RKR1/YMR247C Domains/Motifs and Signal Peptides 
To directly search external databases for Rkr1p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Rkr1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rkr1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Rkr1p | ||
|---|---|---|
| Protein | Motifs in common with Rkr1p | Other motifs in this protein (but not in Rkr1p ) |
| Vps8p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
Gene3D G3DSA:2.130.10.10: no description PANTHER PTHR31202:SF0: SUBFAMILY NOT NAMED PANTHER PTHR31202: FAMILY NOT NAMED SUPERFAMILY SSF50978: WD40 repeat-like Pfam PF12816: Vps8 |
| Tpd3p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF13646: HEAT_2 PANTHER PTHR10648:SF4: SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT PANTHER PTHR10648: SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT Gene3D G3DSA:1.25.10.10: no description |
| Utp20p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF07539: DRIM Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR17695:SF11: SUBFAMILY NOT NAMED PANTHER PTHR17695: UNCHARACTERIZED |
| Stu1p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF12348: CLASP_N PANTHER PTHR21567:SF4: GB DEF: MITOTIC SPINDLE PROTEIN STU1 PANTHER PTHR21567: CLASP |
| Apl3p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:2.60.40.1030: no description Gene3D G3DSA:3.30.310.30: no description SUPERFAMILY SSF49348: Clathrin adaptor appendage domain SUPERFAMILY SSF55711: Subdomain of clathrin and coatomer appendage domain PANTHER PTHR22780:SF3: GB DEF: PROBABLE ALPHA-ADAPTIN (CLATHRIN ASSEMBLY PROTEIN LARGE ALPHA CHAIN) (CLATHRIN A PANTHER PTHR22780: ADAPTIN, ALPHA/GAMMA/EPSILON PIR superfamily PIRSF037091: Adaptor protein complex AP-2, alpha subunit SMART SM00809: Adaptin C-terminal domain Pfam PF01602: Adaptin_N Pfam PF02883: Alpha_adaptinC2 |
| Sea4p | Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR16453:SF11: WD REPEAT-CONTAINING PROTEIN YBL104C PANTHER PTHR16453: WD40 DOMAIN-CONTAINING PROTEIN SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description |
| Kap104p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR10527:SF3: TRANSPORTIN-1 (IMPORTIN BETA-2)(KARYOPHERIN BETA-2) PANTHER PTHR10527: IMPORTIN BETA Pfam PF13513: HEAT_EZ |
| Ubp14p | Gene3D G3DSA:3.30.40.10: no description |
SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z SMART SM00165: Ubiquitin associated domain Gene3D G3DSA:1.10.8.10: no description PIR superfamily PIRSF016308: Ubiquitin-specific protease (ubiquitin carboxyl-terminal hydrolase) SUPERFAMILY SSF54001: Cysteine proteinases SUPERFAMILY SSF46934: UBA-like PANTHER PTHR24006:SF175: HYPOTHETICAL PROTEIN PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF00443: UCH Pfam PF02148: zf-UBP Pfam PF00627: UBA |
| Ybr062cp | Gene3D G3DSA:3.30.40.10: no description Pfam PF13639: zf-RING_2 SUPERFAMILY SSF57850: RING/U-box |
SMART SM00184: Ring finger |
| Vps15p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR17583: PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 Pfam PF00069: Pkinase SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF50978: WD40 repeat-like SMART SM00219: Tyrosine kinase, catalytic domain SMART SM00220: Serine/Threonine protein kinases, catalytic SMART SM00320: WD40 repeats Gene3D G3DSA:3.30.200.20: no description Gene3D G3DSA:1.10.510.10: no description Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:2.130.10.10: no description |
| Fes1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR19316:SF5: ARM-DOMAIN PROTEIN PANTHER PTHR19316: PROTEIN FOLDING REGULATOR Gene3D G3DSA:1.25.10.10: no description Pfam PF08609: Fes1 |
| Rad16p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
PANTHER PTHR10799:SF62: DNA REPAIR HELICASE RAD5,16 PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Pfam PF00176: SNF2_N Pfam PF00271: Helicase_C Pfam PF00097: zf-C3HC4 Gene3D G3DSA:3.40.50.300: no description SMART SM00487: DEAD-like helicases superfamily SMART SM00184: Ring finger SMART SM00490: helicase superfamily c-terminal domain SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases |
| Mec1p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.10.1070.11: no description SUPERFAMILY SSF56112: Protein kinase-like (PK-like) PANTHER PTHR11139:SF5: GB DEF: ESR1 PROTEIN PANTHER PTHR11139: ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED SMART SM00802: Domain in UVSB PI-3 kinase, MEI-41 and ESR-1 SMART SM00146: Phosphoinositide 3-kinase, catalytic domain Pfam PF00454: PI3_PI4_kinase Pfam PF08064: UME Pfam PF02260: FATC Pfam PF02259: FAT |
| Hsm3p | SUPERFAMILY SSF48371: ARM repeat |
none |
| Ctr86p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR13255:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13255: ATAXIN-10 Gene3D G3DSA:1.25.10.10: no description Pfam PF09759: Atx10homo_assoc |
| Rad18p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
TIGRFAMs TIGR00599: rad18: DNA repair protein rad18 Pfam PF00097: zf-C3HC4 Pfam PF02037: SAP PANTHER PTHR14134: E3 UBIQUITIN-PROTEIN LIGASE RAD18 SMART SM00184: Ring finger SMART SM00734: Rad18-like CCHC zinc finger SMART SM00513: Putative DNA-binding (bihelical) motif pred |
| Apc11p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
PANTHER PTHR11210:SF10: ZINC FINGER DOMAIN CONTAINING PROTEIN PANTHER PTHR11210: RING FINGER Pfam PF12861: zf-Apc11 |
| Uso1p | SUPERFAMILY SSF48371: ARM repeat |
SUPERFAMILY SSF46966: Spectrin repeat PANTHER PTHR10013: GENERAL VESICULAR TRANSPORT FACTOR P115 Pfam PF04869: Uso1_p115_head Pfam PF04871: Uso1_p115_C |
| Syo1p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR13347: UNCHARACTERIZED |
| Bre1p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
Pfam PF08647: BRE1 Pfam PF13923: zf-C3HC4_2 SMART SM00184: Ring finger PANTHER PTHR23163:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23163: RING FINGER PROTEIN-RELATED |
| Ufd2p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR13931:SF2: UBIQUITINATION FACTOR E4B/UFD2(YEAST) PANTHER PTHR13931: UBIQUITINATION FACTOR E4 SMART SM00504: Modified RING finger domain Pfam PF10408: Ufd2P_core Pfam PF04564: U-box |
| Mak21p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12048: CCAAT-BINDING FACTOR-RELATED Pfam PF03914: CBF |
| Dop1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR14042:SF7: SUBFAMILY NOT NAMED PANTHER PTHR14042: DOPEY-RELATED Pfam PF04118: Dopey_N |
