DIS3/YOL021C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Dis3p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Dis3p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Dis3p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Dis3p
Protein	Motifs in common with Dis3p	Other motifs in this protein (but not in Dis3p )
Din7p	Gene3D G3DSA:3.40.50.1010: no description SUPERFAMILY SSF88723: PIN domain-like	PRINTS PR00853: XPGRADSUPER Gene3D G3DSA:1.10.150.20: no description PANTHER PTHR11081:SF8: EXONUCLEASE 1 PANTHER PTHR11081: XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY SUPERFAMILY SSF47807: 5' to 3' exonuclease, C-terminal subdomain Pfam PF00752: XPG_N Pfam PF00867: XPG_I SMART SM00485: Xeroderma pigmentosum G N-region SMART SM00484: Xeroderma pigmentosum G I-region SMART SM00279: Helix-hairpin-helix class 2 (Pol1 family) mo
Ssd1p	SMART SM00955: no description Pfam PF00773: RNB PANTHER PTHR23355: RIBONUCLEASE	PANTHER PTHR23355:SF8: SSD1 PROTEIN (SRK1 PROTEIN)
Fcf1p	SUPERFAMILY SSF88723: PIN domain-like SMART SM00670: Large family of predicted nucleotide-binding Gene3D G3DSA:3.40.50.1010: no description	Pfam PF04900: Fcf1 PANTHER PTHR12416: UNCHARACTERIZED
Rpb7p	SMART SM00316: Ribosomal protein S1-like RNA-binding domain	Gene3D G3DSA:3.30.1490.120: no description Gene3D G3DSA:2.40.50.140: no description Pfam PF03876: SHS2_Rpb7-N Pfam PF00575: S1 SUPERFAMILY SSF88798: N-terminal, heterodimerisation domain of RBP7 (RpoE) SUPERFAMILY SSF50249: Nucleic acid-binding proteins PANTHER PTHR12709: DNA-DIRECTED RNA POLYMERASE II, III
Prp22p	SMART SM00316: Ribosomal protein S1-like RNA-binding domain	Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:3.40.50.300: no description SMART SM00487: DEAD-like helicases superfamily SMART SM00490: helicase superfamily c-terminal domain SMART SM00847: Helicase associated domain (HA2) Add an ann Pfam PF07717: OB_NTP_bind Pfam PF04408: HA2 Pfam PF00575: S1 Pfam PF00271: Helicase_C PANTHER PTHR18934: ATP-DEPENDENT RNA HELICASE SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SUPERFAMILY SSF50249: Nucleic acid-binding proteins
Yen1p	Gene3D G3DSA:3.40.50.1010: no description SUPERFAMILY SSF88723: PIN domain-like	SMART SM00485: Xeroderma pigmentosum G N-region SMART SM00484: Xeroderma pigmentosum G I-region PANTHER PTHR11081:SF12: NUCLEASE PANTHER PTHR11081: XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY SUPERFAMILY SSF47807: 5' to 3' exonuclease, C-terminal subdomain Pfam PF00867: XPG_I PRINTS PR00853: XPGRADSUPER
Rad2p	Gene3D G3DSA:3.40.50.1010: no description SUPERFAMILY SSF88723: PIN domain-like	Pfam PF00752: XPG_N Pfam PF00867: XPG_I Gene3D G3DSA:1.10.150.20: no description PRINTS PR00853: XPGRADSUPER PRINTS PR00066: XRODRMPGMNTG PANTHER PTHR11081:SF13: DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS XERODERMA PIGMENTOSUM GROUP G-COMPL PANTHER PTHR11081: XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY SUPERFAMILY SSF47807: 5' to 3' exonuclease, C-terminal subdomain SMART SM00485: Xeroderma pigmentosum G N-region SMART SM00484: Xeroderma pigmentosum G I-region SMART SM00279: Helix-hairpin-helix class 2 (Pol1 family) mo TIGRFAMs TIGR00600: rad2: DNA excision repair protein (rad2)
Yil151cp	Pfam PF13638: PIN_4 SMART SM00670: Large family of predicted nucleotide-binding	SUPERFAMILY SSF48452: TPR-like
Sui2p	SMART SM00316: Ribosomal protein S1-like RNA-binding domain	Pfam PF07541: EIF_2_alpha Pfam PF00575: S1 SUPERFAMILY SSF110993: eIF-2-alpha, C-terminal domain SUPERFAMILY SSF116742: eIF2alpha middle domain-like SUPERFAMILY SSF50249: Nucleic acid-binding proteins Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:1.10.150.190: no description Gene3D G3DSA:3.30.70.1130: no description PANTHER PTHR10602:SF0: EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PANTHER PTHR10602: EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1
