TIS11/YLR136C Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Tis11p domain/motif information see the external links section.

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Tis11p , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tis11p domain/motif information see the external links section.

Last updated on 2013-05-06

Other Saccharomyces cerevisiae proteins that contain motifs found in Tis11p
Protein	Motifs in common with Tis11p	Other motifs in this protein (but not in Tis11p )
Cth1p	SMART SM00356: zinc finger Pfam PF00642: zf-CCCH Gene3D G3DSA:4.10.1000.10: no description SUPERFAMILY SSF90229: CCCH zinc finger PANTHER PTHR12547:SF6: TIS11-RELATED PANTHER PTHR12547: CCCH ZINC FINGER/TIS11-RELATED	none
Cwc24p	SUPERFAMILY SSF90229: CCCH zinc finger Pfam PF00642: zf-CCCH SMART SM00356: zinc finger Gene3D G3DSA:4.10.1000.10: no description	SUPERFAMILY SSF57850: RING/U-box Pfam PF13923: zf-C3HC4_2 SMART SM00184: Ring finger Gene3D G3DSA:3.30.40.10: no description PANTHER PTHR12930: ZINC FINGER PROTEIN 183
Tma46p	SMART SM00356: zinc finger Gene3D G3DSA:4.10.1000.10: no description SUPERFAMILY SSF90229: CCCH zinc finger	PANTHER PTHR12681:SF0: SUBFAMILY NOT NAMED PANTHER PTHR12681: ZINC FINGER-CONTAINING PROTEIN P48ZNF
Lee1p	Gene3D G3DSA:4.10.1000.10: no description SMART SM00356: zinc finger SUPERFAMILY SSF90229: CCCH zinc finger Pfam PF00642: zf-CCCH	PANTHER PTHR11224:SF13: ZINC FINGER PROTEIN LEE1 (YEAST)-RELATED PANTHER PTHR11224: MAKORIN-RELATED
Yth1p	SMART SM00356: zinc finger SUPERFAMILY SSF90229: CCCH zinc finger	PANTHER PTHR23102:SF14: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CLIPPER HOMOLOG) PANTHER PTHR23102: ZINC FINGER (CLIPPER)-RELATED

Unique domains/motifs

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This table lists domains/motifs that are unique to Tis11p . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGRFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Tis11p domain/motif information see the external links section.

Last updated on 2013-05-06

There are no unique domains/motifs predicted for Tis11p .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

There are no transmembrane domains predicted for Tis11p .

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Tis11p .

External Links

Jump to: top | Shared domains | Unique domains | Transmembrane domains | Signal peptide(s)

The following external links can be used to directly search external databases for domain/motif information for Tis11p .