| San1p | Pfam PF13639: zf-RING_2 SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR12477:SF27: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR12477: SYNOVIOLIN-RELATED SMART SM00184: Ring finger |
| Sec7p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR10663:SF17: PROTEIN TRANSPORT PROTEIN SEC7 PANTHER PTHR10663: GUANYL-NUCLEOTIDE EXCHANGE FACTOR SMART SM00222: Sec7 domain SUPERFAMILY SSF48425: Sec7 domain Pfam PF01369: Sec7 Pfam PF12783: Sec7_N Pfam PF09324: DUF1981 Gene3D G3DSA:1.10.220.20: no description Gene3D G3DSA:1.10.1000.11: no description |
| Scc2p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR21704:SF3: GB DEF: SISTER CHROMATID COHESION PROTEIN 2 PANTHER PTHR21704: NIPPED-B-LIKE PROTEIN (DELANGIN) SCC2-RELATED Pfam PF12830: Nipped-B_C Pfam PF12765: Cohesin_HEAT |
| Gcd6p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR22572:SF7: EUKARIOTIC TRANSLATION INITIATION FACTOR 2B, EPSILON SUBUNIT PANTHER PTHR22572: SUGAR-1-PHOSPHATE GUANYL TRANSFERASE Pfam PF02020: W2 Pfam PF00132: Hexapep Pfam PF00483: NTP_transferase SUPERFAMILY SSF53448: Nucleotide-diphospho-sugar transferases SUPERFAMILY SSF51161: Trimeric LpxA-like enzymes Gene3D G3DSA:3.90.550.10: no description Gene3D G3DSA:2.160.10.10: no description Gene3D G3DSA:1.25.40.180: no description SMART SM00515: Domain at the C-termini of GCD6, eIF-2B epsi |
| Sec26p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR10635: COATOMER SUBUNIT BETA Gene3D G3DSA:1.25.10.10: no description Pfam PF01602: Adaptin_N Pfam PF07718: Coatamer_beta_C SMART SM00185: Armadillo/beta-catenin-like repeats PIR superfamily PIRSF005727: Coatomer, beta subunit |
| Rmd5p | Gene3D G3DSA:3.30.40.10: no description |
Pfam PF13445: zf-RING_LisH Pfam PF10607: CLTH SMART SM00668: C-terminal to LisH motif. PANTHER PTHR12170:SF3: SPORULATION PROTEIN RMD5-RELATED (GLUCOSE-INDUCED DEGRADATION PROTEIN 2) PANTHER PTHR12170: MACROPHAGE ERYTHROBLAST ATTACHER-RELATED |
| Pex10p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR23350: PEROXISOME ASSEMBLY PROTEIN 10 SMART SM00184: Ring finger Pfam PF04757: Pex2_Pex12 Pfam PF13923: zf-C3HC4_2 |
| Hel2p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
Pfam PF13920: zf-C3HC4_3 PANTHER PTHR22938:SF0: SUBFAMILY NOT NAMED PANTHER PTHR22938: ZINC FINGER PROTEIN 598 |
| Pib1p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box Pfam PF13639: zf-RING_2 |
SMART SM00064: Protein present in Fab1, YOTB, Vac1, and EEA SMART SM00184: Ring finger SUPERFAMILY SSF57903: FYVE/PHD zinc finger PANTHER PTHR18851:SF6: FYVE AND COILED-COIL DOMAIN CONTAINING 1 PANTHER PTHR18851: FYVE AND COILED-COIL DOMAIN CONTAINING 1 Pfam PF01363: FYVE |
| Pep7p | Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR13510:SF9: VACUOLAR SEGREGATION PROTEIN PEP7 (VAC1 PROTEIN) PANTHER PTHR13510: FYVE-FINGER-CONTAINING RAB5 EFFECTOR PROTEIN RABENOSYN-5-RELATED SMART SM00064: Protein present in Fab1, YOTB, Vac1, and EEA SUPERFAMILY SSF57903: FYVE/PHD zinc finger SUPERFAMILY SSF140125: Rabenosyn-5 Rab-binding domain-like Pfam PF01363: FYVE |
| Ycg1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR14418:SF5: SUBFAMILY NOT NAMED PANTHER PTHR14418: CONDENSIN COMPLEX SUBUNIT 3-RELATED Gene3D G3DSA:1.25.10.10: no description Pfam PF12719: Cnd3 |
| Msn5p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR11223:SF9: ADL128CP, PUTATIVE PANTHER PTHR11223: EXPORTIN 1/5 |
| Sxm1p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00913: Importin-beta N-terminal domain Pfam PF03810: IBN_N PANTHER PTHR10997:SF18: IMPORTIN 7, 8 (IMP7, 8) (RAN-BINDING PROTEIN 7, 8) PANTHER PTHR10997: IMPORTIN-7, 8, 11 Gene3D G3DSA:1.25.10.10: no description |
| Siz1p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
Pfam PF14324: PINIT Pfam PF02891: zf-MIZ Pfam PF02037: SAP PANTHER PTHR10782:SF13: E3 SUMO-PROTEIN LIGASE PANTHER PTHR10782: ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN SUPERFAMILY SSF68906: SAP domain Gene3D G3DSA:1.10.720.30: no description SMART SM00513: Putative DNA-binding (bihelical) motif predi |
| Tom1p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:3.30.2160.10: no description SMART SM00119: Domain Homologous to E6-AP Carboxyl Terminus PANTHER PTHR11254:SF131: SUBFAMILY NOT NAMED PANTHER PTHR11254: HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Pfam PF00632: HECT Pfam PF06012: DUF908 Pfam PF06025: DUF913 Pfam PF14377: DUF4414 SUPERFAMILY SSF56204: Hect, E3 ligase catalytic domain |
| Tfb3p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
PIR superfamily PIRSF003338: CDK-activating kinase assembly factor MAT1 Pfam PF06391: MAT1 PANTHER PTHR12683:SF4: TRANSCRIPTION/REPAIR FACTOR TFIIH PANTHER PTHR12683: FAMILY NOT NAMED TIGRFAMs TIGR00570: cdk7: CDK-activating kinase assembly factor MAT1 |
| Puf6p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description SMART SM00025: Pumilio-like repeats PANTHER PTHR13389: UNCHARACTERIZED Pfam PF08144: CPL |
| Vac8p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description SMART SM00185: Armadillo/beta-catenin-like repeats PANTHER PTHR23315:SF8: VACUOLAR PROTEIN 8-RELATED PANTHER PTHR23315: BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Pfam PF00514: Arm Pfam PF13513: HEAT_EZ |
| Mms21p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
Pfam PF11789: zf-Nse PANTHER PTHR21330:SF1: UNCHARACTERIZED PANTHER PTHR21330: UNCHARACTERIZED |
| Pol5p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF04931: DNA_pol_phi PANTHER PTHR13213:SF2: DNA POLYMERASE V PANTHER PTHR13213: DNA POLYMERASE V RELATED |
| Jhd1p | Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF51197: Clavaminate synthase-like SMART SM00249: PHD zinc finger SMART SM00558: A domain family that is part of the cupin me PANTHER PTHR23123:SF0: SUBFAMILY NOT NAMED PANTHER PTHR23123: PHD/F-BOX CONTAINING PROTEIN Gene3D G3DSA:2.60.120.650: no description |
| Mot2p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
Pfam PF13893: RRM_5 Gene3D G3DSA:3.30.70.330: no description SUPERFAMILY SSF54928: RNA-binding domain, RBD PANTHER PTHR12603:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12603: CCR4-NOT TRANSCRIPTION COMPLEX RELATED SMART SM00361: RNA recognition motif |
| Tsc11p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR13298:SF3: GB DEF: HYPOTHETICAL 164.4 KDA PROTEIN IN MET6-PUP3 INTERGENIC REGION PANTHER PTHR13298: CYTOSOLIC REGULATOR PIANISSIMO |
