PRE6/YOL038W Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Pre6p domain/motif information see the external links section.


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Shared domains/motifs


This table lists proteins that share domains/motifs in common with those found in Pre6p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pre6p domain/motif information see the external links section.

Last updated on 2013-12-16

Other Saccharomyces cerevisiae proteins that contain motifs found in Pre6p
Protein Motifs in common with Pre6p Other motifs in this protein (but not in Pre6p )
Pre7p PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
Gene3D G3DSA:3.60.20.10: no description
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Pfam PF00227: Proteasome
PANTHER PTHR11599:SF8: PROTEASOME SUBUNIT BETA TYPE 1
Glt1p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
PIR superfamily PIRSF000187: Glutamate synthase (NADH/NADPH), eukaryotic type
PRINTS PR00419: ADXRDTASE
PANTHER PTHR11938:SF1: GLUTAMATE SYNTHASE
PANTHER PTHR11938: FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE
TIGRFAMs TIGR01317: GOGAT_sm_gam: glutamate synthase, NADH/NADPH, smal
SUPERFAMILY SSF51395: FMN-linked oxidoreductases
SUPERFAMILY SSF69336: Alpha subunit of glutamate synthase, C-terminal domain
SUPERFAMILY SSF51971: Nucleotide-binding domain
SUPERFAMILY SSF46548: alpha-helical ferredoxin
Gene3D G3DSA:3.20.20.70: no description
Gene3D G3DSA:2.160.20.60: no description
Gene3D G3DSA:1.10.1060.10: no description
Gene3D G3DSA:3.40.50.720: no description
Gene3D G3DSA:3.50.50.60: no description
Pfam PF01645: Glu_synthase
Pfam PF00310: GATase_2
Pfam PF04898: Glu_syn_central
Pfam PF01493: GXGXG
Pfam PF14691: Fer4_20
Pfam PF07992: Pyr_redox_2
Pre1p PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
Gene3D G3DSA:3.60.20.10: no description
Pfam PF00227: Proteasome
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PANTHER PTHR11599:SF6: PROTEASOME SUBUNIT BETA TYPE 2
Pup3p PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
Gene3D G3DSA:3.60.20.10: no description
Pfam PF00227: Proteasome
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PANTHER PTHR11599:SF7: PROTEASOME SUBUNIT BETA TYPE 3
Pre4p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
Pfam PF00227: Proteasome
PIR superfamily PIRSF001213: Proteasome endopeptidase complex, beta subunit
PANTHER PTHR11599:SF5: PROTEASOME SUBUNIT BETA TYPE 4
Scl1p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
Pfam PF00227: Proteasome
Pfam PF10584: Proteasome_A_N
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
SMART SM00948: Proteasome subunit A N-terminal signat
PANTHER PTHR11599:SF11: PROTEASOME SUBUNIT ALPHA TYPE 6
Asn2p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like
PANTHER PTHR11772: ASPARAGINE SYNTHETASE
Pfam PF00733: Asn_synthase
Pfam PF13537: GATase_7
Gene3D G3DSA:3.40.50.620: no description
TIGRFAMs TIGR01536: asn_synth_AEB: asparagine synthase (glutamine-hydr
Pre9p Gene3D G3DSA:3.60.20.10: no description
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
SMART SM00948: Proteasome subunit A N-terminal signat
Pfam PF00227: Proteasome
Pfam PF10584: Proteasome_A_N
PANTHER PTHR11599:SF13: PROTEASOME SUBUNIT ALPHA TYPE 4
Pup2p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SMART SM00948: Proteasome subunit A N-terminal signat
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
Gene3D G3DSA:3.60.20.10: no description
Pfam PF00227: Proteasome
Pfam PF10584: Proteasome_A_N
PANTHER PTHR11599:SF14: PROTEASOME SUBUNIT ALPHA TYPE 5
Pre3p PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
Gene3D G3DSA:3.60.20.10: no description
Pfam PF00227: Proteasome
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PRINTS PR00141: PROTEASOME
PANTHER PTHR11599:SF4: PROTEASOME SUBUNIT BETA TYPE 6,9
Gfa1p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
