YNL194C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ynl194cp domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Ynl194cp , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ynl194cp domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ynl194cp
Protein	Motifs in common with Ynl194cp	Other motifs in this protein (but not in Ynl194cp )
Fmp45p	Pfam PF06687: SUR7	none
Dcv1p	Pfam PF06687: SUR7	none
Fat3p	Pfam PF06687: SUR7	Gene3D G3DSA:1.25.10.10: no description
Ylr413wp	Pfam PF06687: SUR7	none
Pun1p	Pfam PF06687: SUR7	none
Ecm7p	Pfam PF06687: SUR7	none
Sur7p	Pfam PF06687: SUR7	none
Rim9p	Pfam PF06687: SUR7	none
Yol019wp	Pfam PF06687: SUR7	none

Unique domains/motifs

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This table lists domains/motifs that are unique to Ynl194cp . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ynl194cp domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Ynl194cp .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	7 - 29
	113 - 135
	148 - 170
	190 - 212

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	1 - 30

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Ynl194cp .