YPQ1/YOL092W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ypq1p domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Ypq1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ypq1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ypq1p
Protein	Motifs in common with Ypq1p	Other motifs in this protein (but not in Ypq1p )
Rtc2p	SMART SM00679: Repeated motif present between transmembrane PANTHER PTHR16201:SF6: SUBFAMILY NOT NAMED PANTHER PTHR16201: FAMILY NOT NAMED Pfam PF04193: PQ-loop	none
Ers1p	SMART SM00679: Repeated motif present between transmembrane Pfam PF04193: PQ-loop	TIGRFAMs TIGR00951: 2A43: lysosomal Cystine Transporter PANTHER PTHR13131: CYSTINOSIN
Ydr090cp	SMART SM00679: Repeated motif present between transmembrane PANTHER PTHR16201: FAMILY NOT NAMED Pfam PF04193: PQ-loop	PANTHER PTHR16201:SF13: UNCHARACTERIZED MEMBRANE PROTEIN YDR090C
Ypq2p	SMART SM00679: Repeated motif present between transmembrane Pfam PF04193: PQ-loop PANTHER PTHR16201: FAMILY NOT NAMED	PANTHER PTHR16201:SF3: SUBFAMILY NOT NAMED
Ymr010wp	Pfam PF04193: PQ-loop	PANTHER PTHR14856:SF3: GB DEF: HYPOTHETICAL 46.9 KDA PROTEIN IN PLB1-HXT2 INTERGENIC REGION PANTHER PTHR14856: FAMILY NOT NAMED

Unique domains/motifs

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This table lists domains/motifs that are unique to Ypq1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ypq1p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Ypq1p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	15 - 37
	44 - 66
	71 - 93
	168 - 186
	206 - 225
	245 - 267
	277 - 299

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Ypq1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Ypq1p .