| Kap123p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00913: Importin-beta N-terminal domain Pfam PF13513: HEAT_EZ Pfam PF03810: IBN_N Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR10527:SF6: IMPORTIN-4 (IMPORTIN-4B)(RAN-BINDING PROTEIN 4) PANTHER PTHR10527: IMPORTIN BETA |
| Slx8p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR12313: RNF5 SMART SM00184: Ring finger Pfam PF13923: zf-C3HC4_2 |
| Blm10p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF11919: DUF3437 Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR32170:SF0: SUBFAMILY NOT NAMED PANTHER PTHR32170: FAMILY NOT NAMED |
| Sad1p | Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF54001: Cysteine proteinases SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z PANTHER PTHR24006:SF87: SUBFAMILY NOT NAMED PANTHER PTHR24006: FAMILY NOT NAMED Pfam PF02148: zf-UBP Pfam PF00443: UCH |
| Fab1p | Gene3D G3DSA:3.30.40.10: no description |
Gene3D G3DSA:3.50.7.10: no description Gene3D G3DSA:3.30.800.10: no description Gene3D G3DSA:3.30.810.10: no description SMART SM00064: Protein present in Fab1, YOTB, Vac1, and EEA SMART SM00330: Phosphatidylinositol phosphate kinases Pfam PF01504: PIP5K Pfam PF00118: Cpn60_TCP1 Pfam PF01363: FYVE SUPERFAMILY SSF56104: SAICAR synthase-like SUPERFAMILY SSF52029: GroEL apical domain-like SUPERFAMILY SSF57903: FYVE/PHD zinc finger PANTHER PTHR11353:SF14: FYVE FINGER-CONTAINING PHOSPHOINOSITIDE KINASE, FYV1 PANTHER PTHR11353: CHAPERONIN |
| Puf4p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00025: Pumilio-like repeats PANTHER PTHR12537:SF13: PUMILIO-RELATED PANTHER PTHR12537: RNA BINDING PROTEIN PUMILIO-RELATED Pfam PF00806: PUF Gene3D G3DSA:1.25.10.10: no description |
| Kap122p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12363:SF2: GB DEF: PLEIOTROPIC DRUG RESISTANCE REGULATORY PROTEIN 6 PANTHER PTHR12363: TRANSPORTIN 3 AND IMPORTIN 13 |
| Pib2p | Gene3D G3DSA:3.30.40.10: no description |
Pfam PF01363: FYVE PANTHER PTHR22835:SF51: PREDICTED: SIMILAR TO ENDOFIN PANTHER PTHR22835: ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN SUPERFAMILY SSF57903: FYVE/PHD zinc finger SMART SM00064: Protein present in Fab1, YOTB, Vac1, and EEA |
| Tif4632p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF02854: MIF4G Pfam PF12152: eIF_4G1 SUPERFAMILY SSF101489: Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain PANTHER PTHR23253:SF18: MIF4G DOMAIN CONTAINING PROTEIN PANTHER PTHR23253: EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA SMART SM00543: Middle domain of eukaryotic initiation facto Gene3D G3DSA:1.25.40.180: no description |
| Scy1p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:3.30.200.20: no description Gene3D G3DSA:1.10.510.10: no description Gene3D G3DSA:1.25.10.10: no description Pfam PF00069: Pkinase SMART SM00220: Serine/Threonine protein kinases, catalytic PANTHER PTHR12984:SF12: SUBFAMILY NOT NAMED PANTHER PTHR12984: SCY1-RELATED S/T PROTEIN KINASE-LIKE SUPERFAMILY SSF56112: Protein kinase-like (PK-like) |
| Snt2p | Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF57903: FYVE/PHD zinc finger SUPERFAMILY SSF46689: Homeodomain-like SUPERFAMILY SSF57783: Zinc beta-ribbon SMART SM00439: Bromo adjacent homology domain SMART SM00249: PHD zinc finger SMART SM00717: SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin Pfam PF01426: BAH Pfam PF00628: PHD Pfam PF13832: zf-HC5HC2H_2 PANTHER PTHR13793:SF12: PHD FINGER PROTEIN PANTHER PTHR13793: PHD FINGER PROTEINS |
| Mpt5p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description SMART SM00025: Pumilio-like repeats Pfam PF00806: PUF PANTHER PTHR12537:SF13: PUMILIO-RELATED PANTHER PTHR12537: RNA BINDING PROTEIN PUMILIO-RELATED |
| Gcn1p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description Pfam PF12074: DUF3554 Pfam PF13646: HEAT_2 PANTHER PTHR23346:SF8: TRANSLATIONAL ACTIVATOR GCN1 PANTHER PTHR23346: TRANSLATIONAL ACTIVATOR GCN1-RELATED |
| Chc1p | SUPERFAMILY SSF48371: ARM repeat |
PIR superfamily PIRSF002290: Clathrin heavy chain Gene3D G3DSA:2.130.10.110: no description Gene3D G3DSA:1.25.40.10: no description SMART SM00299: Clathrin heavy chain repeat homology Pfam PF00637: Clathrin Pfam PF13838: Clathrin_H_link Pfam PF01394: Clathrin_propel Pfam PF09268: Clathrin-link SUPERFAMILY SSF50989: Clathrin heavy-chain terminal domain PANTHER PTHR10292:SF1: CLATHRIN HEAVY CHAIN PANTHER PTHR10292: CLATHRIN HEAVY CHAIN |
| Cse1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR10997:SF8: IMPORTIN-ALPHA RE-EXPORTER (CHROMOSOME SEGREGATION 1-LIKE PROTEIN) PANTHER PTHR10997: IMPORTIN-7, 8, 11 Gene3D G3DSA:1.25.10.10: no description Pfam PF08506: Cse1 Pfam PF03378: CAS_CSE1 Pfam PF03810: IBN_N SMART SM00913: Importin-beta N-terminal domain |
| Kap114p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR10997:SF5: GB DEF: IMPORTIN BETA-5 SUBUNIT (KARYOPHERIN BETA-5 SUBUNIT) (114 KDA KARYOPHERIN) PANTHER PTHR10997: IMPORTIN-7, 8, 11 SMART SM00913: Importin-beta N-terminal domain Pfam PF03810: IBN_N Gene3D G3DSA:1.25.10.10: no description |
| Tif4631p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00543: Middle domain of eukaryotic initiation facto SUPERFAMILY SSF101489: Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain Pfam PF02854: MIF4G Pfam PF12152: eIF_4G1 PANTHER PTHR23253:SF18: MIF4G DOMAIN CONTAINING PROTEIN PANTHER PTHR23253: EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA Gene3D G3DSA:1.25.40.180: no description |
| Hgh1p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF04063: DUF383 Pfam PF04064: DUF384 PANTHER PTHR32199:SF1: SUBFAMILY NOT NAMED PANTHER PTHR32199: FAMILY NOT NAMED |
| Crm1p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00913: Importin-beta N-terminal domain SMART SM01102: CRM1 C terminal Pfam PF08767: CRM1_C Pfam PF08389: Xpo1 Pfam PF03810: IBN_N Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR11223:SF2: EXPORTIN 1 (CHROMOSOME REGION MAINTENANCE PROTEIN 1) PANTHER PTHR11223: EXPORTIN 1/5 |
| Sda1p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF05285: SDA1 Pfam PF08158: NUC130_3NT PANTHER PTHR12730:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12730: HSDA/SDA1-RELATED |
| Apl6p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF01602: Adaptin_N PANTHER PTHR11134:SF1: ADAPTER-RELATED PROTEIN COMPLEX 3, BETA SUBUNIT PANTHER PTHR11134: ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT Gene3D G3DSA:1.25.10.10: no description |
