RPL26A/YLR344W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rpl26ap domain/motif information see the external links section.

Proteome Browser

Jump to: Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

Click on image for expanded interactive view

Shared domains/motifs

Jump to: top | Unique domains | Transmembrane domains | Signal peptide(s)

This table lists proteins that share domains/motifs in common with those found in Rpl26ap , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl26ap domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rpl26ap
Protein	Motifs in common with Rpl26ap	Other motifs in this protein (but not in Rpl26ap )
Rpl21ap	SUPERFAMILY SSF50104: Translation proteins SH3-like domain	PANTHER PTHR20981:SF0: SUBFAMILY NOT NAMED PANTHER PTHR20981: 60S RIBOSOMAL PROTEIN L21 Gene3D G3DSA:2.30.30.70: no description Pfam PF01157: Ribosomal_L21e
Img1p	SUPERFAMILY SSF50104: Translation proteins SH3-like domain	Pfam PF01245: Ribosomal_L19 PANTHER PTHR15680:SF4: SUBFAMILY NOT NAMED PANTHER PTHR15680: RIBOSOMAL PROTEIN L19
Rpl27bp	Gene3D G3DSA:2.30.30.30: no description	Pfam PF01777: Ribosomal_L27e ProDom PD009396: Q3E773_YEAST_Q3E773; PANTHER PTHR10497:SF0: 60S RIBOSOMAL PROTEIN L27 PANTHER PTHR10497: 60S RIBOSOMAL PROTEIN L27
Hyp2p	Gene3D G3DSA:2.30.30.30: no description Pfam PF00467: KOW SUPERFAMILY SSF50104: Translation proteins SH3-like domain	Gene3D G3DSA:2.40.50.140: no description TIGRFAMs TIGR00037: eIF_5A: translation elongation factor IF5A Pfam PF01287: eIF-5a PANTHER PTHR11673: TRANSLATION INITIATION FACTOR 5A-RELATED SUPERFAMILY SSF50249: Nucleic acid-binding proteins PIR superfamily PIRSF003025: Translation initiation factor eIF-5A
Rml2p	Gene3D G3DSA:2.30.30.30: no description SUPERFAMILY SSF50104: Translation proteins SH3-like domain	Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:4.10.950.10: no description Pfam PF03947: Ribosomal_L2_C Pfam PF00181: Ribosomal_L2 PANTHER PTHR13691:SF5: 50S RIBOSOMAL PROTEIN L2 PANTHER PTHR13691: RIBOSOMAL PROTEIN L2 TIGRFAMs TIGR01171: rplB_bact: ribosomal protein L2 SUPERFAMILY SSF50249: Nucleic acid-binding proteins
Rpl2ap	Gene3D G3DSA:2.30.30.30: no description SUPERFAMILY SSF50104: Translation proteins SH3-like domain	PANTHER PTHR13691:SF4: 60S RIBOSOMAL PROTEIN L8 PANTHER PTHR13691: RIBOSOMAL PROTEIN L2 Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:4.10.950.10: no description Pfam PF03947: Ribosomal_L2_C Pfam PF00181: Ribosomal_L2 SUPERFAMILY SSF50249: Nucleic acid-binding proteins PIR superfamily PIRSF002158: Ribosomal protein, L2p/L2a/L8e/organellar L2 types
Rpl26bp	Pfam PF00467: KOW TIGRFAMs TIGR01080: rplX_A_E: ribosomal protein L24 Gene3D G3DSA:2.30.30.30: no description PANTHER PTHR11143: 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER SUPERFAMILY SSF50104: Translation proteins SH3-like domain	none
Rpl14bp	Gene3D G3DSA:2.30.30.30: no description Pfam PF00467: KOW	PANTHER PTHR11127:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11127: 60S RIBOSOMAL PROTEIN L14 Pfam PF01929: Ribosomal_L14e
Rpl27ap	Gene3D G3DSA:2.30.30.30: no description	PANTHER PTHR10497: 60S RIBOSOMAL PROTEIN L27 ProDom PD009396: Q3E773_YEAST_Q3E773; Pfam PF01777: Ribosomal_L27e
