This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Srt1p domain/motif information see the external links section.

Click on image for expanded interactive view

This table lists proteins that share domains/motifs in common with those found in Srt1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Srt1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Srt1p
Protein	Motifs in common with Srt1p	Other motifs in this protein (but not in Srt1p )
Rer2p	TIGRFAMs TIGR00055: uppS: di-trans,poly-cis-decaprenylcistransferase Pfam PF01255: Prenyltransf SUPERFAMILY SSF64005: Undecaprenyl diphosphate synthase Gene3D G3DSA:3.40.1180.10: no description PANTHER PTHR10291: DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE	none
Nus1p	Gene3D G3DSA:3.40.1180.10: no description SUPERFAMILY SSF64005: Undecaprenyl diphosphate synthase	PANTHER PTHR21528:SF0: SUBFAMILY NOT NAMED PANTHER PTHR21528: UNCHARACTERIZED

This table lists domains/motifs that are unique to Srt1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Srt1p domain/motif information see the external links section.

Last updated on 2013-05-06

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)
	36 - 58

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

Predicted Signal Peptide(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)
	1 - 53

The following external links can be used to directly search external databases for domain/motif information for Srt1p .