SUPERFAMILY SSF53697: SIS domain
Gene3D G3DSA:3.40.50.10490: no description
PANTHER PTHR10937:SF0: GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING
PANTHER PTHR10937: GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING
Pfam PF01380: SIS
Pfam PF00310: GATase_2
Ecm38p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PANTHER PTHR11686: GAMMA GLUTAMYL TRANSPEPTIDASES
TIGRFAMs TIGR00066: g_glut_trans: gamma-glutamyltransferase
Pfam PF01019: G_glu_transpept
PRINTS PR01210: GGTRANSPTASE
Pre8p Pfam PF00227: Proteasome
Pfam PF10584: Proteasome_A_N
Gene3D G3DSA:3.60.20.10: no description
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SMART SM00948: Proteasome subunit A N-terminal signat
PANTHER PTHR11599:SF16: PROTEASOME SUBUNIT ALPHA TYPE 2
Yml096wp SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like
Pfam PF00733: Asn_synthase
Pfam PF13537: GATase_7
PANTHER PTHR11772: ASPARAGINE SYNTHETASE
Gene3D G3DSA:3.40.50.620: no description
Ymr084wp Gene3D G3DSA:3.60.20.10: G3DSA:3.60.20.10
SUPERFAMILY SSF56235: SSF56235
PANTHER PTHR10937: PTHR10937
PANTHER PTHR10937:SF0: PTHR10937:SF0
PROSITE PS51278: GATASE_TYPE_2
Pfam PF13522: GATase_6
Ade4p Gene3D G3DSA:3.60.20.10: no description
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PANTHER PTHR11907:SF0: SUBFAMILY NOT NAMED
PANTHER PTHR11907: AMIDOPHOSPHORIBOSYLTRANSFERASE
Gene3D G3DSA:3.40.50.2020: no description
SUPERFAMILY SSF53271: PRTase-like
PIR superfamily PIRSF000485: Amidophosphoribosyltransferase
Pfam PF00310: GATase_2
Pfam PF00156: Pribosyltran
TIGRFAMs TIGR01134: purF: amidophosphoribosyltransferase
Pre5p Gene3D G3DSA:3.60.20.10: no description
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Pfam PF00227: Proteasome
Pfam PF10584: Proteasome_A_N
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
SMART SM00948: Proteasome subunit A N-terminal signat
PANTHER PTHR11599:SF12: PROTEASOME SUBUNIT ALPHA TYPE 1
Dug3p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
PANTHER PTHR11907: AMIDOPHOSPHORIBOSYLTRANSFERASE
Pfam PF13230: GATase_4
Pup1p Pfam PF00227: Proteasome
Gene3D G3DSA:3.60.20.10: no description
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Pfam PF12465: Pr_beta_C
PRINTS PR00141: PROTEASOME
PANTHER PTHR11599:SF1: PROTEASOME SUBUNIT BETA TYPE 7,10
Pre10p Pfam PF00227: Proteasome
Pfam PF10584: Proteasome_A_N
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
Gene3D G3DSA:3.60.20.10: no description
SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SMART SM00948: Proteasome subunit A N-terminal signat
PANTHER PTHR11599:SF10: PROTEASOME SUBUNIT ALPHA TYPE 3
Pre2p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
PANTHER PTHR11599: PROTEASOME SUBUNIT ALPHA/BETA
Pfam PF00227: Proteasome
PANTHER PTHR11599:SF3: PROTEASOME SUBUNIT BETA TYPE 5,8
PRINTS PR00141: PROTEASOME
Asn1p SUPERFAMILY SSF56235: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Gene3D G3DSA:3.60.20.10: no description
PANTHER PTHR11772: ASPARAGINE SYNTHETASE
SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like
Pfam PF00733: Asn_synthase
Pfam PF13537: GATase_7
TIGRFAMs TIGR01536: asn_synth_AEB: asparagine synthase (glutamine-hydr
Gene3D G3DSA:3.40.50.620: no description

Unique domains/motifs


This table lists domains/motifs that are unique to Pre6p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Pre6p domain/motif information see the external links section.

Last updated on 2013-12-16

Domain/motifs that are unique to Pre6p
Database source Accession number Description
PANTHER PTHR11599:SF15 PROTEASOME SUBUNIT ALPHA TYPE 7

Transmembrane Domains


This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Pre6p .

Signal Peptide(s)


This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Pre6p .


The following external links can be used to directly search external databases for domain/motif information for Pre6p .