Rps4bp	Pfam PF00467: KOW	PANTHER PTHR11581:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11581: 30S/40S RIBOSOMAL PROTEIN S4 PIR superfamily PIRSF002116: Ribosomal protein S4a/S4e ProDom PD002667: RS4_YEAST_P05753; Pfam PF00900: Ribosomal_S4e Pfam PF08071: RS4NT Pfam PF01479: S4 SMART SM00363: S4 RNA-binding domain
Rpl2bp	SUPERFAMILY SSF50104: Translation proteins SH3-like domain Gene3D G3DSA:2.30.30.30: no description	PANTHER PTHR13691:SF4: 60S RIBOSOMAL PROTEIN L8 PANTHER PTHR13691: RIBOSOMAL PROTEIN L2 Pfam PF03947: Ribosomal_L2_C Pfam PF00181: Ribosomal_L2 SUPERFAMILY SSF50249: Nucleic acid-binding proteins PIR superfamily PIRSF002158: Ribosomal protein, L2p/L2a/L8e/organellar L2 types Gene3D G3DSA:2.40.50.140: no description Gene3D G3DSA:4.10.950.10: no description
Anb1p	Gene3D G3DSA:2.30.30.30: no description SUPERFAMILY SSF50104: Translation proteins SH3-like domain Pfam PF00467: KOW	TIGRFAMs TIGR00037: eIF_5A: translation elongation factor IF5A PIR superfamily PIRSF003025: Translation initiation factor eIF-5A PANTHER PTHR11673: TRANSLATION INITIATION FACTOR 5A-RELATED Gene3D G3DSA:2.40.50.140: no description SUPERFAMILY SSF50249: Nucleic acid-binding proteins Pfam PF01287: eIF-5a
Rps4ap	Pfam PF00467: KOW	PIR superfamily PIRSF002116: Ribosomal protein S4a/S4e Pfam PF00900: Ribosomal_S4e Pfam PF08071: RS4NT Pfam PF01479: S4 PANTHER PTHR11581:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11581: 30S/40S RIBOSOMAL PROTEIN S4 ProDom PD002667: RS4_YEAST_P05753; SMART SM00363: S4 RNA-binding domain
Rpl14ap	Pfam PF00467: KOW Gene3D G3DSA:2.30.30.30: no description	Pfam PF01929: Ribosomal_L14e PANTHER PTHR11127:SF0: SUBFAMILY NOT NAMED PANTHER PTHR11127: 60S RIBOSOMAL PROTEIN L14
Rpl6bp	Gene3D G3DSA:2.30.30.30: no description	Pfam PF01159: Ribosomal_L6e PANTHER PTHR10715: 60S RIBOSOMAL PROTEIN L6
Spt5p	Pfam PF00467: KOW SUPERFAMILY SSF50104: Translation proteins SH3-like domain	Pfam PF03439: Spt5-NGN Pfam PF11942: Spt5_N PANTHER PTHR11125:SF7: SUBFAMILY NOT NAMED PANTHER PTHR11125: SUPPRESSOR OF TY 5 SMART SM00738: In Spt5p, this domain may confer affinity fo SMART SM00739: KOW (Kyprides, Ouzounis, Woese) motif. SMART SM01104: Spt5 C-terminal nonapeptide repeat binding S PIR superfamily PIRSF036945: Transcription elongation factor Spt5
Rpl6ap	Gene3D G3DSA:2.30.30.30: no description	Pfam PF01159: Ribosomal_L6e PANTHER PTHR10715: 60S RIBOSOMAL PROTEIN L6
Rpl21bp	SUPERFAMILY SSF50104: Translation proteins SH3-like domain	Gene3D G3DSA:2.30.30.70: no description Pfam PF01157: Ribosomal_L21e PANTHER PTHR20981:SF0: SUBFAMILY NOT NAMED PANTHER PTHR20981: 60S RIBOSOMAL PROTEIN L21
Mrpl40p	Gene3D G3DSA:2.30.30.30: no description	SMART SM00739: KOW (Kyprides, Ouzounis, Woese) motif.

Unique domains/motifs

Jump to: top | Shared domains | Transmembrane domains | Signal peptide(s)

This table lists domains/motifs that are unique to Rpl26ap . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rpl26ap domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rpl26ap .

Transmembrane Domains

Jump to: top | Shared domains | Unique domains | Signal peptide(s)

This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rpl26ap .

Signal Peptide(s)

Jump to: top | Shared domains | Unique domains | Transmembrane domains

This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rpl26ap .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Rpl26ap .