| Cwc22p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR18034: CELL CYCLE CONTROL PROTEIN CWF22-RELATED Gene3D G3DSA:1.25.40.180: no description Pfam PF02847: MA3 Pfam PF02854: MIF4G SMART SM00543: Middle domain of eukaryotic initiation facto SMART SM00544: Domain in DAP-5, eIF4G, MA-3 and other prote |
| Etp1p | Gene3D G3DSA:3.30.40.10: no description Pfam PF13639: zf-RING_2 SUPERFAMILY SSF57850: RING/U-box |
SMART SM00184: Ring finger SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z Pfam PF07576: BRAP2 Pfam PF02148: zf-UBP ProDom PD017029: Q6Q5F9_YEAST_Q6Q5F9; PANTHER PTHR24007: FAMILY NOT NAMED |
| Ecm29p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF13001: Ecm29 Pfam PF02985: HEAT PANTHER PTHR23346:SF2: PROTEASOME-ASSOCIATED PROTEIN ECM29-RELATED PANTHER PTHR23346: TRANSLATIONAL ACTIVATOR GCN1-RELATED Gene3D G3DSA:1.25.10.10: no description |
| Rpn1p | SUPERFAMILY SSF48371: ARM repeat |
PIR superfamily PIRSF015965: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit Pfam PF01851: PC_rep PANTHER PTHR10943:SF1: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 (26S PROTEASOME REGULATORY SUBUNIT RPN1) PANTHER PTHR10943: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT |
| Nmd2p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.40.180: no description PANTHER PTHR12839:SF7: SUBFAMILY NOT NAMED PANTHER PTHR12839: NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 (UP-FRAMESHIFT SUPPRESSOR 2) Pfam PF02854: MIF4G Pfam PF04050: Upf2 SMART SM00543: Middle domain of eukaryotic initiation facto |
| Ipi1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR16056: UNCHARACTERIZED Pfam PF12333: Ipi1_N |
| Yng2p | Gene3D G3DSA:3.30.40.10: no description |
Pfam PF12998: ING Pfam PF00628: PHD SMART SM00249: PHD zinc finger PANTHER PTHR10333: INHIBITOR OF GROWTH PROTEIN SUPERFAMILY SSF57903: FYVE/PHD zinc finger |
| Tra1p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:1.25.40.10: no description Gene3D G3DSA:1.10.1070.11: no description SUPERFAMILY SSF56112: Protein kinase-like (PK-like) PANTHER PTHR11139:SF2: TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEIN PANTHER PTHR11139: ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED SMART SM00146: Phosphoinositide 3-kinase, catalytic domain Pfam PF02259: FAT Pfam PF00454: PI3_PI4_kinase Pfam PF02260: FATC |
| Dma1p | Pfam PF13639: zf-RING_2 SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
Pfam PF00498: FHA PANTHER PTHR15067:SF4: SUBFAMILY NOT NAMED PANTHER PTHR15067: FAMILY NOT NAMED SUPERFAMILY SSF49879: SMAD/FHA domain Gene3D G3DSA:2.60.200.20: no description SMART SM00240: Forkhead associated domain |
| Kog1p | SUPERFAMILY SSF48371: ARM repeat |
SUPERFAMILY SSF50978: WD40 repeat-like PRINTS PR01547: YEAST176DUF PANTHER PTHR12848:SF4: GB DEF: HYPOTHETICAL 175.8 KDA TRP-ASP REPEATS CONTAINING PROTEIN IN GND1-IKI1 INTERGENI PANTHER PTHR12848: FAMILY NOT NAMED Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:2.130.10.10: no description Pfam PF02985: HEAT |
| Vid28p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR15651:SF2: GB DEF: VACUOLAR IMPORT AND DEGRADATION PROTEIN VID28 GLUCOSE-INDUCED DEGRADATION PROTE PANTHER PTHR15651: FAMILY NOT NAMED |
| Irr1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR11199:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11199: STROMAL ANTIGEN Pfam PF08514: STAG |
| Ssm4p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box SMART SM00744: The RING-variant domain is a C4HC3 zinc-fing |
PANTHER PTHR13145:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13145: SSM4 PROTEIN Pfam PF12906: RINGv |
| Rpn2p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF01851: PC_rep Pfam PF13646: HEAT_2 PANTHER PTHR10943:SF2: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1 (26S PROTEASOME REGULATORY SUBUNIT RPN2) PANTHER PTHR10943: 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT Gene3D G3DSA:1.25.10.10: no description PIR superfamily PIRSF015947: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit |
| Met18p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR12891: DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19 Pfam PF12460: MMS19_N |
| Tao3p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF14222: MOR2-PAG1_N Pfam PF14225: MOR2-PAG1_C Pfam PF14228: MOR2-PAG1_mid PANTHER PTHR12295:SF4: CELL MORPHOGENESIS PROTEIN PAG PANTHER PTHR12295: UNCHARACTERIZED |
| Bnr1p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00498: Formin Homology Pfam PF02181: FH2 SUPERFAMILY SSF101447: Formin homology 2 domain (FH2 domain) PANTHER PTHR23213:SF6: CELL DIVISION CONTROL PROTEIN 12-RELATED PANTHER PTHR23213: FORMIN-RELATED |
| Nop9p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00025: Pumilio-like repeats Pfam PF00806: PUF PANTHER PTHR13102:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13102: PROTEIN C14ORF21 Gene3D G3DSA:1.25.10.10: no description |
| Set4p | Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF82199: SET domain SUPERFAMILY SSF57903: FYVE/PHD zinc finger Gene3D G3DSA:2.170.270.10: no description Pfam PF00856: SET Pfam PF00628: PHD PANTHER PTHR16286: MIXED-LINEAGE LEUKEMIA 5, MLL5 SMART SM00249: PHD zinc finger SMART SM00317: SET (Su(var)3-9, Enhancer-of-zeste, Trithora |
| Utp10p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR13457:SF0: SUBFAMILY NOT NAMED PANTHER PTHR13457: BAP28 SMART SM01036: BP28CT (NUC211) domain Pfam PF08146: BP28CT Pfam PF12397: U3snoRNP10 Gene3D G3DSA:1.25.10.10: no description |
| Far1p | Gene3D G3DSA:3.30.40.10: no description |
none |
| Laa1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR21663: HYPOTHETICAL HEAT DOMAIN-CONTAINING |
| Apl1p | SUPERFAMILY SSF48371: ARM repeat |
PIR superfamily PIRSF002291: Adaptor protein complex, beta subunit PANTHER PTHR11134:SF3: ADAPTER-RELATED PROTEIN COMPLEX 1, BETA SUBUNIT PANTHER PTHR11134: ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT Pfam PF01602: Adaptin_N Gene3D G3DSA:1.25.10.10: no description |
