IDH1/YNL037C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Idh1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Idh1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Idh1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Idh1p
Protein	Motifs in common with Idh1p	Other motifs in this protein (but not in Idh1p )
Leu2p	PANTHER PTHR11835: DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE SUPERFAMILY SSF53659: Isocitrate/Isopropylmalate dehydrogenase-like Pfam PF00180: Iso_dh Gene3D G3DSA:3.40.718.10: no description	PANTHER PTHR11835:SF1: ISOCITRATE DEHYDROGNENASE TIGRFAMs TIGR00169: leuB: 3-isopropylmalate dehydrogenase
Idp1p	Gene3D G3DSA:3.40.718.10: no description SUPERFAMILY SSF53659: Isocitrate/Isopropylmalate dehydrogenase-like Pfam PF00180: Iso_dh	PANTHER PTHR11822: NADP-SPECIFIC ISOCITRATE DEHYDROGENASE PIR superfamily PIRSF000108: Isocitrate dehydrogenase (NADP) TIGRFAMs TIGR00127: nadp_idh_euk: isocitrate dehydrogenase, NADP-depen
Lys12p	Gene3D G3DSA:3.40.718.10: no description Pfam PF00180: Iso_dh SUPERFAMILY SSF53659: Isocitrate/Isopropylmalate dehydrogenase-like PANTHER PTHR11835: DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE	PANTHER PTHR11835:SF31: HOMOISOCITRATE DEHYDROGENASE, MITOCHONDRIAL
Idp2p	Gene3D G3DSA:3.40.718.10: no description SUPERFAMILY SSF53659: Isocitrate/Isopropylmalate dehydrogenase-like Pfam PF00180: Iso_dh	PANTHER PTHR11822: NADP-SPECIFIC ISOCITRATE DEHYDROGENASE PIR superfamily PIRSF000108: Isocitrate dehydrogenase (NADP) TIGRFAMs TIGR00127: nadp_idh_euk: isocitrate dehydrogenase, NADP-depen
Idp3p	SUPERFAMILY SSF53659: Isocitrate/Isopropylmalate dehydrogenase-like Pfam PF00180: Iso_dh Gene3D G3DSA:3.40.718.10: no description	PANTHER PTHR11822: NADP-SPECIFIC ISOCITRATE DEHYDROGENASE TIGRFAMs TIGR00127: nadp_idh_euk: isocitrate dehydrogenase, NADP-depen PIR superfamily PIRSF000108: Isocitrate dehydrogenase (NADP)
Idh2p	Gene3D G3DSA:3.40.718.10: no description Pfam PF00180: Iso_dh PANTHER PTHR11835: DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE SUPERFAMILY SSF53659: Isocitrate/Isopropylmalate dehydrogenase-like TIGRFAMs TIGR00175: mito_nad_idh: isocitrate dehydrogenase, NAD-depend	PANTHER PTHR11835:SF30: ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT 2, MITOCHONDRIAL

Unique domains/motifs

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This table lists domains/motifs that are unique to Idh1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Idh1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Idh1p
Database source	Accession number	Description
PANTHER	PTHR11835:SF29	ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT 1, MITOCHONDRIAL

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Idh1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Idh1p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Idh1p .