TOM40/YMR203W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Tom40p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Tom40p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tom40p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Tom40p
Protein	Motifs in common with Tom40p	Other motifs in this protein (but not in Tom40p )
Por2p	Pfam PF01459: Porin_3 Gene3D G3DSA:2.40.160.10: no description	PRINTS PR00185: EUKARYTPORIN PANTHER PTHR11743:SF6: VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 2 PANTHER PTHR11743: VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL
Por1p	Pfam PF01459: Porin_3 Gene3D G3DSA:2.40.160.10: no description	PRINTS PR00185: EUKARYTPORIN PANTHER PTHR11743:SF6: VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 2 PANTHER PTHR11743: VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL

Unique domains/motifs

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This table lists domains/motifs that are unique to Tom40p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tom40p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Tom40p
Database source	Accession number	Description
PANTHER	PTHR10802	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40
PANTHER	PTHR10802:SF2	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40
TIGRFAMs	TIGR00989	3a0801s07tom40: mitochondrial import receptor subu

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Tom40p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Tom40p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Tom40p .