| Tor1p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00146: Phosphoinositide 3-kinase, catalytic domain SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF47212: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) Pfam PF02259: FAT Pfam PF11865: DUF3385 Pfam PF00454: PI3_PI4_kinase Pfam PF08771: Rapamycin_bind Pfam PF02260: FATC Pfam PF13513: HEAT_EZ PANTHER PTHR11139:SF9: FKBP-RAPAMYCIN ASSOCIATED PROTEIN PANTHER PTHR11139: ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:3.30.1010.10: no description Gene3D G3DSA:1.10.1070.11: no description |
| Lia1p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00567: E-Z type HEAT repeats Gene3D G3DSA:1.25.10.10: no description Pfam PF13646: HEAT_2 PANTHER PTHR12697: PBS LYASE HEAT-LIKE PROTEIN |
| Jsn1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12537:SF18: JSN1 PROTEIN (PUF1 PROTEIN) PANTHER PTHR12537: RNA BINDING PROTEIN PUMILIO-RELATED Gene3D G3DSA:3.30.70.330: no description Gene3D G3DSA:1.25.10.10: no description SMART SM00360: RNA recognition motif SMART SM00025: Pumilio-like repeats SUPERFAMILY SSF54928: RNA-binding domain, RBD Pfam PF00806: PUF Pfam PF00076: RRM_1 |
| Jhd2p | Gene3D G3DSA:3.30.40.10: no description |
SMART SM00545: Small domain found in the jumonji family of SMART SM00249: PHD zinc finger SMART SM00558: A domain family that is part of the cupin me PANTHER PTHR10694:SF8: RETINOBLASTOMA BINDING PROTEIN-RELATED PANTHER PTHR10694: JUMONJI DOMAIN CONTAINING PROTEIN Pfam PF02373: JmjC Pfam PF02375: JmjN Pfam PF00628: PHD SUPERFAMILY SSF51197: Clavaminate synthase-like SUPERFAMILY SSF57903: FYVE/PHD zinc finger |
| Nmd5p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF03810: IBN_N Gene3D G3DSA:1.25.10.10: no description SMART SM00913: Importin-beta N-terminal domain PANTHER PTHR10997:SF18: IMPORTIN 7, 8 (IMP7, 8) (RAN-BINDING PROTEIN 7, 8) PANTHER PTHR10997: IMPORTIN-7, 8, 11 |
| Bye1p | Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF46942: Elongation factor TFIIS domain 2 SUPERFAMILY SSF57903: FYVE/PHD zinc finger PANTHER PTHR11477: TRANSCRIPTION ELONGATION FACTOR S-II Pfam PF07500: TFIIS_M Pfam PF00628: PHD Pfam PF07744: SPOC Gene3D G3DSA:1.10.472.30: no description SMART SM00249: PHD zinc finger SMART SM00510: Domain in the central regions of transcripti |
| Ufd4p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR11254:SF74: UBIQUITIN FUSION DEGRADATION PROTEIN 4 PANTHER PTHR11254: HECT DOMAIN UBIQUITIN-PROTEIN LIGASE SMART SM00119: Domain Homologous to E6-AP Carboxyl Terminus Pfam PF00632: HECT Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:3.30.2160.10: no description SUPERFAMILY SSF56204: Hect, E3 ligase catalytic domain |
| Tfa1p | Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR13097:SF3: GENERAL TRANSCRIPTION FACTOR IIE SUBUNIT 1 PANTHER PTHR13097: TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT SMART SM00531: Transcription initiation factor IIE Pfam PF02002: TFIIE_alpha Pfam PF08271: TF_Zn_Ribbon SUPERFAMILY SSF57783: Zinc beta-ribbon |
| Tti1p | SUPERFAMILY SSF48371: ARM repeat |
PIR superfamily PIRSF005250: Uncharacterised conserved protein, UCP005250 type PANTHER PTHR18460:SF3: SUBFAMILY NOT NAMED PANTHER PTHR18460: UNCHARACTERIZED |
| Tul1p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description Pfam PF13639: zf-RING_2 |
SMART SM00184: Ring finger PANTHER PTHR22764:SF26: SUBFAMILY NOT NAMED PANTHER PTHR22764: RING FINGER PROTEIN 11 (SID 1669) (NEDD4 WW DOMAIN-BINDING PROTEIN 2). |
| Mpe1p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
SMART SM00343: zinc finger PANTHER PTHR15439:SF0: SUBFAMILY NOT NAMED PANTHER PTHR15439: RETINOBLASTOMA-BINDING PROTEIN 6 Pfam PF08783: DWNN Pfam PF11789: zf-Nse |
| Rrn3p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12790: TRANSCRIPTION INITIATION FACTOR IA (RRN3) Pfam PF05327: RRN3 |
| Apl2p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR11134:SF3: ADAPTER-RELATED PROTEIN COMPLEX 1, BETA SUBUNIT PANTHER PTHR11134: ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT Pfam PF01602: Adaptin_N Gene3D G3DSA:1.25.10.10: no description PIR superfamily PIRSF002291: Adaptor protein complex, beta subunit |
| Hym1p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF08569: Mo25 Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR10182:SF3: CALCIUM-BINDING PROTEIN 39 PANTHER PTHR10182: CALCIUM-BINDING PROTEIN 39-RELATED |
| Tor2p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR11139:SF9: FKBP-RAPAMYCIN ASSOCIATED PROTEIN PANTHER PTHR11139: ATAXIA TELANGIECTASIA MUTATED (ATM)-RELATED SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF47212: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) SMART SM00146: Phosphoinositide 3-kinase, catalytic domain Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:3.30.1010.10: no description Gene3D G3DSA:1.10.1070.11: no description Pfam PF02259: FAT Pfam PF11865: DUF3385 Pfam PF00454: PI3_PI4_kinase Pfam PF08771: Rapamycin_bind Pfam PF02260: FATC |
| Los1p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF08389: Xpo1 PANTHER PTHR15952:SF10: GB DEF: LOS1 PROTEIN PANTHER PTHR15952: EXPORTIN-T/LOS1 |
| Hel1p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
SMART SM00184: Ring finger SMART SM00647: In Between Ring fingers Pfam PF01485: IBR Pfam PF00097: zf-C3HC4 PANTHER PTHR11685:SF14: GB DEF: HYPOTHETICAL 63.6 KDA PROTEIN IN YPT52-GCN3 INTERGENIC REGION PANTHER PTHR11685: ARIADNE RING ZINC FINGER |
| Set3p | Gene3D G3DSA:3.30.40.10: no description |
SMART SM00249: PHD zinc finger SMART SM00317: SET (Su(var)3-9, Enhancer-of-zeste, Trithora Pfam PF00628: PHD Pfam PF00856: SET SUPERFAMILY SSF82199: SET domain SUPERFAMILY SSF57903: FYVE/PHD zinc finger Gene3D G3DSA:2.170.270.10: no description PANTHER PTHR16286: MIXED-LINEAGE LEUKEMIA 5, MLL5 |
| Puf3p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description SMART SM00025: Pumilio-like repeats Pfam PF00806: PUF PANTHER PTHR12537:SF12: PUMILIO 1, 2 PANTHER PTHR12537: RNA BINDING PROTEIN PUMILIO-RELATED |
| Prp19p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
PANTHER PTHR13889:SF1: PRE-MRNA SPLICING FACTOR PRP19, YEAST PANTHER PTHR13889: PRE-MRNA SPLICING FACTOR PRP19-RELATED Gene3D G3DSA:2.130.10.10: no description SUPERFAMILY SSF50978: WD40 repeat-like Pfam PF08606: Prp19 SMART SM00504: Modified RING finger domain |
| Rad5p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases PANTHER PTHR10799:SF234: SUBFAMILY NOT NAMED PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Pfam PF00176: SNF2_N Pfam PF08797: HIRAN Pfam PF00271: Helicase_C Pfam PF13923: zf-C3HC4_2 SMART SM00910: no description SMART SM00487: DEAD-like helicases superfamily SMART SM00184: Ring finger SMART SM00490: helicase superfamily c-terminal domain Gene3D G3DSA:3.40.50.300: no description |
