SNO4/YMR322C Domains/Motifs and Signal Peptides 
To directly search external databases for Sno4p domain/motif information see the external links section.
| Click on image for expanded interactive view |
|---|
This table lists proteins that share domains/motifs in common with those found in Sno4p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Sno4p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Sno4p | ||
|---|---|---|
| Protein | Motifs in common with Sno4p | Other motifs in this protein (but not in Sno4p ) |
| Ura7p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
Pfam PF06418: CTP_synth_N Pfam PF00117: GATase PANTHER PTHR11550:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11550: CTP SYNTHASE SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases TIGRFAMs TIGR00337: PyrG: CTP synthase Gene3D G3DSA:3.40.50.300: no description |
| His7p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel TIGRFAMs TIGR00735: hisF: imidazoleglycerol phosphate synthase, cyclas TIGRFAMs TIGR01855: IMP_synth_hisH: imidazole glycerol phosphate synth Pfam PF00977: His_biosynth Pfam PF00117: GATase PANTHER PTHR21235:SF2: IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF (IGP SYNTHASE SUBUNIT HISF) PANTHER PTHR21235: IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H (IGP SYNTHASE SUBUNIT HISF/H) Gene3D G3DSA:3.20.20.70: no description PIR superfamily PIRSF036936: Imidazole glycerol phosphate synthase HisHF |
| Bpl1p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
SUPERFAMILY SSF55681: Class II aaRS and biotin synthetases Pfam PF09825: BPL_N Pfam PF03099: BPL_LplA_LipB Pfam PF02237: BPL_C Gene3D G3DSA:3.30.930.10: no description PANTHER PTHR12835:SF4: SUBFAMILY NOT NAMED PANTHER PTHR12835: BIOTIN PROTEIN LIGASE |
| Hsp31p | PANTHER PTHR31732: FAMILY NOT NAMED Gene3D G3DSA:3.40.50.880: no description SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Pfam PF01965: DJ-1_PfpI |
Pfam PF13587: DJ-1_PfpI_N |
| Sno3p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
Pfam PF01174: SNO PIR superfamily PIRSF005639: Glutamine amidotransferase, SNO type PANTHER PTHR31559:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31559: FAMILY NOT NAMED TIGRFAMs TIGR03800: PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, g |
| Ade6p | Gene3D G3DSA:3.40.50.880: no description SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like |
Pfam PF13507: GATase_5 Pfam PF02769: AIRS_C Pfam PF00586: AIRS Gene3D G3DSA:3.30.1330.10: no description SUPERFAMILY SSF56042: PurM C-terminal domain-like SUPERFAMILY SSF55326: PurM N-terminal domain-like SUPERFAMILY SSF82697: PurS-like SUPERFAMILY SSF109736: FGAM synthase PurL, linker domain TIGRFAMs TIGR01735: FGAM_synt: phosphoribosylformylglycinamidine synth PANTHER PTHR10099: PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE |
| Ura2p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
Pfam PF02786: CPSase_L_D2 Pfam PF00988: CPSase_sm_chain Pfam PF00117: GATase Pfam PF02729: OTCace_N Pfam PF02787: CPSase_L_D3 Pfam PF00289: CPSase_L_chain Pfam PF00185: OTCace Pfam PF02142: MGS PANTHER PTHR11405:SF3: CARBAMOYL-PHOSPHATE SYNTHASE LARGE CHAIN PANTHER PTHR11405: CARBAMOYLTRANSFERASE RELATED PRINTS PR00098: CPSASE PRINTS PR00099: CPSGATASE PRINTS PR00101: ATCASE PRINTS PR00100: AOTCASE SUPERFAMILY SSF56059: Glutathione synthetase ATP-binding domain-like SUPERFAMILY SSF53671: Aspartate/ornithine carbamoyltransferase SUPERFAMILY SSF48108: Carbamoyl phosphate synthetase, large subunit connection domain SUPERFAMILY SSF52440: PreATP-grasp domain SUPERFAMILY SSF52021: Carbamoyl phosphate synthetase, small subunit N-terminal domain SUPERFAMILY SSF52335: Methylglyoxal synthase-like SUPERFAMILY SSF51556: Metallo-dependent hydrolases TIGRFAMs TIGR01369: CPSaseII_lrg: carbamoyl-phosphate synthase, large TIGRFAMs TIGR01368: CPSaseIIsmall: carbamoyl-phosphate synthase, small TIGRFAMs TIGR00670: asp_carb_tr: aspartate carbamoyltransferase SMART SM01097: Carbamoyl-phosphate synthase small ch SMART SM01096: Carbamoyl-phosphate synthetase large SMART SM00851: MGS-like domain Gene3D G3DSA:3.50.30.20: no description Gene3D G3DSA:3.40.50.20: no description Gene3D G3DSA:3.30.1490.20: no description Gene3D G3DSA:3.30.470.20: no description Gene3D G3DSA:1.10.1030.10: no description Gene3D G3DSA:3.40.50.1380: no description Gene3D G3DSA:3.20.20.140: no description Gene3D G3DSA:3.40.50.1370: no description |
