SWI6/YLR182W Domains/Motifs and Signal Peptides 
To directly search external databases for Swi6p domain/motif information see the external links section.
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This table lists proteins that share domains/motifs in common with those found in Swi6p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Swi6p domain/motif information see the external links section.
Last updated on 2013-05-06
| Other Saccharomyces cerevisiae proteins that contain motifs found in Swi6p | ||
|---|---|---|
| Protein | Motifs in common with Swi6p | Other motifs in this protein (but not in Swi6p ) |
| Swh1p | Pfam PF12796: Ank_2 Gene3D G3DSA:1.25.40.20: no description SUPERFAMILY SSF48403: Ankyrin repeat SMART SM00248: ankyrin repeats |
Pfam PF01237: Oxysterol_BP Pfam PF00023: Ank Pfam PF00169: PH Gene3D G3DSA:2.30.29.30: no description SUPERFAMILY SSF144000: Oxysterol-binding protein-like SUPERFAMILY SSF50729: PH domain-like PANTHER PTHR10972:SF57: SUBFAMILY NOT NAMED PANTHER PTHR10972: OXYSTEROL-BINDING PROTEIN-RELATED SMART SM00233: Pleckstrin homology domain. |
| Ycr051wp | Gene3D G3DSA:1.25.40.20: no description SUPERFAMILY SSF48403: Ankyrin repeat SMART SM00248: ankyrin repeats |
Pfam PF13857: Ank_5 |
| Osh2p | SUPERFAMILY SSF48403: Ankyrin repeat SMART SM00248: ankyrin repeats Gene3D G3DSA:1.25.40.20: no description |
SUPERFAMILY SSF144000: Oxysterol-binding protein-like SUPERFAMILY SSF50729: PH domain-like PANTHER PTHR10972:SF57: SUBFAMILY NOT NAMED PANTHER PTHR10972: OXYSTEROL-BINDING PROTEIN-RELATED SMART SM00233: Pleckstrin homology domain. Pfam PF01237: Oxysterol_BP Pfam PF13857: Ank_5 Pfam PF00169: PH Gene3D G3DSA:2.30.29.30: no description |
| Mbp1p | Gene3D G3DSA:1.25.40.20: no description SMART SM00248: ankyrin repeats SUPERFAMILY SSF48403: Ankyrin repeat |
Gene3D G3DSA:3.10.260.10: no description SUPERFAMILY SSF54616: DNA-binding domain of Mlu1-box binding protein MBP1 Pfam PF13637: Ank_4 Pfam PF00023: Ank Pfam PF04383: KilA-N |
| Vms1p | SUPERFAMILY SSF48403: Ankyrin repeat Gene3D G3DSA:1.25.40.20: no description |
PANTHER PTHR13182: ZINC FINGER PROTEIN 622 |
| Akr1p | SMART SM00248: ankyrin repeats Gene3D G3DSA:1.25.40.20: no description SUPERFAMILY SSF48403: Ankyrin repeat Pfam PF12796: Ank_2 |
PANTHER PTHR24161:SF2: SUBFAMILY NOT NAMED PANTHER PTHR24161: FAMILY NOT NAMED Pfam PF01529: zf-DHHC |
| Swi4p | Gene3D G3DSA:1.25.40.20: no description SMART SM00248: ankyrin repeats SUPERFAMILY SSF48403: Ankyrin repeat |
Pfam PF00023: Ank Pfam PF04383: KilA-N Gene3D G3DSA:3.10.260.10: no description SUPERFAMILY SSF54616: DNA-binding domain of Mlu1-box binding protein MBP1 |
| Ygl242cp | Pfam PF12796: Ank_2 Gene3D G3DSA:1.25.40.20: no description SUPERFAMILY SSF48403: Ankyrin repeat SMART SM00248: ankyrin repeats |
PANTHER PTHR24142:SF3: SUBFAMILY NOT NAMED PANTHER PTHR24142: FAMILY NOT NAMED |
| Nas6p | SUPERFAMILY SSF48403: Ankyrin repeat Gene3D G3DSA:1.25.40.20: no description SMART SM00248: ankyrin repeats Pfam PF12796: Ank_2 |
PANTHER PTHR24199:SF0: SUBFAMILY NOT NAMED PANTHER PTHR24199: FAMILY NOT NAMED PRINTS PR01415: ANKYRIN |
| Pho81p | SMART SM00248: ankyrin repeats Pfam PF12796: Ank_2 Gene3D G3DSA:1.25.40.20: no description SUPERFAMILY SSF48403: Ankyrin repeat |
