HMX1/YLR205C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Hmx1p domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Hmx1p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Hmx1p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Hmx1p
Protein	Motifs in common with Hmx1p	Other motifs in this protein (but not in Hmx1p )
Pet18p	Gene3D G3DSA:1.20.910.10: no description SUPERFAMILY SSF48613: Heme oxygenase-like	PANTHER PTHR25987:SF0: SUBFAMILY NOT NAMED PANTHER PTHR25987: FAMILY NOT NAMED Pfam PF03070: TENA_THI-4
Thi20p	Gene3D G3DSA:1.20.910.10: no description SUPERFAMILY SSF48613: Heme oxygenase-like	Gene3D G3DSA:3.40.1190.20: no description SUPERFAMILY SSF53613: Ribokinase-like TIGRFAMs TIGR04306: salvage_TenA: thiaminase II TIGRFAMs TIGR00097: HMP-P_kinase: phosphomethylpyrimidine kinase PANTHER PTHR20858:SF2: PHOSPHOMETHYLPYRIMIDINE KINASE PANTHER PTHR20858: PHOSPHOMETHYLPYRIMIDINE KINASE Pfam PF08543: Phos_pyr_kin Pfam PF03070: TENA_THI-4
Thi21p	Gene3D G3DSA:1.20.910.10: no description SUPERFAMILY SSF48613: Heme oxygenase-like	TIGRFAMs TIGR04306: salvage_TenA: thiaminase II TIGRFAMs TIGR00097: HMP-P_kinase: phosphomethylpyrimidine kinase Gene3D G3DSA:3.40.1190.20: no description SUPERFAMILY SSF53613: Ribokinase-like PANTHER PTHR20858:SF2: PHOSPHOMETHYLPYRIMIDINE KINASE PANTHER PTHR20858: PHOSPHOMETHYLPYRIMIDINE KINASE Pfam PF08543: Phos_pyr_kin Pfam PF03070: TENA_THI-4
Thi22p	Gene3D G3DSA:1.20.910.10: no description SUPERFAMILY SSF48613: Heme oxygenase-like	PANTHER PTHR20858:SF2: PHOSPHOMETHYLPYRIMIDINE KINASE PANTHER PTHR20858: PHOSPHOMETHYLPYRIMIDINE KINASE Gene3D G3DSA:3.40.1190.20: no description TIGRFAMs TIGR04306: salvage_TenA: thiaminase II TIGRFAMs TIGR00097: HMP-P_kinase: phosphomethylpyrimidine kinase Pfam PF08543: Phos_pyr_kin Pfam PF03070: TENA_THI-4 SUPERFAMILY SSF53613: Ribokinase-like

Unique domains/motifs

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This table lists domains/motifs that are unique to Hmx1p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Hmx1p domain/motif information see the external links section.

Last updated on 2013-05-06

Domain/motifs that are unique to Hmx1p
Database source	Accession number	Description
PIR superfamily	PIRSF000343	Heme oxygenase (decyclizing)
PANTHER	PTHR10720	HEME OXYGENASE
PANTHER	PTHR10720:SF0	HEME OXYGENASE
Pfam	PF01126	Heme_oxygenase

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	288 - 310

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Hmx1p .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Hmx1p .