Rad27p	Gene3D G3DSA:3.40.50.1010: no description SUPERFAMILY SSF88723: PIN domain-like	Pfam PF00752: XPG_N Pfam PF00867: XPG_I SMART SM00485: Xeroderma pigmentosum G N-region SMART SM00484: Xeroderma pigmentosum G I-region SMART SM00279: Helix-hairpin-helix class 2 (Pol1 family) mo PRINTS PR00853: XPGRADSUPER PANTHER PTHR11081:SF9: FLAP ENDONUCLEASE-1 PANTHER PTHR11081: XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY Gene3D G3DSA:1.10.150.20: no description SUPERFAMILY SSF47807: 5' to 3' exonuclease, C-terminal subdomain
Esl2p	Pfam PF13638: PIN_4 SMART SM00670: Large family of predicted nucleotide-binding	SUPERFAMILY SSF48452: TPR-like PANTHER PTHR11584:SF227: SUBFAMILY NOT NAMED PANTHER PTHR11584: SERINE/THREONINE PROTEIN KINASE
Nmd4p	Gene3D G3DSA:3.40.50.1010: no description SMART SM00670: Large family of predicted nucleotide-binding	ProDom PD112888: NMD4_YEAST_Q12129;
Rrp5p	SMART SM00316: Ribosomal protein S1-like RNA-binding domain	PANTHER PTHR23270:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23270: PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5) SMART SM00386: HAT (Half-A-TPR) repeats SUPERFAMILY SSF50249: Nucleic acid-binding proteins SUPERFAMILY SSF48452: TPR-like Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:1.25.40.10: no description Pfam PF00575: S1
Dss1p	SMART SM00955: no description PANTHER PTHR23355: RIBONUCLEASE Pfam PF00773: RNB	PANTHER PTHR23355:SF3: MITOCHONDRIAL BIOGENESIS MSU1
Mkt1p	Gene3D G3DSA:3.40.50.1010: no description SUPERFAMILY SSF88723: PIN domain-like	PANTHER PTHR32221:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32221: FAMILY NOT NAMED Pfam PF12246: MKT1_C Pfam PF12247: MKT1_N Pfam PF00752: XPG_N Pfam PF00867: XPG_I SMART SM00485: Xeroderma pigmentosum G N-region SMART SM00484: Xeroderma pigmentosum G I-region
Utp23p	SUPERFAMILY SSF88723: PIN domain-like Gene3D G3DSA:3.40.50.1010: no description	Pfam PF04900: Fcf1 PANTHER PTHR12416: UNCHARACTERIZED
Exo1p	Gene3D G3DSA:3.40.50.1010: no description SUPERFAMILY SSF88723: PIN domain-like	SMART SM00485: Xeroderma pigmentosum G N-region SMART SM00484: Xeroderma pigmentosum G I-region SMART SM00279: Helix-hairpin-helix class 2 (Pol1 family) mo Pfam PF00752: XPG_N Pfam PF00867: XPG_I PANTHER PTHR11081:SF8: EXONUCLEASE 1 PANTHER PTHR11081: XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY PRINTS PR00853: XPGRADSUPER Gene3D G3DSA:1.10.150.20: no description SUPERFAMILY SSF47807: 5' to 3' exonuclease, C-terminal subdomain
Nob1p	SMART SM00670: Large family of predicted nucleotide-binding	SUPERFAMILY SSF144206: NOB1 zinc finger-like PIR superfamily PIRSF037125: D-site 20S pre-rRNA nuclease PANTHER PTHR12814: RNA-BINDING PROTEIN NOB1 Pfam PF08772: NOB1_Zn_bind
Swt1p	Gene3D G3DSA:3.40.50.1010: no description SMART SM00670: Large family of predicted nucleotide-binding Pfam PF13638: PIN_4 SUPERFAMILY SSF88723: PIN domain-like	PANTHER PTHR16161:SF0: SUBFAMILY NOT NAMED PANTHER PTHR16161: UNCHARACTERIZED

Unique domains/motifs

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This table lists domains/motifs that are unique to Dis3p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Dis3p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Dis3p
Database source	Accession number	Description
PANTHER	PTHR23355:SF13	MITOTIC CONTROL PROTEIN DIS3

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Dis3p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Dis3p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Dis3p .