PANTHER PTHR10783:SF23: SUBFAMILY NOT NAMED PANTHER PTHR10783: XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED Pfam PF03105: SPX Gene3D G3DSA:3.20.20.190: no description |
| Yil001wp | Gene3D G3DSA:1.25.40.20: no description Pfam PF12796: Ank_2 SUPERFAMILY SSF48403: Ankyrin repeat SMART SM00248: ankyrin repeats |
Gene3D G3DSA:3.30.710.10: no description Pfam PF00651: BTB SUPERFAMILY SSF54695: POZ domain PANTHER PTHR24413:SF1: PREDICTED PROTEIN PANTHER PTHR24413: FAMILY NOT NAMED SMART SM00225: Broad-Complex, Tramtrack and Bric a brac |
| Hos4p | Gene3D G3DSA:1.25.40.20: no description Pfam PF12796: Ank_2 SMART SM00248: ankyrin repeats SUPERFAMILY SSF48403: Ankyrin repeat |
PRINTS PR01415: ANKYRIN PANTHER PTHR24188: FAMILY NOT NAMED |
| Mga2p | SMART SM00248: ankyrin repeats SUPERFAMILY SSF48403: Ankyrin repeat Gene3D G3DSA:1.25.40.20: no description Pfam PF12796: Ank_2 |
SMART SM00429: ig-like, plexins, transcription factors SUPERFAMILY SSF81296: E set domains Gene3D G3DSA:2.60.40.10: no description PANTHER PTHR24189: FAMILY NOT NAMED Pfam PF01833: TIG |
| Spt23p | Pfam PF12796: Ank_2 Gene3D G3DSA:1.25.40.20: no description SMART SM00248: ankyrin repeats SUPERFAMILY SSF48403: Ankyrin repeat |
Pfam PF01833: TIG PANTHER PTHR24198: ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN Gene3D G3DSA:2.60.40.10: no description SMART SM00429: ig-like, plexins, transcription factors SUPERFAMILY SSF81296: E set domains |
| Yml002wp | Gene3D G3DSA:1.25.40.20: no description |
PANTHER PTHR22964:SF15: PREDICTED: HYPOTHETICAL PROTEIN PANTHER PTHR22964: MYOSIN LIGHT CHAIN KINASE-RELATED Pfam PF02204: VPS9 SUPERFAMILY SSF140860: Pseudo ankyrin repeat-like SUPERFAMILY SSF109993: VPS9 domain |
| Avo2p | SUPERFAMILY SSF48403: Ankyrin repeat Gene3D G3DSA:1.25.40.20: no description SMART SM00248: ankyrin repeats Pfam PF12796: Ank_2 |
PANTHER PTHR24198: ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN Pfam PF13637: Ank_4 |
| Akr2p | Gene3D G3DSA:1.25.40.20: no description SUPERFAMILY SSF48403: Ankyrin repeat SMART SM00248: ankyrin repeats Pfam PF12796: Ank_2 |
PANTHER PTHR22883: ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN Pfam PF01529: zf-DHHC |
| Gde1p | Gene3D G3DSA:1.25.40.20: no description SMART SM00248: ankyrin repeats SUPERFAMILY SSF48403: Ankyrin repeat Pfam PF12796: Ank_2 |
Gene3D G3DSA:3.20.20.190: no description SUPERFAMILY SSF51695: PLC-like phosphodiesterases PANTHER PTHR22958: RELATED TO MULTIFUNCTIONAL CYCLIN-DEPENDENT KINASE-RELATED Pfam PF03009: GDPD Pfam PF03105: SPX |
| Yar1p | Gene3D G3DSA:1.25.40.20: no description Pfam PF12796: Ank_2 SUPERFAMILY SSF48403: Ankyrin repeat SMART SM00248: ankyrin repeats |
none |
| Ypr089wp | SUPERFAMILY SSF48403: Ankyrin repeat Gene3D G3DSA:1.25.40.20: no description |
none |
This table lists domains/motifs that are unique to Swi6p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.
To directly search external databases for Swi6p domain/motif information see the external links section.
Last updated on 2013-05-06
This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.
This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.
The following external links can be used to directly search external databases for domain/motif information for Swi6p .
