INO4/YOL108C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ino4p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Ino4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ino4p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ino4p
Protein	Motifs in common with Ino4p	Other motifs in this protein (but not in Ino4p )
Rtg3p	SUPERFAMILY SSF47459: HLH, helix-loop-helix DNA-binding domain Gene3D G3DSA:4.10.280.10: no description SMART SM00353: helix loop helix domain	PANTHER PTHR10014:SF6: RETROGRADE REGULATION PROTEIN 3 PANTHER PTHR10014: BASIC HELIX-LOOP-HELIX/LEUCINE ZIPPER TRANSCRIPTION FACTOR Pfam PF00010: HLH
Ino2p	SMART SM00353: helix loop helix domain SUPERFAMILY SSF47459: HLH, helix-loop-helix DNA-binding domain	none
Pho4p	Gene3D G3DSA:4.10.280.10: no description SUPERFAMILY SSF47459: HLH, helix-loop-helix DNA-binding domain SMART SM00353: helix loop helix domain	PANTHER PTHR10985:SF40: ADL123CP PANTHER PTHR10985: BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED Pfam PF00010: HLH
Cbf1p	SUPERFAMILY SSF47459: HLH, helix-loop-helix DNA-binding domain Gene3D G3DSA:4.10.280.10: no description SMART SM00353: helix loop helix domain	Pfam PF00010: HLH PANTHER PTHR12565:SF27: CENTROMERE-BINDING PROTEIN 1 PANTHER PTHR12565: STEROL REGULATORY ELEMENT-BINDING PROTEIN
Rtg1p	Gene3D G3DSA:4.10.280.10: no description SMART SM00353: helix loop helix domain SUPERFAMILY SSF47459: HLH, helix-loop-helix DNA-binding domain	Pfam PF00010: HLH
Hms1p	Gene3D G3DSA:4.10.280.10: no description SUPERFAMILY SSF47459: HLH, helix-loop-helix DNA-binding domain SMART SM00353: helix loop helix domain	PANTHER PTHR12565:SF3: STEROL REGULATORY ELEMENT-BINDING PROTEIN PANTHER PTHR12565: STEROL REGULATORY ELEMENT-BINDING PROTEIN Pfam PF00010: HLH
Tye7p	Gene3D G3DSA:4.10.280.10: no description SMART SM00353: helix loop helix domain SUPERFAMILY SSF47459: HLH, helix-loop-helix DNA-binding domain	Pfam PF00010: HLH PANTHER PTHR12565:SF17: SERINE-RICH PROTEIN TYE7 PANTHER PTHR12565: STEROL REGULATORY ELEMENT-BINDING PROTEIN

Unique domains/motifs

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This table lists domains/motifs that are unique to Ino4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ino4p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Ino4p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Ino4p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Ino4p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Ino4p .