VRP1/YLR337C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Vrp1p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Vrp1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vrp1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Vrp1p
Protein	Motifs in common with Vrp1p	Other motifs in this protein (but not in Vrp1p )
Las17p	Pfam PF02205: WH2 PANTHER PTHR23202: WASP INTERACTING PROTEIN-RELATED	Gene3D G3DSA:2.30.29.30: no description SUPERFAMILY SSF50729: PH domain-like Pfam PF00568: WH1 SMART SM00461: WASP homology region PANTHER PTHR23202:SF2: WISKOTT-ALDRICH SYNDROME HOMOLOG PROTEIN 1

Unique domains/motifs

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This table lists domains/motifs that are unique to Vrp1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Vrp1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Vrp1p
Database source	Accession number	Description
PANTHER	PTHR23202:SF3	VERPROLIN
SMART	SM00246	Wiskott Aldrich syndrome homology region

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Vrp1p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Vrp1p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Vrp1p .