| Stu2p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12609:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12609: MICROTUBULE ASSOCIATED PROTEIN XMAP215 Gene3D G3DSA:1.25.10.10: no description |
| Ioc2p | Gene3D G3DSA:3.30.40.10: no description |
none |
| Pep3p | Gene3D G3DSA:3.30.40.10: no description |
Pfam PF05131: Pep3_Vps18 Pfam PF00637: Clathrin Pfam PF10367: Vps39_2 SMART SM00299: Clathrin heavy chain repeat homology PANTHER PTHR23323:SF29: PREDICTED: SIMILAR TO VACUOLAR PROTEIN SORTING PROTEIN 18 PANTHER PTHR23323: VACUOLAR MEMBRANE PROTEIN RELATED |
| Vps34p | SUPERFAMILY SSF48371: ARM repeat |
SUPERFAMILY SSF56112: Protein kinase-like (PK-like) SUPERFAMILY SSF49562: C2 domain (Calcium/lipid-binding domain, CaLB) Pfam PF00613: PI3Ka Pfam PF00454: PI3_PI4_kinase Pfam PF00792: PI3K_C2 PANTHER PTHR10048:SF7: PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT TYPE 3 PANTHER PTHR10048: PHOSPHATIDYLINOSITOL KINASE PIR superfamily PIRSF000587: Phosphatidylinositol 3-kinase, Vps34 type Gene3D G3DSA:2.60.40.150: no description Gene3D G3DSA:1.25.40.70: no description Gene3D G3DSA:3.30.1010.10: no description Gene3D G3DSA:1.10.1070.11: no description SMART SM00142: Phosphoinositide 3-kinase, region postulated SMART SM00145: Phosphoinositide 3-kinase family, accessory SMART SM00146: Phosphoinositide 3-kinase, catalytic domain |
| Irc20p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
SMART SM00487: DEAD-like helicases superfamily SMART SM00184: Ring finger SMART SM00490: helicase superfamily c-terminal domain Gene3D G3DSA:3.40.50.300: no description Pfam PF00176: SNF2_N Pfam PF13923: zf-C3HC4_2 SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases PANTHER PTHR10799:SF233: SUBFAMILY NOT NAMED PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED |
| Yef3p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR19211:SF5: ELONGATION FACTOR 3 PANTHER PTHR19211: ATP-BINDING TRANSPORT PROTEIN-RELATED Pfam PF00005: ABC_tran Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:3.40.50.300: no description SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SMART SM00382: ATPases associated with a variety of cellula |
| Ycs4p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR14222:SF0: SUBFAMILY NOT NAMED PANTHER PTHR14222: CONDENSIN Pfam PF12717: Cnd1 Pfam PF12922: Cnd1_N Gene3D G3DSA:1.25.10.10: no description PIR superfamily PIRSF017127: Chromosome condensation complex condensin, subunit D2 |
| Stt4p | SUPERFAMILY SSF48371: ARM repeat |
SUPERFAMILY SSF56112: Protein kinase-like (PK-like) Gene3D G3DSA:1.25.40.70: no description Gene3D G3DSA:3.30.1010.10: no description Gene3D G3DSA:1.10.1070.11: no description Pfam PF00454: PI3_PI4_kinase Pfam PF00613: PI3Ka PANTHER PTHR10048:SF15: PHOSPHATIDYLINOSITOL 4-KINASE ALPHA PANTHER PTHR10048: PHOSPHATIDYLINOSITOL KINASE SMART SM00145: Phosphoinositide 3-kinase family, accessory SMART SM00146: Phosphoinositide 3-kinase, catalytic domain |
| Cwc24p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF90229: CCCH zinc finger Pfam PF13923: zf-C3HC4_2 Pfam PF00642: zf-CCCH SMART SM00356: zinc finger SMART SM00184: Ring finger Gene3D G3DSA:4.10.1000.10: no description PANTHER PTHR12930: ZINC FINGER PROTEIN 183 |
| Sgd1p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF02847: MA3 Pfam PF02854: MIF4G PANTHER PTHR18034:SF4: SGD1P PANTHER PTHR18034: CELL CYCLE CONTROL PROTEIN CWF22-RELATED SMART SM00543: Middle domain of eukaryotic initiation facto SMART SM00544: Domain in DAP-5, eIF4G, MA-3 and other prote Gene3D G3DSA:1.25.40.180: no description |
| Kap95p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description Pfam PF13513: HEAT_EZ Pfam PF03810: IBN_N SMART SM00913: Importin-beta N-terminal domain SMART SM00185: Armadillo/beta-catenin-like repeats PANTHER PTHR10527:SF1: IMPORTIN SUBUNIT BETA-1 (KARYOPHERIN SUBUNIT BETA-1) PANTHER PTHR10527: IMPORTIN BETA |
| Vac14p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF11916: Vac14_Fig4_bd Pfam PF12755: Vac14_Fab1_bd PANTHER PTHR16023:SF0: SUBFAMILY NOT NAMED PANTHER PTHR16023: TAX1 BINDING PROTEIN-RELATED Gene3D G3DSA:1.25.10.10: no description |
| Cst9p | SUPERFAMILY SSF57850: RING/U-box |
Pfam PF02891: zf-MIZ PANTHER PTHR22663:SF10: UNCHARACTERIZED PANTHER PTHR22663: UNCHARACTERIZED |
| Mag2p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
Pfam PF13923: zf-C3HC4_2 PANTHER PTHR12983:SF6: SUBFAMILY NOT NAMED PANTHER PTHR12983: FAMILY NOT NAMED SMART SM00184: Ring finger |
| Itt1p | SUPERFAMILY SSF57850: RING/U-box |
Pfam PF01485: IBR PANTHER PTHR11685:SF58: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR11685: ARIADNE RING ZINC FINGER SMART SM00184: Ring finger SMART SM00647: In Between Ring fingers |
| Pex12p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
Pfam PF04757: Pex2_Pex12 PANTHER PTHR12888:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12888: PEROXISOME ASSEMBLY PROTEIN 12 (PEROXIN-12) |
| Rco1p | Gene3D G3DSA:3.30.40.10: no description |
SMART SM00249: PHD zinc finger SUPERFAMILY SSF57903: FYVE/PHD zinc finger PANTHER PTHR25462:SF4: SUBFAMILY NOT NAMED PANTHER PTHR25462: FAMILY NOT NAMED Pfam PF00628: PHD |
| Pds5p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12663:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12663: ANDROGEN INDUCED INHIBITOR OF PROLIFERATION (AS3) / PDS5-RELATED Gene3D G3DSA:1.25.10.10: no description |
| Sto1p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF09090: MIF4G_like_2 Pfam PF09088: MIF4G_like Pfam PF02854: MIF4G SMART SM00543: Middle domain of eukaryotic initiation facto Gene3D G3DSA:1.25.40.180: no description PANTHER PTHR12412:SF1: LARGE SUBUNIT OF THE NUCLEAR CAP-BINDING PROTEIN COMPLEX PANTHER PTHR12412: CAP BINDING PROTEIN |
| Ecm5p | Gene3D G3DSA:3.30.40.10: no description |
Gene3D G3DSA:1.10.150.60: no description PANTHER PTHR10694:SF8: RETINOBLASTOMA BINDING PROTEIN-RELATED PANTHER PTHR10694: JUMONJI DOMAIN CONTAINING PROTEIN SMART SM01014: ARID/BRIGHT DNA binding domain SMART SM00501: BRIGHT, ARID (A/T-rich interaction domain) d SMART SM00558: A domain family that is part of the cupin me SMART SM00249: PHD zinc finger Pfam PF01388: ARID Pfam PF00628: PHD SUPERFAMILY SSF46774: ARID-like SUPERFAMILY SSF57903: FYVE/PHD zinc finger |
