This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ogg1p domain/motif information see the external links section.

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This table lists proteins that share domains/motifs in common with those found in Ogg1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ogg1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Ogg1p
Protein	Motifs in common with Ogg1p	Other motifs in this protein (but not in Ogg1p )
Ntg1p	SUPERFAMILY SSF48150: DNA-glycosylase Pfam PF00730: HhH-GPD Gene3D G3DSA:1.10.340.30: no description Gene3D G3DSA:1.10.1670.10: no description SMART SM00478: endonuclease III	PANTHER PTHR10359:SF16: ENDONUCLEASE III PANTHER PTHR10359: A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III Pfam PF00633: HHH
Mag1p	SMART SM00478: endonuclease III Gene3D G3DSA:1.10.340.30: no description Gene3D G3DSA:1.10.1670.10: no description SUPERFAMILY SSF48150: DNA-glycosylase Pfam PF00730: HhH-GPD	PANTHER PTHR31628: FAMILY NOT NAMED
Spt15p	SUPERFAMILY SSF55945: TATA-box binding protein-like	PRINTS PR00686: TIFACTORIID Pfam PF00352: TBP PANTHER PTHR10126: TATA-BOX BINDING PROTEIN Gene3D G3DSA:3.30.310.10: no description
Ntg2p	Gene3D G3DSA:1.10.340.30: no description Gene3D G3DSA:1.10.1670.10: no description SUPERFAMILY SSF48150: DNA-glycosylase Pfam PF00730: HhH-GPD SMART SM00478: endonuclease III	PANTHER PTHR10359:SF16: ENDONUCLEASE III PANTHER PTHR10359: A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III SMART SM00525: no description

This table lists domains/motifs that are unique to Ogg1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ogg1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Ogg1p
Database source	Accession number	Description
Gene3D	G3DSA:3.30.310.40	no description
PANTHER	PTHR10242	N-GLYCOSYLASE/DNA LYASE
PANTHER	PTHR10242:SF0	N-GLYCOSYLASE/DNA LYASE
Pfam	PF07934	OGG_N
TIGRFAMs	TIGR00588	ogg: 8-oxoguanine DNA-glycosylase (ogg)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

The following external links can be used to directly search external databases for domain/motif information for Ogg1p .