FRE1/YLR214W Domains/Motifs and Signal Peptides 
To directly search external databases for Fre1p domain/motif information see the external links section.
| Click on image for expanded interactive view |
|---|
This table lists proteins that share domains/motifs in common with those found in Fre1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Fre1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Fre1p | ||
|---|---|---|
| Protein | Motifs in common with Fre1p | Other motifs in this protein (but not in Fre1p ) |
| Met10p | Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain |
Gene3D G3DSA:3.40.50.920: no description Gene3D G3DSA:3.40.920.10: no description Gene3D G3DSA:2.40.30.10: no description Gene3D G3DSA:1.20.990.10: no description SUPERFAMILY SSF63380: Riboflavin synthase domain-like SUPERFAMILY SSF53323: Pyruvate-ferredoxin oxidoreductase, PFOR, domain III SUPERFAMILY SSF52922: TK C-terminal domain-like PRINTS PR00371: FPNCR Pfam PF00667: FAD_binding_1 Pfam PF00175: NAD_binding_1 PANTHER PTHR19384:SF16: SULFITE REDUCTASE PANTHER PTHR19384: FLAVODOXIN-RELATED |
| Aim14p | Gene3D G3DSA:3.40.50.80: no description Pfam PF08030: NAD_binding_6 Pfam PF01794: Ferric_reduct Pfam PF08022: FAD_binding_8 |
PANTHER PTHR11972:SF14: SUBFAMILY NOT NAMED PANTHER PTHR11972: NADPH OXIDASE |
| Yhb1p | Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain |
Gene3D G3DSA:1.10.490.10: no description Gene3D G3DSA:2.40.30.10: no description Pfam PF00970: FAD_binding_6 Pfam PF00042: Globin Pfam PF00175: NAD_binding_1 SUPERFAMILY SSF46458: Globin-like SUPERFAMILY SSF63380: Riboflavin synthase domain-like PANTHER PTHR22924: LEGHEMOGLOBIN-RELATED |
| Ncp1p | SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain Gene3D G3DSA:3.40.50.80: no description |
PANTHER PTHR19384: FLAVODOXIN-RELATED SUPERFAMILY SSF63380: Riboflavin synthase domain-like SUPERFAMILY SSF52218: Flavoproteins Gene3D G3DSA:3.40.50.360: no description Gene3D G3DSA:2.40.30.10: no description Gene3D G3DSA:1.20.990.10: no description Pfam PF00667: FAD_binding_1 Pfam PF00258: Flavodoxin_1 Pfam PF00175: NAD_binding_1 PRINTS PR00371: FPNCR PRINTS PR00369: FLAVODOXIN |
| Cbr1p | Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain |
PANTHER PTHR19370:SF6: GB DEF: PUTATIVE NADH-CYTOCHROME B5 REDUCTASE (EC 1.6.2.2) (P35) PANTHER PTHR19370: NADH-CYTOCHROME B5 REDUCTASE Gene3D G3DSA:2.40.30.10: no description PRINTS PR00406: CYTB5RDTASE PRINTS PR00371: FPNCR Pfam PF00175: NAD_binding_1 Pfam PF00970: FAD_binding_6 SUPERFAMILY SSF63380: Riboflavin synthase domain-like |
| Mcr1p | Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain |
Gene3D G3DSA:2.40.30.10: no description Pfam PF00175: NAD_binding_1 Pfam PF00970: FAD_binding_6 SUPERFAMILY SSF63380: Riboflavin synthase domain-like PANTHER PTHR19370:SF8: SUBFAMILY NOT NAMED PANTHER PTHR19370: NADH-CYTOCHROME B5 REDUCTASE PRINTS PR00406: CYTB5RDTASE PRINTS PR00371: FPNCR |
| Fre2p | Pfam PF08030: NAD_binding_6 Pfam PF08022: FAD_binding_8 Pfam PF01794: Ferric_reduct Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain PANTHER PTHR32361: FAMILY NOT NAMED |
Gene3D G3DSA:2.40.30.10: no description SUPERFAMILY SSF63380: Riboflavin synthase domain-like PANTHER PTHR32361:SF0: SUBFAMILY NOT NAMED |
| Fre6p | Gene3D G3DSA:3.40.50.80: no description Pfam PF08022: FAD_binding_8 Pfam PF08030: NAD_binding_6 Pfam PF01794: Ferric_reduct PANTHER PTHR32361: FAMILY NOT NAMED SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain |
PANTHER PTHR32361:SF0: SUBFAMILY NOT NAMED |
| Fre8p | SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain Pfam PF01794: Ferric_reduct |
PANTHER PTHR11972:SF18: SUBFAMILY NOT NAMED PANTHER PTHR11972: NADPH OXIDASE |
| Aim33p | Gene3D G3DSA:3.40.50.80: no description SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain |
Pfam PF00970: FAD_binding_6 Pfam PF00175: NAD_binding_1 Gene3D G3DSA:2.40.30.10: no description PRINTS PR00406: CYTB5RDTASE PRINTS PR00371: FPNCR PANTHER PTHR19370:SF12: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR19370: NADH-CYTOCHROME B5 REDUCTASE SUPERFAMILY SSF63380: Riboflavin synthase domain-like |
| Pga3p | SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain Gene3D G3DSA:3.40.50.80: no description |
SUPERFAMILY SSF63380: Riboflavin synthase domain-like PRINTS PR00406: CYTB5RDTASE PRINTS PR00371: FPNCR Pfam PF00970: FAD_binding_6 Pfam PF00175: NAD_binding_1 Gene3D G3DSA:2.40.30.10: no description PANTHER PTHR19370:SF12: PUTATIVE UNCHARACTERIZED PROTEIN PANTHER PTHR19370: NADH-CYTOCHROME B5 REDUCTASE |
| Fre4p | Pfam PF08030: NAD_binding_6 Pfam PF08022: FAD_binding_8 Pfam PF01794: Ferric_reduct SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain PANTHER PTHR32361: FAMILY NOT NAMED Gene3D G3DSA:3.40.50.80: no description |
SUPERFAMILY SSF63380: Riboflavin synthase domain-like PANTHER PTHR32361:SF0: SUBFAMILY NOT NAMED |
| Fre7p | Gene3D G3DSA:3.40.50.80: no description Pfam PF08030: NAD_binding_6 Pfam PF08022: FAD_binding_8 Pfam PF01794: Ferric_reduct |
Gene3D G3DSA:2.40.30.10: no description PANTHER PTHR11972:SF14: SUBFAMILY NOT NAMED PANTHER PTHR11972: NADPH OXIDASE SUPERFAMILY SSF63380: Riboflavin synthase domain-like |
| Cyc2p | Gene3D G3DSA:3.40.50.80: no description |
Pfam PF00970: FAD_binding_6 Gene3D G3DSA:2.40.30.10: no description SUPERFAMILY SSF63380: Riboflavin synthase domain-like |
| Fre3p | SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain Pfam PF08030: NAD_binding_6 Pfam PF08022: FAD_binding_8 Pfam PF01794: Ferric_reduct Gene3D G3DSA:3.40.50.80: no description PANTHER PTHR32361: FAMILY NOT NAMED |
SUPERFAMILY SSF63380: Riboflavin synthase domain-like Gene3D G3DSA:2.40.30.10: no description PANTHER PTHR32361:SF0: SUBFAMILY NOT NAMED |
| Fre5p | SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain Gene3D G3DSA:3.40.50.80: no description Pfam PF08022: FAD_binding_8 Pfam PF08030: NAD_binding_6 Pfam PF01794: Ferric_reduct |
SUPERFAMILY SSF63380: Riboflavin synthase domain-like PANTHER PTHR11972:SF15: SUBFAMILY NOT NAMED PANTHER PTHR11972: NADPH OXIDASE |
| Tah18p | SUPERFAMILY SSF52343: Ferredoxin reductase-like, C-terminal NADP-linked domain Gene3D G3DSA:3.40.50.80: no description |
PRINTS PR00371: FPNCR PRINTS PR00369: FLAVODOXIN SUPERFAMILY SSF63380: Riboflavin synthase domain-like SUPERFAMILY SSF52218: Flavoproteins Gene3D G3DSA:3.40.50.360: no description Gene3D G3DSA:2.40.30.10: no description Gene3D G3DSA:1.20.990.10: no description Pfam PF00667: FAD_binding_1 Pfam PF00258: Flavodoxin_1 Pfam PF00175: NAD_binding_1 PANTHER PTHR19384:SF9: NADPH FAD OXIDOREDUCTASE PANTHER PTHR19384: FLAVODOXIN-RELATED |
This table lists domains/motifs that are unique to Fre1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Fre1p domain/motif information see the external links section.
Last updated on 2013-05-06
| Domain/motifs that are unique to Fre1p | ||
|---|---|---|
| Database source | Accession number | Description |
| PANTHER | PTHR32361:SF1 | SUBFAMILY NOT NAMED |
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
| Predicted Transmembane Domain(s) (Click on image for expanded interactive view) | Amino Acid Coordinate(s) |
|---|---|
| 7 - 29 | |
| 147 - 169 | |
| 214 - 236 | |
| 260 - 279 | |
| 292 - 314 | |
| 329 - 346 | |
| 367 - 389 |
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
| Predicted Signal Peptide(s) (Click on image for expanded interactive view) | Amino Acid Coordinate(s) |
|---|---|
| 1 - 22 |
The following external links can be used to directly search external databases for domain/motif information for Fre1p .