| Ura8p | Gene3D G3DSA:3.40.50.880: no description SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like |
TIGRFAMs TIGR00337: PyrG: CTP synthase Pfam PF06418: CTP_synth_N Pfam PF00117: GATase PANTHER PTHR11550:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11550: CTP SYNTHASE Gene3D G3DSA:3.40.50.300: no description SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases |
| Trp3p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
PRINTS PR00097: ANTSNTHASEII PRINTS PR00096: GATASE PRINTS PR00099: CPSGATASE SUPERFAMILY SSF51366: Ribulose-phoshate binding barrel TIGRFAMs TIGR00566: trpG_papA: glutamine amidotransferase of anthranil Gene3D G3DSA:3.20.20.70: no description Pfam PF00218: IGPS Pfam PF00117: GATase PANTHER PTHR11922:SF3: ANTHRANILATE SYNTHASE COMPONENT II PANTHER PTHR11922: GMP SYNTHASE-RELATED |
| Ylr126cp | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
PANTHER PTHR11922:SF14: GLUTAMINE AMIDOTRANSFERASE CLASS-I FAMILY PROTEIN PANTHER PTHR11922: GMP SYNTHASE-RELATED Pfam PF00117: GATase |
| Sno1p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
PANTHER PTHR31559:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31559: FAMILY NOT NAMED TIGRFAMs TIGR03800: PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, g PIR superfamily PIRSF005639: Glutamine amidotransferase, SNO type Pfam PF01174: SNO |
| Gua1p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
TIGRFAMs TIGR00884: guaA_Cterm: GMP synthase (glutamine-hydrolyzing), TIGRFAMs TIGR00888: guaA_Nterm: GMP synthase (glutamine-hydrolyzing), SUPERFAMILY SSF52402: Adenine nucleotide alpha hydrolases-like Gene3D G3DSA:3.40.50.620: no description Gene3D G3DSA:3.30.300.10: no description PRINTS PR00096: GATASE PRINTS PR00097: ANTSNTHASEII Pfam PF00117: GATase Pfam PF00958: GMP_synt_C Pfam PF02540: NAD_synthase PANTHER PTHR11922:SF2: GMP SYNTHASE PANTHER PTHR11922: GMP SYNTHASE-RELATED |
| Sno2p | Gene3D G3DSA:3.40.50.880: no description SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like |
PIR superfamily PIRSF005639: Glutamine amidotransferase, SNO type Pfam PF01174: SNO TIGRFAMs TIGR03800: PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, g PANTHER PTHR31559:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31559: FAMILY NOT NAMED |
| Abz1p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description |
SUPERFAMILY SSF56322: ADC synthase TIGRFAMs TIGR01823: PabB-fungal: aminodeoxychorismate synthase TIGRFAMs TIGR00566: trpG_papA: glutamine amidotransferase of anthranil PANTHER PTHR11236:SF6: P-AMINOBENZOATE SYNTHASE PANTHER PTHR11236: AMINOBENZOATE/ANTHRANILATE SYNTHASE PRINTS PR00097: ANTSNTHASEII PRINTS PR00096: GATASE Pfam PF00425: Chorismate_bind Pfam PF00117: GATase Pfam PF04715: Anth_synt_I_N Gene3D G3DSA:3.60.120.10: no description |
| Cpa1p | Gene3D G3DSA:3.40.50.880: no description SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like |
Pfam PF00117: GATase Pfam PF00988: CPSase_sm_chain Gene3D G3DSA:3.50.30.20: no description TIGRFAMs TIGR01368: CPSaseIIsmall: carbamoyl-phosphate synthase, small SMART SM01097: Carbamoyl-phosphate synthase small ch PRINTS PR00099: CPSGATASE PRINTS PR00096: GATASE PANTHER PTHR11405: CARBAMOYLTRANSFERASE RELATED SUPERFAMILY SSF52021: Carbamoyl phosphate synthetase, small subunit N-terminal domain |
| Hsp33p | SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like Gene3D G3DSA:3.40.50.880: no description PANTHER PTHR31732: FAMILY NOT NAMED Pfam PF01965: DJ-1_PfpI |
none |
| Hsp32p | Pfam PF01965: DJ-1_PfpI Gene3D G3DSA:3.40.50.880: no description SUPERFAMILY SSF52317: Class I glutamine amidotransferase-like PANTHER PTHR31732: FAMILY NOT NAMED |
none |
This table lists domains/motifs that are unique to Sno4p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Sno4p domain/motif information see the external links section.
Last updated on 2013-05-06
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Sno4p .
