BUB2/YMR055C Domains/Motifs and Signal Peptides 
To directly search external databases for Bub2p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Bub2p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Bub2p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Bub2p | ||
|---|---|---|
| Protein | Motifs in common with Bub2p | Other motifs in this protein (but not in Bub2p ) |
| Gyp7p | SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable Gene3D G3DSA:1.10.8.270: no description SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Pfam PF00566: RabGAP-TBC |
PANTHER PTHR22957:SF34: TBC1 DOMAIN FAMILY MEMBER 15, 17 |
| Gyp8p | Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p |
PANTHER PTHR20913:SF1: GTPASE-ACTIVATING PROTEIN GYP8 PANTHER PTHR20913: TBC1 DOMAIN FAMILY MEMBER 20/GTPASE |
| Mdr1p | PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable Gene3D G3DSA:1.10.8.270: no description |
PANTHER PTHR22957:SF48: GTPASE-ACTIVATING PROTEIN GYP2 Pfam PF02893: GRAM Pfam PF13405: EF_hand_4 SUPERFAMILY SSF47473: EF-hand SMART SM00568: domain in glucosyltransferases, myotubularin Gene3D G3DSA:1.10.238.10: no description |
| Oca5p | SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable |
none |
| Gyp6p | Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p |
PANTHER PTHR22957:SF16: GB DEF: GTPASE-ACTIVATING PROTEIN GYP6 (GAP FOR YPT6) |
| Gyl1p | SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC |
PANTHER PTHR22957:SF91: TBC DOMAIN CONTAINING PROTEIN |
| Msb3p | Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
PANTHER PTHR22957:SF54: GH REGULATED TBC PROTEIN-1 |
| Msb4p | PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC |
PANTHER PTHR22957:SF54: GH REGULATED TBC PROTEIN-1 |
| Gyp1p | PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable Gene3D G3DSA:1.10.8.270: no description |
PANTHER PTHR22957:SF26: TBC1 DOMAIN FAMILY MEMBER 22A |
| Gyp5p | PANTHER PTHR22957: TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Gene3D G3DSA:1.10.8.270: no description Pfam PF00566: RabGAP-TBC SUPERFAMILY SSF47923: Ypt/Rab-GAP domain of gyp1p SMART SM00164: Domain in Tre-2, BUB2p, and Cdc16p. Probable |
PANTHER PTHR22957:SF99: SUBFAMILY NOT NAMED |
This table lists domains/motifs that are unique to Bub2p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Bub2p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Bub2p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR22957:SF85 | SUBFAMILY NOT NAMED |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
| Predicted Transmembane Domain(s) (Click on image for expanded interactive view) | Amino Acid Coordinate(s) |
|---|---|
| 230 - 248 |
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Bub2p .