| Ubp8p | Gene3D G3DSA:3.30.40.10: no description |
SMART SM00290: Ubiquitin Carboxyl-terminal Hydrolase-like z PANTHER PTHR24006:SF72: SUBFAMILY NOT NAMED PANTHER PTHR24006: FAMILY NOT NAMED SUPERFAMILY SSF54001: Cysteine proteinases Pfam PF00443: UCH Pfam PF02148: zf-UBP |
| Pep5p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF50978: WD40 repeat-like PANTHER PTHR23323:SF24: VACUOLAR MEMBRANE PROTEIN PEP5, 11 PANTHER PTHR23323: VACUOLAR MEMBRANE PROTEIN RELATED SMART SM00249: PHD zinc finger SMART SM00184: Ring finger Gene3D G3DSA:2.130.10.10: no description PIR superfamily PIRSF007860: Vacuolar protein sorting-associated protein 11 Pfam PF12451: VPS11_C |
| Hsh155p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12097: SPLICING FACTOR 3B, SUBUNIT 1-RELATED Gene3D G3DSA:1.25.10.10: no description |
| Pse1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR10527:SF5: IMPORTIN-5 (IMPORTIN SUBUNIT BETA-3) PANTHER PTHR10527: IMPORTIN BETA Gene3D G3DSA:1.25.10.10: no description Pfam PF13646: HEAT_2 |
| Hef3p | SUPERFAMILY SSF48371: ARM repeat |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases PANTHER PTHR19211:SF5: ELONGATION FACTOR 3 PANTHER PTHR19211: ATP-BINDING TRANSPORT PROTEIN-RELATED Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:3.40.50.300: no description Pfam PF00005: ABC_tran SMART SM00382: ATPases associated with a variety of cellula |
| Lap2p | SUPERFAMILY SSF48371: ARM repeat |
SUPERFAMILY SSF55486: Metalloproteases ("zincins"), catalytic domain SUPERFAMILY SSF63737: Leukotriene A4 hydrolase N-terminal domain Pfam PF01433: Peptidase_M1 Pfam PF09127: Leuk-A4-hydro_C PANTHER PTHR11533:SF4: LEUKOTRIENE A-4 HYDROLASE PANTHER PTHR11533: PROTEASE M1 ZINC METALLOPROTEASE PRINTS PR00756: ALADIPTASE TIGRFAMs TIGR02411: leuko_A4_hydro: leukotriene A-4 hydrolase/aminopep Gene3D G3DSA:1.10.390.10: no description |
| Pho23p | Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR10333: INHIBITOR OF GROWTH PROTEIN SUPERFAMILY SSF57903: FYVE/PHD zinc finger Pfam PF12998: ING Pfam PF00628: PHD SMART SM00249: PHD zinc finger |
| Dma2p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF49879: SMAD/FHA domain Pfam PF00498: FHA PANTHER PTHR15067:SF5: RING FINGER PROTEIN YNL116W PANTHER PTHR15067: FAMILY NOT NAMED SMART SM00240: Forkhead associated domain Gene3D G3DSA:2.60.200.20: no description |
| Ncs2p | Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR20882:SF3: ACR271CP PANTHER PTHR20882: FAMILY NOT NAMED Pfam PF10288: DUF2392 |
| Srp1p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description Pfam PF00514: Arm Pfam PF01749: IBB PANTHER PTHR23316: IMPORTIN ALPHA SMART SM00185: Armadillo/beta-catenin-like repeats |
| Pik1p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF00454: PI3_PI4_kinase Pfam PF11522: Pik1 Pfam PF00613: PI3Ka Gene3D G3DSA:1.25.40.70: no description Gene3D G3DSA:3.30.1010.10: no description Gene3D G3DSA:1.10.1070.11: no description SMART SM00146: Phosphoinositide 3-kinase, catalytic domain PANTHER PTHR10048:SF22: PHOSPHATIDYLINOSITOL 4-KINASE BETA PANTHER PTHR10048: PHOSPHATIDYLINOSITOL KINASE SUPERFAMILY SSF56112: Protein kinase-like (PK-like) |
| Bni1p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00498: Formin Homology PANTHER PTHR23213:SF6: CELL DIVISION CONTROL PROTEIN 12-RELATED PANTHER PTHR23213: FORMIN-RELATED SUPERFAMILY SSF101447: Formin homology 2 domain (FH2 domain) Pfam PF02181: FH2 Pfam PF06367: Drf_FH3 Pfam PF06371: Drf_GBD |
| Sec21p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF01602: Adaptin_N Pfam PF08752: Gamma-COP PIR superfamily PIRSF037093: Coatomer, gamma subunit Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:2.60.40.1480: no description Gene3D G3DSA:3.30.310.30: no description SUPERFAMILY SSF49348: Clathrin adaptor appendage domain SUPERFAMILY SSF55711: Subdomain of clathrin and coatomer appendage domain PANTHER PTHR10261:SF0: COATOMER SUBUNIT GAMMA PANTHER PTHR10261: COATOMER SUBUNIT GAMMA |
| Caf40p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description Pfam PF04078: Rcd1 PANTHER PTHR12262:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12262: UNCHARACTERIZED |
| Mon2p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR10663:SF22: YNL297C (AEL204CP) PANTHER PTHR10663: GUANYL-NUCLEOTIDE EXCHANGE FACTOR Pfam PF12783: Sec7_N |
| Vps27p | Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF48464: ENTH/VHS domain SUPERFAMILY SSF57903: FYVE/PHD zinc finger SMART SM00288: Domain present in VPS-27, Hrs and STAM SMART SM00064: Protein present in Fab1, YOTB, Vac1, and EEA SMART SM00726: Ubiquitin-interacting motif. Gene3D G3DSA:1.25.40.90: no description PIR superfamily PIRSF036956: Ubiquitin binding protein, Hrs/Vps27 type PANTHER PTHR13856:SF8: VACUOLAR PROTEIN SORTING-ASSOCIATED (VPS27) PANTHER PTHR13856: VHS DOMAIN CONTAINING PROTEIN FAMILY Pfam PF00790: VHS Pfam PF01363: FYVE |
| Hrd1p | Pfam PF13639: zf-RING_2 Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
PANTHER PTHR12477:SF7: SYNOVIOLIN-RELATED PANTHER PTHR12477: SYNOVIOLIN-RELATED SMART SM00184: Ring finger |
| Psh1p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
PANTHER PTHR25462:SF189: PREDICTED: HYPOTHETICAL PROTEIN, PARTIAL PANTHER PTHR25462: FAMILY NOT NAMED SMART SM00184: Ring finger Pfam PF13923: zf-C3HC4_2 |
| Hrt1p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR11210:SF2: RING FINGER 1 PANTHER PTHR11210: RING FINGER Pfam PF12678: zf-rbx1 |
| Rtc1p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
SMART SM00320: WD40 repeats SUPERFAMILY SSF50978: WD40 repeat-like Gene3D G3DSA:2.130.10.10: no description Pfam PF00400: WD40 PANTHER PTHR22850:SF4: PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR PANTHER PTHR22850: WD40 REPEAT FAMILY |
| Rts1p | SUPERFAMILY SSF48371: ARM repeat |
PIR superfamily PIRSF028043: Serine/threonine-protein phosphatase 2A, subunit B56 Pfam PF01603: B56 PANTHER PTHR10257:SF3: SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B PANTHER PTHR10257: SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B |
| She4p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description Pfam PF11701: UNC45-central PANTHER PTHR22904:SF60: SUBFAMILY NOT NAMED PANTHER PTHR22904: TPR REPEAT CONTAINING PROTEIN |
| Yng1p | Gene3D G3DSA:3.30.40.10: no description |
