RPS30A/YLR287C-A Domains/Motifs and Signal Peptides Help

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Rps30ap domain/motif information see the external links section.

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Shared domains/motifs
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This table lists proteins that share domains/motifs in common with those found in Rps30ap , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rps30ap domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Rps30ap
Protein Motifs in common with Rps30ap Other motifs in this protein (but not in Rps30ap )
Rps30bp PANTHER PTHR12650:SF8: SUBFAMILY NOT NAMED
PANTHER PTHR12650: 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI
Pfam PF04758: Ribosomal_S30
 none

Unique domains/motifs
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This table lists domains/motifs that are unique to Rps30ap . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Rps30ap domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Rps30ap .

Transmembrane Domains
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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Rps30ap .

Signal Peptide(s)
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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Rps30ap .

External Links
Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)


The following external links can be used to directly search external databases for domain/motif information for Rps30ap .