YNL234W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ynl234wp domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Ynl234wp , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ynl234wp domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ynl234wp
Protein	Motifs in common with Ynl234wp	Other motifs in this protein (but not in Ynl234wp )
Yhb1p	Gene3D G3DSA:1.10.490.10: no description Pfam PF00042: Globin SUPERFAMILY SSF46458: Globin-like PANTHER PTHR22924: LEGHEMOGLOBIN-RELATED	Gene3D G3DSA:2.40.30.10: no description Gene3D G3DSA:3.40.50.80: no description Pfam PF00970: FAD_binding_6 Pfam PF00175: NAD_binding_1 SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain SUPERFAMILY SSF63380: Riboflavin synthase domain-like

Unique domains/motifs

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This table lists domains/motifs that are unique to Ynl234wp . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ynl234wp domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Ynl234wp .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Ynl234wp .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Ynl234wp .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Ynl234wp .