Pfam PF00628: PHD SUPERFAMILY SSF57903: FYVE/PHD zinc finger PANTHER PTHR10333: INHIBITOR OF GROWTH PROTEIN SMART SM00249: PHD zinc finger |
| Cex1p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR12984:SF3: SCY1(YEAST) PROTEIN KINASE-LIKE PANTHER PTHR12984: SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| Nfi1p | Gene3D G3DSA:3.30.40.10: no description SUPERFAMILY SSF57850: RING/U-box |
Pfam PF14324: PINIT Pfam PF02891: zf-MIZ Pfam PF02037: SAP PANTHER PTHR10782:SF13: E3 SUMO-PROTEIN LIGASE PANTHER PTHR10782: ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN Gene3D G3DSA:1.10.720.30: no description SMART SM00513: Putative DNA-binding (bihelical) motif predi SUPERFAMILY SSF68906: SAP domain |
| Mtr10p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00913: Importin-beta N-terminal domain Pfam PF08389: Xpo1 PANTHER PTHR12363:SF14: SUBFAMILY NOT NAMED PANTHER PTHR12363: TRANSPORTIN 3 AND IMPORTIN 13 |
| Uls1p | SUPERFAMILY SSF57850: RING/U-box Gene3D G3DSA:3.30.40.10: no description |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases SMART SM00487: DEAD-like helicases superfamily SMART SM00184: Ring finger SMART SM00490: helicase superfamily c-terminal domain Pfam PF00176: SNF2_N Pfam PF00271: Helicase_C Gene3D G3DSA:3.40.50.300: no description PANTHER PTHR10799:SF231: SUBFAMILY NOT NAMED PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED |
| Cin1p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12658: BETA-TUBULIN COFACTOR D |
| Rrp12p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR21576:SF2: UNCHARACTERIZED NODULIN-LIKE PROTEIN PANTHER PTHR21576: UNCHARACTERIZED NODULIN-LIKE PROTEIN Pfam PF08161: NUC173 |
| Mot1p | SUPERFAMILY SSF48371: ARM repeat |
SMART SM00487: DEAD-like helicases superfamily SMART SM00490: helicase superfamily c-terminal domain PANTHER PTHR10799:SF225: TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172 PANTHER PTHR10799: SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases Pfam PF12054: DUF3535 Pfam PF00176: SNF2_N Pfam PF00271: Helicase_C Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:3.40.50.300: no description |
| Kap120p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR10997:SF7: IMPORTIN 11 (IMP11) (RAN-BINDING PROTEIN 11) PANTHER PTHR10997: IMPORTIN-7, 8, 11 Gene3D G3DSA:1.25.10.10: no description SMART SM00913: Importin-beta N-terminal domain Pfam PF03810: IBN_N |
| Spp1p | Gene3D G3DSA:3.30.40.10: no description |
PANTHER PTHR12321:SF4: BIP2 PROTEIN PANTHER PTHR12321: CPG BINDING PROTEIN SUPERFAMILY SSF57903: FYVE/PHD zinc finger SMART SM00249: PHD zinc finger Pfam PF00628: PHD |
| Cti6p | Gene3D G3DSA:3.30.40.10: no description |
Pfam PF00628: PHD SUPERFAMILY SSF57903: FYVE/PHD zinc finger PANTHER PTHR16286: MIXED-LINEAGE LEUKEMIA 5, MLL5 SMART SM00249: PHD zinc finger |
| Apl5p | SUPERFAMILY SSF48371: ARM repeat |
Gene3D G3DSA:1.25.10.10: no description PANTHER PTHR22781:SF10: DELTA-ADAPTIN PANTHER PTHR22781: DELTA ADAPTIN-RELATED Pfam PF01602: Adaptin_N PIR superfamily PIRSF037092: Adaptor protein complex AP-3, delta subunit |
| New1p | SUPERFAMILY SSF48371: ARM repeat |
SUPERFAMILY SSF52540: P-loop containing nucleoside triphosphate hydrolases PANTHER PTHR19211:SF5: ELONGATION FACTOR 3 PANTHER PTHR19211: ATP-BINDING TRANSPORT PROTEIN-RELATED Pfam PF00005: ABC_tran Pfam PF00385: Chromo SMART SM00382: ATPases associated with a variety of cellula SMART SM00298: Chromatin organization modifier domain Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:3.40.50.300: no description Gene3D G3DSA:2.40.50.40: no description |
| Apl4p | SUPERFAMILY SSF48371: ARM repeat |
SUPERFAMILY SSF49348: Clathrin adaptor appendage domain SMART SM00809: Adaptin C-terminal domain Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:2.60.40.1230: no description PANTHER PTHR22780:SF5: ADAPTER-RELATED PROTEIN COMPLEX 1 GAMMA SUBUNIT (GAMMA-ADAPTIN) PANTHER PTHR22780: ADAPTIN, ALPHA/GAMMA/EPSILON Pfam PF01602: Adaptin_N Pfam PF02883: Alpha_adaptinC2 PIR superfamily PIRSF037094: Adaptor protein complex AP-1, gamma subunit |
| Nto1p | Gene3D G3DSA:3.30.40.10: no description |
Pfam PF13832: zf-HC5HC2H_2 Pfam PF13831: PHD_2 Pfam PF10513: EPL1 SUPERFAMILY SSF57903: FYVE/PHD zinc finger SMART SM00249: PHD zinc finger PANTHER PTHR13793:SF39: PHD-FINGER, PUTATIVE PANTHER PTHR13793: PHD FINGER PROTEINS |
| Vma13p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR10698:SF0: V-TYPE PROTON ATPASE SUBUNIT H PANTHER PTHR10698: V-TYPE PROTON ATPASE SUBUNIT H Pfam PF03224: V-ATPase_H_N Pfam PF11698: V-ATPase_H_C Gene3D G3DSA:1.25.10.10: no description Gene3D G3DSA:1.25.40.150: no description PIR superfamily PIRSF032184: Vacuolar ATP synthase, subunit H |
| Tif5p | SUPERFAMILY SSF48371: ARM repeat |
Pfam PF01873: eIF-5_eIF-2B Pfam PF02020: W2 SUPERFAMILY SSF100966: Translation initiation factor 2 beta, aIF2beta, N-terminal domain SUPERFAMILY SSF75689: Zinc-binding domain of translation initiation factor 2 beta Gene3D G3DSA:3.30.30.50: no description Gene3D G3DSA:1.25.40.180: no description PANTHER PTHR23001:SF1: EUKARYOTIC TRANSLATION INITIATION FACTOR 5 PANTHER PTHR23001: EUKARYOTIC TRANSLATION INITIATION FACTOR SMART SM00653: domain present in translation initiation fac SMART SM00515: Domain at the C-termini of GCD6, eIF-2B epsi |
| Puf2p | SUPERFAMILY SSF48371: ARM repeat |
PANTHER PTHR12537:SF18: JSN1 PROTEIN (PUF1 PROTEIN) PANTHER PTHR12537: RNA BINDING PROTEIN PUMILIO-RELATED Gene3D G3DSA:3.30.70.330: no description Gene3D G3DSA:1.25.10.10: no description SUPERFAMILY SSF54928: RNA-binding domain, RBD Pfam PF00806: PUF Pfam PF00076: RRM_1 SMART SM00360: RNA recognition motif SMART SM00025: Pumilio-like repeats |
| Asr1p | Gene3D G3DSA:3.30.40.10: no description Pfam PF13639: zf-RING_2 SUPERFAMILY SSF57850: RING/U-box |
SMART SM00184: Ring finger SUPERFAMILY SSF57903: FYVE/PHD zinc finger PANTHER PTHR22764:SF27: ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN PANTHER PTHR22764: RING FINGER PROTEIN 11 (SID 1669) (NEDD4 WW DOMAIN-BINDING PROTEIN 2). |
This table lists domains/motifs that are unique to Rkr1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Rkr1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Rkr1p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR12389 | ZINC FINGER PROTEIN 294 |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Rkr1p .
