203:SF3: GB DEF: L2946 PROTEIN (YDH1P: 105 KDA PROTEIN ASSOCIATED WITH POLYADENYLATION FACTOR 1) PANTHER PTHR11203: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SMART SM01027: Beta-Casp domain
Ysh1p	Pfam PF00753: Lactamase_B SUPERFAMILY SSF56281: Metallo-hydrolase/oxidoreductase SMART SM00849: Metallo-beta-lactamase superfamily Gene3D G3DSA:3.60.15.10: no description	Pfam PF11718: CPSF73-100_C Pfam PF10996: Beta-Casp Pfam PF07521: RMMBL SMART SM01027: Beta-Casp domain SMART SM01098: no description PANTHER PTHR11203:SF11: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR PANTHER PTHR11203: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR
Pso2p	SUPERFAMILY SSF56281: Metallo-hydrolase/oxidoreductase Gene3D G3DSA:3.60.15.10: no description	Pfam PF07522: DRMBL Pfam PF12706: Lactamase_B_2 PANTHER PTHR23240:SF4: DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1 PANTHER PTHR23240: DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
Glo4p	Gene3D G3DSA:3.60.15.10: no description SMART SM00849: Metallo-beta-lactamase superfamily Pfam PF00753: Lactamase_B SUPERFAMILY SSF56281: Metallo-hydrolase/oxidoreductase	PANTHER PTHR11935:SF7: HYDROXYACYLGLUTATHIONE HYDROLASE PANTHER PTHR11935: BETA LACTAMASE DOMAIN
Fmp30p	Gene3D G3DSA:3.60.15.10: no description SUPERFAMILY SSF56281: Metallo-hydrolase/oxidoreductase	Pfam PF12706: Lactamase_B_2 PANTHER PTHR32115:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32115: FAMILY NOT NAMED

Unique domains/motifs

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This table lists domains/motifs that are unique to Bds1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Bds1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Bds1p
Database source	Accession number	Description
Gene3D	G3DSA:3.30.1050.10	no description
PANTHER	PTHR30608	ALKYL/ARYL-SULFATASE-RELATED
PANTHER	PTHR30608:SF0	ALKYL/ARYL-SULFATASE
SUPERFAMILY	SSF55718	Sterol carrier protein, SCP

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Bds1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Bds1p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Bds1p .